RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 HIRIP3Q9BW71 556 aaPredicted RBP26.83■■□□□ 1.89
MECP2-218ENST00000629277 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
MECP2-218ENST00000629277 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
MECP2-218ENST00000629277 TIAM1Q13009 1591 aa26.8■■□□□ 1.88
MECP2-218ENST00000629277 WDR97A6NE52 1622 aa26.79■■□□□ 1.88
MECP2-218ENST00000629277 ATP1B4Q9UN42 357 aaPredicted RBP26.78■■□□□ 1.88
MECP2-218ENST00000629277 LRRC9Q6ZRR7 1453 aa26.76■■□□□ 1.87
MECP2-218ENST00000629277 CARMIL1Q5VZK9 1371 aa26.74■■□□□ 1.87
MECP2-218ENST00000629277 FKBP8Q14318 412 aa26.73■■□□□ 1.87
MECP2-218ENST00000629277 PPP1R15AO75807 674 aaPredicted RBP26.68■■□□□ 1.86
MECP2-218ENST00000629277 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
MECP2-218ENST00000629277 TRIM52Q96A61 297 aa26.63■■□□□ 1.85
MECP2-218ENST00000629277 FGD5Q6ZNL6 1462 aa26.61■■□□□ 1.85
MECP2-218ENST00000629277 PCF11O94913 1555 aaKnown RBP26.57■■□□□ 1.84
MECP2-218ENST00000629277 ANP32EQ9BTT0 268 aa26.56■■□□□ 1.84
MECP2-218ENST00000629277 FHOD3Q2V2M9 1422 aa26.56■■□□□ 1.84
MECP2-218ENST00000629277 FHAD1B1AJZ9 1412 aa26.55■■□□□ 1.84
MECP2-218ENST00000629277 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
MECP2-218ENST00000629277 ANP32CO43423 234 aa26.5■■□□□ 1.83
MECP2-218ENST00000629277 TIMELESSQ9UNS1 1208 aa26.47■■□□□ 1.83
MECP2-218ENST00000629277 CFAP43Q8NDM7 1665 aa26.46■■□□□ 1.83
MECP2-218ENST00000629277 CCER2I3L3R5 266 aa26.43■■□□□ 1.82
MECP2-218ENST00000629277 NEFLP07196 543 aa26.43■■□□□ 1.82
MECP2-218ENST00000629277 PRDM2Q13029 1718 aa26.4■■□□□ 1.82
MECP2-218ENST00000629277 RAD54L2Q9Y4B4 1467 aa26.4■■□□□ 1.82
MECP2-218ENST00000629277 TONSLQ96HA7 1378 aa26.39■■□□□ 1.82
MECP2-218ENST00000629277 RBM19Q9Y4C8 960 aaKnown RBP26.37■■□□□ 1.81
MECP2-218ENST00000629277 PTPRKQ15262 1439 aa26.36■■□□□ 1.81
MECP2-218ENST00000629277 FYCO1Q9BQS8 1478 aa26.35■■□□□ 1.81
MECP2-218ENST00000629277 CASKIN1Q8WXD9 1431 aa26.35■■□□□ 1.81
MECP2-218ENST00000629277 FGD6Q6ZV73 1430 aa26.33■■□□□ 1.81
MECP2-218ENST00000629277 CCDC18Q5T9S5 1454 aa26.31■■□□□ 1.8
MECP2-218ENST00000629277 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.29■■□□□ 1.8
MECP2-218ENST00000629277 FANCD2Q9BXW9 1451 aa26.28■■□□□ 1.8
MECP2-218ENST00000629277 MTUS2Q5JR59 1369 aa26.25■■□□□ 1.79
MECP2-218ENST00000629277 IRX6P78412 446 aaPredicted RBP26.25■■□□□ 1.79
MECP2-218ENST00000629277 AQRO60306 1485 aaKnown RBP eCLIP26.23■■□□□ 1.79
MECP2-218ENST00000629277 UACAQ9BZF9 1416 aa26.23■■□□□ 1.79
MECP2-218ENST00000629277 HFM1A2PYH4 1435 aa26.22■■□□□ 1.79
MECP2-218ENST00000629277 EFCAB5A4FU69 1503 aa26.22■■□□□ 1.79
MECP2-218ENST00000629277 HNRNPUQ00839 825 aaKnown RBP eCLIP26.21■■□□□ 1.79
MECP2-218ENST00000629277 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
MECP2-218ENST00000629277 SNAPC4Q5SXM2 1469 aa26.19■■□□□ 1.78
MECP2-218ENST00000629277 ABCA10Q8WWZ4 1543 aa26.19■■□□□ 1.78
MECP2-218ENST00000629277 NAIPQ13075 1403 aa26.18■■□□□ 1.78
MECP2-218ENST00000629277 FMN1Q68DA7 1419 aa26.17■■□□□ 1.78
MECP2-218ENST00000629277 PTPN23Q9H3S7 1636 aa26.17■■□□□ 1.78
MECP2-218ENST00000629277 RRP7BPQ9NSQ0 103 aa26.14■■□□□ 1.78
MECP2-218ENST00000629277 CHIC2Q9UKJ5 165 aa26.14■■□□□ 1.78
MECP2-218ENST00000629277 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
MECP2-218ENST00000629277 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
MECP2-218ENST00000629277 NCOA2Q15596 1464 aa26.12■■□□□ 1.77
MECP2-218ENST00000629277 WASHC2AQ641Q2 1341 aa26.12■■□□□ 1.77
MECP2-218ENST00000629277 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
MECP2-218ENST00000629277 NESP48681 1621 aa26.11■■□□□ 1.77
MECP2-218ENST00000629277 MSH5O43196 834 aa26.11■■□□□ 1.77
MECP2-218ENST00000629277 HSPA5P11021 654 aaKnown RBP26.1■■□□□ 1.77
MECP2-218ENST00000629277 MYOM3Q5VTT5 1437 aa26.09■■□□□ 1.77
MECP2-218ENST00000629277 CCDC184Q52MB2 194 aa26.07■■□□□ 1.76
MECP2-218ENST00000629277 CTTNBP2Q8WZ74 1663 aa26.07■■□□□ 1.76
MECP2-218ENST00000629277 TDRD9Q8NDG6 1382 aaKnown RBP26.07■■□□□ 1.76
MECP2-218ENST00000629277 LRRIQ1Q96JM4 1722 aa26.05■■□□□ 1.76
MECP2-218ENST00000629277 CC2D2AQ9P2K1 1620 aa26.05■■□□□ 1.76
MECP2-218ENST00000629277 CUL7Q14999 1698 aa26.03■■□□□ 1.76
MECP2-218ENST00000629277 FOXD1Q16676 465 aa26.01■■□□□ 1.75
MECP2-218ENST00000629277 BCL11AQ9H165 835 aa26.01■■□□□ 1.75
MECP2-218ENST00000629277 DENND4BO75064 1496 aaPredicted RBP26■■□□□ 1.75
MECP2-218ENST00000629277 GRIN2BQ13224 1484 aa26■■□□□ 1.75
MECP2-218ENST00000629277 C11orf95C9JLR9 678 aaPredicted RBP25.98■■□□□ 1.75
MECP2-218ENST00000629277 MAGI3Q5TCQ9 1506 aa25.96■■□□□ 1.75
MECP2-218ENST00000629277 ARID3CA6NKF2 412 aa25.96■■□□□ 1.75
MECP2-218ENST00000629277 SAMD9Q5K651 1589 aa25.95■■□□□ 1.74
MECP2-218ENST00000629277 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
MECP2-218ENST00000629277 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
MECP2-218ENST00000629277 L3MBTL2Q969R5 705 aa25.93■■□□□ 1.74
MECP2-218ENST00000629277 FAM9BQ8IZU0 186 aa25.92■■□□□ 1.74
MECP2-218ENST00000629277 KDM6BO15054 1643 aa25.92■■□□□ 1.74
MECP2-218ENST00000629277 SUPT6HQ7KZ85 1726 aaKnown RBP25.91■■□□□ 1.74
MECP2-218ENST00000629277 URB2Q14146 1524 aaKnown RBP25.9■■□□□ 1.74
MECP2-218ENST00000629277 UGGT2Q9NYU1 1516 aa25.9■■□□□ 1.74
MECP2-218ENST00000629277 MPHOSPH9Q99550 1183 aa25.9■■□□□ 1.74
MECP2-218ENST00000629277 EHBP1L1Q8N3D4 1523 aa25.89■■□□□ 1.74
MECP2-218ENST00000629277 CNTLNQ9NXG0 1405 aa25.86■■□□□ 1.73
MECP2-218ENST00000629277 GAPVD1Q14C86 1478 aa25.86■■□□□ 1.73
MECP2-218ENST00000629277 PRKRIP1Q9H875 184 aaPredicted RBP25.85■■□□□ 1.73
MECP2-218ENST00000629277 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
MECP2-218ENST00000629277 FANCIQ9NVI1 1328 aa25.83■■□□□ 1.73
MECP2-218ENST00000629277 MRS2Q9HD23 443 aa25.83■■□□□ 1.72
MECP2-218ENST00000629277 NBPF8Q3BBV2 869 aa25.82■■□□□ 1.72
MECP2-218ENST00000629277 B4GALNT3Q6L9W6 998 aa25.82■■□□□ 1.72
MECP2-218ENST00000629277 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
MECP2-218ENST00000629277 PPP4R2Q9NY27 417 aa25.79■■□□□ 1.72
MECP2-218ENST00000629277 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
MECP2-218ENST00000629277 CNGB1Q14028 1251 aaPredicted RBP25.79■■□□□ 1.72
MECP2-218ENST00000629277 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
MECP2-218ENST00000629277 TCOF1Q13428 1488 aaKnown RBP25.78■■□□□ 1.72
MECP2-218ENST00000629277 HECW1Q76N89 1606 aa25.77■■□□□ 1.72
MECP2-218ENST00000629277 NCOA1Q15788 1441 aa25.77■■□□□ 1.72
MECP2-218ENST00000629277 CDK13Q14004 1512 aaKnown RBP25.75■■□□□ 1.71
MECP2-218ENST00000629277 GCC2Q8IWJ2 1684 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms