RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 CEP170Q5SW79 1584 aa18.72■□□□□ 0.59
PTPN7-219ENST00000629151 CLASP1Q7Z460 1538 aa18.69■□□□□ 0.58
PTPN7-219ENST00000629151 TNIKQ9UKE5 1360 aa18.67■□□□□ 0.58
PTPN7-219ENST00000629151 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
PTPN7-219ENST00000629151 DNAJC5Q9H3Z4 198 aa18.65■□□□□ 0.58
PTPN7-219ENST00000629151 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
PTPN7-219ENST00000629151 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
PTPN7-219ENST00000629151 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
PTPN7-219ENST00000629151 UGGT2Q9NYU1 1516 aa18.59■□□□□ 0.57
PTPN7-219ENST00000629151 PRG4Q92954 1404 aaPredicted RBP18.58■□□□□ 0.57
PTPN7-219ENST00000629151 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
PTPN7-219ENST00000629151 CTTNBP2Q8WZ74 1663 aa18.56■□□□□ 0.56
PTPN7-219ENST00000629151 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
PTPN7-219ENST00000629151 RANGAP1P46060 587 aaPredicted RBP18.49■□□□□ 0.55
PTPN7-219ENST00000629151 EFCAB5A4FU69 1503 aa18.49■□□□□ 0.55
PTPN7-219ENST00000629151 DISP1Q96F81 1524 aa18.49■□□□□ 0.55
PTPN7-219ENST00000629151 PTPRGP23470 1445 aa18.47■□□□□ 0.55
PTPN7-219ENST00000629151 CLIP1P30622 1438 aa18.47■□□□□ 0.55
PTPN7-219ENST00000629151 CEP162Q5TB80 1403 aa18.43■□□□□ 0.54
PTPN7-219ENST00000629151 P3H3Q8IVL6 736 aa18.43■□□□□ 0.54
PTPN7-219ENST00000629151 KIAA0556O60303 1618 aa18.42■□□□□ 0.54
PTPN7-219ENST00000629151 SAMD9Q5K651 1589 aa18.42■□□□□ 0.54
PTPN7-219ENST00000629151 ARHGAP35Q9NRY4 1499 aa18.4■□□□□ 0.54
PTPN7-219ENST00000629151 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
PTPN7-219ENST00000629151 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
PTPN7-219ENST00000629151 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
PTPN7-219ENST00000629151 CYB5RLQ6IPT4 315 aa18.39■□□□□ 0.53
PTPN7-219ENST00000629151 ERCC6L2Q5T890 1561 aa18.38■□□□□ 0.53
PTPN7-219ENST00000629151 FMN1Q68DA7 1419 aa18.38■□□□□ 0.53
PTPN7-219ENST00000629151 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
PTPN7-219ENST00000629151 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
PTPN7-219ENST00000629151 TTBK1Q5TCY1 1321 aaPredicted RBP18.34■□□□□ 0.53
PTPN7-219ENST00000629151 UACAQ9BZF9 1416 aa18.33■□□□□ 0.53
PTPN7-219ENST00000629151 NPM1P06748 294 aaKnown RBP eCLIP18.3■□□□□ 0.52
PTPN7-219ENST00000629151 UHRF1BP1LA0JNW5 1464 aa18.3■□□□□ 0.52
PTPN7-219ENST00000629151 PLB1Q6P1J6 1458 aa18.25■□□□□ 0.51
PTPN7-219ENST00000629151 CASKIN1Q8WXD9 1431 aa18.23■□□□□ 0.51
PTPN7-219ENST00000629151 ABCA8O94911 1581 aa18.23■□□□□ 0.51
PTPN7-219ENST00000629151 ABCC2Q92887 1545 aa18.23■□□□□ 0.51
PTPN7-219ENST00000629151 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
PTPN7-219ENST00000629151 ATP1B4Q9UN42 357 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-219ENST00000629151 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
PTPN7-219ENST00000629151 FYCO1Q9BQS8 1478 aa18.18■□□□□ 0.5
PTPN7-219ENST00000629151 KDM5BQ9UGL1 1544 aa18.18■□□□□ 0.5
PTPN7-219ENST00000629151 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
PTPN7-219ENST00000629151 NUP153P49790 1475 aaKnown RBP18.15■□□□□ 0.5
PTPN7-219ENST00000629151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
PTPN7-219ENST00000629151 APLP2Q06481 763 aa18.15■□□□□ 0.5
PTPN7-219ENST00000629151 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
PTPN7-219ENST00000629151 ADCY10Q96PN6 1610 aa18.14■□□□□ 0.49
PTPN7-219ENST00000629151 ATP10BO94823 1461 aa18.14■□□□□ 0.49
PTPN7-219ENST00000629151 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
PTPN7-219ENST00000629151 PLEKHD1A6NEE1 506 aa18.13■□□□□ 0.49
PTPN7-219ENST00000629151 CCDC18Q5T9S5 1454 aa18.13■□□□□ 0.49
PTPN7-219ENST00000629151 EPRSP07814 1512 aaKnown RBP18.1■□□□□ 0.49
PTPN7-219ENST00000629151 ARID3CA6NKF2 412 aa18.08■□□□□ 0.48
PTPN7-219ENST00000629151 PCF11O94913 1555 aaKnown RBP18.08■□□□□ 0.48
PTPN7-219ENST00000629151 MAPKBP1O60336 1514 aa18.06■□□□□ 0.48
PTPN7-219ENST00000629151 MAP3K1Q13233 1512 aa18.06■□□□□ 0.48
PTPN7-219ENST00000629151 ASXL2Q76L83 1435 aa18.05■□□□□ 0.48
PTPN7-219ENST00000629151 ZCCHC11Q5TAX3 1644 aaKnown RBP18.01■□□□□ 0.47
PTPN7-219ENST00000629151 WDR7Q9Y4E6 1490 aa18.01■□□□□ 0.47
PTPN7-219ENST00000629151 CDK13Q14004 1512 aaKnown RBP18■□□□□ 0.47
PTPN7-219ENST00000629151 TROQ12816 1431 aaPredicted RBP17.99■□□□□ 0.47
PTPN7-219ENST00000629151 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
PTPN7-219ENST00000629151 KCNH8Q96L42 1107 aa17.98■□□□□ 0.47
PTPN7-219ENST00000629151 ABCC10Q5T3U5 1492 aa17.95■□□□□ 0.46
PTPN7-219ENST00000629151 TIAM1Q13009 1591 aa17.95■□□□□ 0.46
PTPN7-219ENST00000629151 FAM69CQ0P6D2 419 aa17.94■□□□□ 0.46
PTPN7-219ENST00000629151 LRRC9Q6ZRR7 1453 aa17.92■□□□□ 0.46
PTPN7-219ENST00000629151 TRHP20396 242 aaPredicted RBP17.91■□□□□ 0.46
PTPN7-219ENST00000629151 EHBP1L1Q8N3D4 1523 aa17.9■□□□□ 0.46
PTPN7-219ENST00000629151 KANK4Q5T7N3 995 aaPredicted RBP17.9■□□□□ 0.46
PTPN7-219ENST00000629151 GLI2P10070 1586 aa17.89■□□□□ 0.45
PTPN7-219ENST00000629151 CFAP43Q8NDM7 1665 aa17.87■□□□□ 0.45
PTPN7-219ENST00000629151 LRRIQ1Q96JM4 1722 aa17.86■□□□□ 0.45
PTPN7-219ENST00000629151 MAGI3Q5TCQ9 1506 aa17.85■□□□□ 0.45
PTPN7-219ENST00000629151 KIF14Q15058 1648 aa17.84■□□□□ 0.45
PTPN7-219ENST00000629151 CD109Q6YHK3 1445 aa17.84■□□□□ 0.45
PTPN7-219ENST00000629151 DIP2BQ9P265 1576 aa17.83■□□□□ 0.45
PTPN7-219ENST00000629151 CCNB3Q8WWL7 1395 aa17.83■□□□□ 0.45
PTPN7-219ENST00000629151 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
PTPN7-219ENST00000629151 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
PTPN7-219ENST00000629151 PLCH2O75038 1416 aa17.81■□□□□ 0.44
PTPN7-219ENST00000629151 PHLDB1Q86UU1 1377 aa17.8■□□□□ 0.44
PTPN7-219ENST00000629151 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.8■□□□□ 0.44
PTPN7-219ENST00000629151 ABCA9Q8IUA7 1624 aa17.8■□□□□ 0.44
PTPN7-219ENST00000629151 CFDP1Q9UEE9 299 aaPredicted RBP17.78■□□□□ 0.44
PTPN7-219ENST00000629151 SUPT6HQ7KZ85 1726 aaKnown RBP17.78■□□□□ 0.44
PTPN7-219ENST00000629151 TEX14Q8IWB6 1497 aa17.77■□□□□ 0.44
PTPN7-219ENST00000629151 ARAP3Q8WWN8 1544 aa17.77■□□□□ 0.43
PTPN7-219ENST00000629151 GPATCH8Q9UKJ3 1502 aaKnown RBP17.76■□□□□ 0.43
PTPN7-219ENST00000629151 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
PTPN7-219ENST00000629151 MAP3K4Q9Y6R4 1608 aa17.73■□□□□ 0.43
PTPN7-219ENST00000629151 MYOM3Q5VTT5 1437 aa17.72■□□□□ 0.43
PTPN7-219ENST00000629151 NEO1Q92859 1461 aa17.72■□□□□ 0.43
PTPN7-219ENST00000629151 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
PTPN7-219ENST00000629151 TTC37Q6PGP7 1564 aa17.71■□□□□ 0.43
PTPN7-219ENST00000629151 FANCAO15360 1455 aa17.7■□□□□ 0.42
PTPN7-219ENST00000629151 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms