RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	JPH4	Q96JJ6	628 aa		42.73	■■■■■ 4.43
UBE3A-222	ENST00000630907	EHMT2	Q96KQ7	1210 aa		42.67	■■■■■ 4.42
UBE3A-222	ENST00000630907	SHROOM2	Q13796	1616 aa		42.67	■■■■■ 4.42
UBE3A-222	ENST00000630907	GOLGA3	Q08378	1498 aa		42.66	■■■■■ 4.42
UBE3A-222	ENST00000630907	IQGAP2	Q13576	1575 aa		42.65	■■■■■ 4.42
UBE3A-222	ENST00000630907	ARHGEF11	O15085	1522 aa		42.65	■■■■■ 4.42
UBE3A-222	ENST00000630907	CTTNBP2	Q8WZ74	1663 aa		42.61	■■■■■ 4.41
UBE3A-222	ENST00000630907	RIMBP3C	A6NJZ7	1639 aa		42.58	■■■■■ 4.41
UBE3A-222	ENST00000630907	RIMBP3B	A6NNM3	1639 aa		42.58	■■■■■ 4.41
UBE3A-222	ENST00000630907	RIMBP3	Q9UFD9	1639 aa		42.58	■■■■■ 4.41
UBE3A-222	ENST00000630907	PRG4	Q92954	1404 aa	Predicted RBP	42.57	■■■■■ 4.41
UBE3A-222	ENST00000630907	UBTF	P17480	764 aa	Known RBP	42.56	■■■■■ 4.4
UBE3A-222	ENST00000630907	ERCC6L2	Q5T890	1561 aa		42.48	■■■■■ 4.39
UBE3A-222	ENST00000630907	UGGT2	Q9NYU1	1516 aa		42.46	■■■■■ 4.39
UBE3A-222	ENST00000630907	CARMIL2	Q6F5E8	1435 aa		42.39	■■■■■ 4.38
UBE3A-222	ENST00000630907	ARAP1	Q96P48	1450 aa		42.36	■■■■■ 4.37
UBE3A-222	ENST00000630907	DISP1	Q96F81	1524 aa		42.33	■■■■■ 4.37
UBE3A-222	ENST00000630907	CYB5RL	Q6IPT4	315 aa		42.3	■■■■■ 4.36
UBE3A-222	ENST00000630907	RANGAP1	P46060	587 aa	Predicted RBP	42.28	■■■■■ 4.36
UBE3A-222	ENST00000630907	KIAA0556	O60303	1618 aa		42.24	■■■■■ 4.35
UBE3A-222	ENST00000630907	LOC105371045	A0A1W2PR82	267 aa		42.23	■■■■■ 4.35
UBE3A-222	ENST00000630907	TNIK	Q9UKE5	1360 aa		42.23	■■■■■ 4.35
UBE3A-222	ENST00000630907	PTPRG	P23470	1445 aa		42.15	■■■■■ 4.34
UBE3A-222	ENST00000630907	SAMD9	Q5K651	1589 aa		42.14	■■■■■ 4.34
UBE3A-222	ENST00000630907	P3H3	Q8IVL6	736 aa		42.13	■■■■■ 4.33
UBE3A-222	ENST00000630907	TTBK1	Q5TCY1	1321 aa	Predicted RBP	42.13	■■■■■ 4.33
UBE3A-222	ENST00000630907	EFCAB5	A4FU69	1503 aa		42.07	■■■■■ 4.33
UBE3A-222	ENST00000630907	ARHGAP35	Q9NRY4	1499 aa		41.97	■■■■■ 4.31
UBE3A-222	ENST00000630907	FHOD3	Q2V2M9	1422 aa		41.96	■■■■■ 4.31
UBE3A-222	ENST00000630907	CLIP1	P30622	1438 aa		41.92	■■■■■ 4.3
UBE3A-222	ENST00000630907	UACA	Q9BZF9	1416 aa		41.87	■■■■■ 4.29
UBE3A-222	ENST00000630907	CEP162	Q5TB80	1403 aa		41.85	■■■■■ 4.29
UBE3A-222	ENST00000630907	PLB1	Q6P1J6	1458 aa		41.79	■■■■■ 4.28
UBE3A-222	ENST00000630907	ADCY10	Q96PN6	1610 aa		41.79	■■■■■ 4.28
UBE3A-222	ENST00000630907	UHRF1BP1L	A0JNW5	1464 aa		41.79	■■■■■ 4.28
UBE3A-222	ENST00000630907	ABCC2	Q92887	1545 aa		41.75	■■■■■ 4.27
UBE3A-222	ENST00000630907	ABCA8	O94911	1581 aa		41.75	■■■■■ 4.27
UBE3A-222	ENST00000630907	NPM1	P06748	294 aa	Known RBP eCLIP	41.72	■■■■■ 4.27
UBE3A-222	ENST00000630907	FMN1	Q68DA7	1419 aa		41.71	■■■■■ 4.27
UBE3A-222	ENST00000630907	RAPGEF6	Q8TEU7	1601 aa		41.62	■■■■■ 4.25
UBE3A-222	ENST00000630907	KDM5B	Q9UGL1	1544 aa		41.57	■■■■■ 4.25
UBE3A-222	ENST00000630907	NUP153	P49790	1475 aa	Known RBP	41.5	■■■■■ 4.23
UBE3A-222	ENST00000630907	ARID3C	A6NKF2	412 aa		41.5	■■■■■ 4.23
UBE3A-222	ENST00000630907	ATP1B4	Q9UN42	357 aa	Predicted RBP	41.49	■■■■■ 4.23
UBE3A-222	ENST00000630907	ZCCHC11	Q5TAX3	1644 aa	Known RBP	41.46	■■■■■ 4.23
UBE3A-222	ENST00000630907	ATP10B	O94823	1461 aa		41.45	■■■■■ 4.23
UBE3A-222	ENST00000630907	CASKIN1	Q8WXD9	1431 aa		41.44	■■■■■ 4.23
UBE3A-222	ENST00000630907	MAPKBP1	O60336	1514 aa		41.44	■■■■■ 4.22
UBE3A-222	ENST00000630907	HECW1	Q76N89	1606 aa		41.41	■■■■■ 4.22
UBE3A-222	ENST00000630907	PCF11	O94913	1555 aa	Known RBP	41.39	■■■■■ 4.22
UBE3A-222	ENST00000630907	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	41.38	■■■■■ 4.21
UBE3A-222	ENST00000630907	HNRNPUL2	Q1KMD3	747 aa	Known RBP	41.38	■■■■■ 4.21
UBE3A-222	ENST00000630907	ASXL2	Q76L83	1435 aa		41.35	■■■■■ 4.21
UBE3A-222	ENST00000630907	FYCO1	Q9BQS8	1478 aa		41.34	■■■■■ 4.21
UBE3A-222	ENST00000630907	VPS8	Q8N3P4	1428 aa		41.32	■■■■■ 4.21
UBE3A-222	ENST00000630907	EPRS	P07814	1512 aa	Known RBP	41.31	■■■■■ 4.2
UBE3A-222	ENST00000630907	TRH	P20396	242 aa	Predicted RBP	41.27	■■■■■ 4.2
UBE3A-222	ENST00000630907	CDK13	Q14004	1512 aa	Known RBP	41.27	■■■■■ 4.2
UBE3A-222	ENST00000630907	WDR7	Q9Y4E6	1490 aa		41.22	■■■■■ 4.19
UBE3A-222	ENST00000630907	CCDC18	Q5T9S5	1454 aa		41.21	■■■■■ 4.19
UBE3A-222	ENST00000630907	PLEKHD1	A6NEE1	506 aa		41.2	■■■■■ 4.19
UBE3A-222	ENST00000630907	ABCC10	Q5T3U5	1492 aa		41.2	■■■■■ 4.19
UBE3A-222	ENST00000630907	LRRIQ1	Q96JM4	1722 aa		41.17	■■■■■ 4.18
UBE3A-222	ENST00000630907	CDK11A	Q9UQ88	783 aa	Predicted RBP	41.15	■■■■■ 4.18
UBE3A-222	ENST00000630907	FAM69C	Q0P6D2	419 aa		41.14	■■■■■ 4.18
UBE3A-222	ENST00000630907	KCNH8	Q96L42	1107 aa		41.13	■■■■■ 4.17
UBE3A-222	ENST00000630907	DIP2B	Q9P265	1576 aa		41.12	■■■■■ 4.17
UBE3A-222	ENST00000630907	KIF13A	Q9H1H9	1805 aa		41.02	■■■■■ 4.16
UBE3A-222	ENST00000630907	GLI2	P10070	1586 aa		41.02	■■■■■ 4.16
UBE3A-222	ENST00000630907	TRO	Q12816	1431 aa	Predicted RBP	40.97	■■■■■ 4.15
UBE3A-222	ENST00000630907	APLP2	Q06481	763 aa		40.91	■■■■■ 4.14
UBE3A-222	ENST00000630907	MAGI3	Q5TCQ9	1506 aa		40.91	■■■■■ 4.14
UBE3A-222	ENST00000630907	TIAM1	Q13009	1591 aa		40.89	■■■■■ 4.14
UBE3A-222	ENST00000630907	CFAP43	Q8NDM7	1665 aa		40.88	■■■■■ 4.13
UBE3A-222	ENST00000630907	MTUS2	Q5JR59	1369 aa		40.87	■■■■■ 4.13
UBE3A-222	ENST00000630907	MAP3K1	Q13233	1512 aa		40.87	■■■■■ 4.13
UBE3A-222	ENST00000630907	ABCA9	Q8IUA7	1624 aa		40.82	■■■■■ 4.13
UBE3A-222	ENST00000630907	CD109	Q6YHK3	1445 aa		40.82	■■■■■ 4.12
UBE3A-222	ENST00000630907	MAP3K4	Q9Y6R4	1608 aa		40.82	■■■■■ 4.12
UBE3A-222	ENST00000630907	KIF14	Q15058	1648 aa		40.79	■■■■■ 4.12
UBE3A-222	ENST00000630907	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	40.79	■■■■■ 4.12	3e-8	■□□□□ 10.1
UBE3A-222	ENST00000630907	EHBP1L1	Q8N3D4	1523 aa		40.77	■■■■■ 4.12
UBE3A-222	ENST00000630907	LRRC9	Q6ZRR7	1453 aa		40.74	■■■■■ 4.11
UBE3A-222	ENST00000630907	TSPOAP1	O95153	1857 aa		40.73	■■■■■ 4.11
UBE3A-222	ENST00000630907	KANK4	Q5T7N3	995 aa	Predicted RBP	40.72	■■■■■ 4.11
UBE3A-222	ENST00000630907	TTC37	Q6PGP7	1564 aa		40.71	■■■■■ 4.11
UBE3A-222	ENST00000630907	PPRC1	Q5VV67	1664 aa	Known RBP	40.65	■■■■■ 4.1
UBE3A-222	ENST00000630907	TEX14	Q8IWB6	1497 aa		40.64	■■■■■ 4.1
UBE3A-222	ENST00000630907	PLCH2	O75038	1416 aa		40.59	■■■■■ 4.09
UBE3A-222	ENST00000630907	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.56	■■■■■ 4.08
UBE3A-222	ENST00000630907	NCOA2	Q15596	1464 aa		40.55	■■■■■ 4.08
UBE3A-222	ENST00000630907	CCNB3	Q8WWL7	1395 aa		40.54	■■■■■ 4.08
UBE3A-222	ENST00000630907	MYO5C	Q9NQX4	1742 aa		40.53	■■■■■ 4.08
UBE3A-222	ENST00000630907	ARAP3	Q8WWN8	1544 aa		40.49	■■■■■ 4.07
UBE3A-222	ENST00000630907	GPATCH8	Q9UKJ3	1502 aa	Known RBP	40.49	■■■■■ 4.07
UBE3A-222	ENST00000630907	EFCAB2	Q5VUJ9	269 aa		40.48	■■■■■ 4.07
UBE3A-222	ENST00000630907	FANCA	O15360	1455 aa		40.47	■■■■■ 4.07
UBE3A-222	ENST00000630907	NEO1	Q92859	1461 aa		40.47	■■■■■ 4.07
UBE3A-222	ENST00000630907	ARHGAP5	Q13017	1502 aa		40.45	■■■■■ 4.07
UBE3A-222	ENST00000630907	PHLDB1	Q86UU1	1377 aa		40.45	■■■■■ 4.07

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms