RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 NISCHQ9Y2I1 1504 aa27.16■■□□□ 1.94
PTPN7-219ENST00000629151 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
PTPN7-219ENST00000629151 ABCC9O60706 1549 aa23.08■■□□□ 1.29
PTPN7-219ENST00000629151 ZCCHC6Q5VYS8 1495 aaKnown RBP22.68■■□□□ 1.22
PTPN7-219ENST00000629151 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
PTPN7-219ENST00000629151 DCAF1Q9Y4B6 1507 aa22.56■■□□□ 1.2
PTPN7-219ENST00000629151 MYO15BQ96JP2 1530 aa22.55■■□□□ 1.2
PTPN7-219ENST00000629151 NACADO15069 1562 aa22.51■■□□□ 1.19
PTPN7-219ENST00000629151 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
PTPN7-219ENST00000629151 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
PTPN7-219ENST00000629151 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPN7-219ENST00000629151 UNC13AQ9UPW8 1703 aa21.65■■□□□ 1.06
PTPN7-219ENST00000629151 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
PTPN7-219ENST00000629151 BICRAQ9NZM4 1560 aa21.62■■□□□ 1.05
PTPN7-219ENST00000629151 EIF4G1Q04637 1599 aaKnown RBP21.07■□□□□ 0.96
PTPN7-219ENST00000629151 CECR2Q9BXF3 1484 aa21.07■□□□□ 0.96
PTPN7-219ENST00000629151 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
PTPN7-219ENST00000629151 SMARCA4P51532 1647 aa20.93■□□□□ 0.94
PTPN7-219ENST00000629151 MROH2BQ7Z745 1585 aa20.89■□□□□ 0.93
PTPN7-219ENST00000629151 DNAJC5BQ9UF47 199 aa20.88■□□□□ 0.93
PTPN7-219ENST00000629151 CC2D2AQ9P2K1 1620 aa20.86■□□□□ 0.93
PTPN7-219ENST00000629151 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
PTPN7-219ENST00000629151 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
PTPN7-219ENST00000629151 NCAPD3P42695 1498 aa20.81■□□□□ 0.92
PTPN7-219ENST00000629151 ATAD2BQ9ULI0 1458 aa20.81■□□□□ 0.92
PTPN7-219ENST00000629151 PEG3Q9GZU2 1588 aa20.78■□□□□ 0.92
PTPN7-219ENST00000629151 BAZ1BQ9UIG0 1483 aaKnown RBP20.66■□□□□ 0.9
PTPN7-219ENST00000629151 HMGXB3Q12766 1538 aa20.66■□□□□ 0.9
PTPN7-219ENST00000629151 WIZO95785 1651 aa20.61■□□□□ 0.89
PTPN7-219ENST00000629151 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
PTPN7-219ENST00000629151 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
PTPN7-219ENST00000629151 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
PTPN7-219ENST00000629151 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
PTPN7-219ENST00000629151 CFTRP13569 1480 aa20.14■□□□□ 0.81
PTPN7-219ENST00000629151 LAMC3Q9Y6N6 1575 aa20.13■□□□□ 0.81
PTPN7-219ENST00000629151 PDS5BQ9NTI5 1447 aa20.08■□□□□ 0.8
PTPN7-219ENST00000629151 NESP48681 1621 aa20.04■□□□□ 0.8
PTPN7-219ENST00000629151 ERCC6Q03468 1493 aa19.93■□□□□ 0.78
PTPN7-219ENST00000629151 FANCD2Q9BXW9 1451 aa19.92■□□□□ 0.78
PTPN7-219ENST00000629151 CEP164Q9UPV0 1460 aa19.87■□□□□ 0.77
PTPN7-219ENST00000629151 PRDM2Q13029 1718 aa19.8■□□□□ 0.76
PTPN7-219ENST00000629151 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
PTPN7-219ENST00000629151 MRC2Q9UBG0 1479 aa19.77■□□□□ 0.76
PTPN7-219ENST00000629151 KIF21AQ7Z4S6 1674 aa19.71■□□□□ 0.75
PTPN7-219ENST00000629151 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
PTPN7-219ENST00000629151 WDR62O43379 1518 aa19.66■□□□□ 0.74
PTPN7-219ENST00000629151 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
PTPN7-219ENST00000629151 THOC2Q8NI27 1593 aaKnown RBP19.63■□□□□ 0.73
PTPN7-219ENST00000629151 DNMBPQ6XZF7 1577 aa19.62■□□□□ 0.73
PTPN7-219ENST00000629151 TOPBP1Q92547 1522 aa19.62■□□□□ 0.73
PTPN7-219ENST00000629151 CUX2O14529 1486 aa19.62■□□□□ 0.73
PTPN7-219ENST00000629151 CUX1P39880 1505 aa19.57■□□□□ 0.72
PTPN7-219ENST00000629151 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
PTPN7-219ENST00000629151 TOP2BQ02880 1626 aa19.51■□□□□ 0.71
PTPN7-219ENST00000629151 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
PTPN7-219ENST00000629151 SOGA1O94964 1423 aa19.48■□□□□ 0.71
PTPN7-219ENST00000629151 POLA1P09884 1462 aaPredicted RBP19.48■□□□□ 0.71
PTPN7-219ENST00000629151 FGD5Q6ZNL6 1462 aa19.48■□□□□ 0.71
PTPN7-219ENST00000629151 BIVM-ERCC5R4GMW8 1640 aa19.47■□□□□ 0.71
PTPN7-219ENST00000629151 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
PTPN7-219ENST00000629151 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
PTPN7-219ENST00000629151 RAD54L2Q9Y4B4 1467 aa19.36■□□□□ 0.69
PTPN7-219ENST00000629151 ABCA10Q8WWZ4 1543 aa19.35■□□□□ 0.69
PTPN7-219ENST00000629151 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
PTPN7-219ENST00000629151 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
PTPN7-219ENST00000629151 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
PTPN7-219ENST00000629151 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
PTPN7-219ENST00000629151 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
PTPN7-219ENST00000629151 AQRO60306 1485 aaKnown RBP eCLIP19.23■□□□□ 0.676e-7■■■■□ 24
PTPN7-219ENST00000629151 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
PTPN7-219ENST00000629151 GRIN2BQ13224 1484 aa19.2■□□□□ 0.66
PTPN7-219ENST00000629151 EEA1Q15075 1411 aa19.18■□□□□ 0.66
PTPN7-219ENST00000629151 EIF4G3O43432 1585 aaKnown RBP19.15■□□□□ 0.66
PTPN7-219ENST00000629151 ABCA5Q8WWZ7 1642 aa19.14■□□□□ 0.66
PTPN7-219ENST00000629151 IGF1RP08069 1367 aa19.13■□□□□ 0.65
PTPN7-219ENST00000629151 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
PTPN7-219ENST00000629151 MAGI1Q96QZ7 1491 aaPredicted RBP19.11■□□□□ 0.65
PTPN7-219ENST00000629151 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
PTPN7-219ENST00000629151 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
PTPN7-219ENST00000629151 FHAD1B1AJZ9 1412 aa19.06■□□□□ 0.64
PTPN7-219ENST00000629151 SNAPC4Q5SXM2 1469 aa19.05■□□□□ 0.64
PTPN7-219ENST00000629151 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
PTPN7-219ENST00000629151 CARMIL1Q5VZK9 1371 aa19.04■□□□□ 0.64
PTPN7-219ENST00000629151 SYNJ2O15056 1496 aa19.02■□□□□ 0.63
PTPN7-219ENST00000629151 FBLN2P98095 1184 aa19■□□□□ 0.63
PTPN7-219ENST00000629151 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
PTPN7-219ENST00000629151 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
PTPN7-219ENST00000629151 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
PTPN7-219ENST00000629151 CUL7Q14999 1698 aa18.97■□□□□ 0.63
PTPN7-219ENST00000629151 PRXQ9BXM0 1461 aa18.95■□□□□ 0.62
PTPN7-219ENST00000629151 ADAMTS12P58397 1594 aa18.94■□□□□ 0.62
PTPN7-219ENST00000629151 RAPGEF2Q9Y4G8 1499 aa18.94■□□□□ 0.62
PTPN7-219ENST00000629151 GRIN2AQ12879 1464 aa18.91■□□□□ 0.62
PTPN7-219ENST00000629151 NUP160Q12769 1436 aa18.84■□□□□ 0.61
PTPN7-219ENST00000629151 KIF21BO75037 1637 aa18.81■□□□□ 0.6
PTPN7-219ENST00000629151 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
PTPN7-219ENST00000629151 KIAA0586Q9BVV6 1533 aa18.78■□□□□ 0.6
PTPN7-219ENST00000629151 UBTFP17480 764 aaKnown RBP18.77■□□□□ 0.6
PTPN7-219ENST00000629151 CHD1O14646 1710 aa18.77■□□□□ 0.59
PTPN7-219ENST00000629151 JPH4Q96JJ6 628 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms