RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 RAPGEF2Q9Y4G8 1499 aa44.07■■■■■ 4.65
UBE2A-207ENST00000628549 JPH4Q96JJ6 628 aa44.05■■■■■ 4.64
UBE2A-207ENST00000628549 ERCC6L2Q5T890 1561 aa44.04■■■■■ 4.64
UBE2A-207ENST00000628549 PRG4Q92954 1404 aaPredicted RBP44■■■■■ 4.63
UBE2A-207ENST00000628549 EEA1Q15075 1411 aa43.9■■■■■ 4.62
UBE2A-207ENST00000628549 CHIC1Q5VXU3 224 aa43.88■■■■■ 4.62
UBE2A-207ENST00000628549 IQGAP2Q13576 1575 aa43.88■■■■■ 4.61
UBE2A-207ENST00000628549 PRXQ9BXM0 1461 aa43.83■■■■■ 4.61
UBE2A-207ENST00000628549 CTTNBP2Q8WZ74 1663 aa43.78■■■■■ 4.6
UBE2A-207ENST00000628549 CSRNP3Q8WYN3 585 aa43.78■■■■■ 4.6
UBE2A-207ENST00000628549 CARMIL2Q6F5E8 1435 aa43.69■■■■■ 4.58
UBE2A-207ENST00000628549 FAM9AQ8IZU1 332 aaPredicted RBP43.6■■■■■ 4.57
UBE2A-207ENST00000628549 UGGT2Q9NYU1 1516 aa43.59■■■■■ 4.57
UBE2A-207ENST00000628549 TNIKQ9UKE5 1360 aa43.5■■■■■ 4.55
UBE2A-207ENST00000628549 DISP1Q96F81 1524 aa43.48■■■■■ 4.55
UBE2A-207ENST00000628549 PTPRGP23470 1445 aa43.48■■■■■ 4.55
UBE2A-207ENST00000628549 TRHP20396 242 aaPredicted RBP43.46■■■■■ 4.55
UBE2A-207ENST00000628549 KIAA0556O60303 1618 aa43.44■■■■■ 4.55
UBE2A-207ENST00000628549 KIF21BO75037 1637 aa43.44■■■■■ 4.55
UBE2A-207ENST00000628549 GOLGA3Q08378 1498 aa43.41■■■■■ 4.54
UBE2A-207ENST00000628549 TTBK1Q5TCY1 1321 aaPredicted RBP43.38■■■■■ 4.53
UBE2A-207ENST00000628549 ADCY10Q96PN6 1610 aa43.37■■■■■ 4.53
UBE2A-207ENST00000628549 NPM1P06748 294 aaKnown RBP eCLIP43.34■■■■■ 4.53
UBE2A-207ENST00000628549 UACAQ9BZF9 1416 aa43.18■■■■■ 4.5
UBE2A-207ENST00000628549 UHRF1BP1LA0JNW5 1464 aa43.16■■■■■ 4.5
UBE2A-207ENST00000628549 MAPKBP1O60336 1514 aa43.14■■■■■ 4.5
UBE2A-207ENST00000628549 ABCC2Q92887 1545 aa43.12■■■■■ 4.49
UBE2A-207ENST00000628549 SAMD9Q5K651 1589 aa43.1■■■■■ 4.49
UBE2A-207ENST00000628549 UBTFP17480 764 aaKnown RBP43.05■■■■■ 4.48
UBE2A-207ENST00000628549 EHMT2Q96KQ7 1210 aa43.02■■■■■ 4.48
UBE2A-207ENST00000628549 KIF13AQ9H1H9 1805 aa43.01■■■■■ 4.48
UBE2A-207ENST00000628549 P3H3Q8IVL6 736 aa42.99■■■■■ 4.47
UBE2A-207ENST00000628549 RANGAP1P46060 587 aaPredicted RBP42.98■■■■■ 4.47
UBE2A-207ENST00000628549 PLB1Q6P1J6 1458 aa42.95■■■■■ 4.47
UBE2A-207ENST00000628549 ABCA8O94911 1581 aa42.95■■■■■ 4.47
UBE2A-207ENST00000628549 EFCAB5A4FU69 1503 aa42.94■■■■■ 4.46
UBE2A-207ENST00000628549 KDM5BQ9UGL1 1544 aa42.93■■■■■ 4.46
UBE2A-207ENST00000628549 ABCC10Q5T3U5 1492 aa42.93■■■■■ 4.46
UBE2A-207ENST00000628549 ZCCHC11Q5TAX3 1644 aaKnown RBP42.91■■■■■ 4.46
UBE2A-207ENST00000628549 DIP2BQ9P265 1576 aa42.89■■■■■ 4.46
UBE2A-207ENST00000628549 ASXL2Q76L83 1435 aa42.83■■■■■ 4.45
UBE2A-207ENST00000628549 FAM69CQ0P6D2 419 aa42.83■■■■■ 4.45
UBE2A-207ENST00000628549 FHOD3Q2V2M9 1422 aa42.8■■■■■ 4.44
UBE2A-207ENST00000628549 RAPGEF6Q8TEU7 1601 aa42.76■■■■■ 4.44
UBE2A-207ENST00000628549 GLI2P10070 1586 aa42.64■■■■■ 4.42
UBE2A-207ENST00000628549 TSPOAP1O95153 1857 aa42.63■■■■■ 4.41
UBE2A-207ENST00000628549 WDR7Q9Y4E6 1490 aa42.62■■■■■ 4.41
UBE2A-207ENST00000628549 ARHGAP35Q9NRY4 1499 aa42.6■■■■■ 4.41
UBE2A-207ENST00000628549 EPRSP07814 1512 aaKnown RBP42.58■■■■■ 4.41
UBE2A-207ENST00000628549 ATP10BO94823 1461 aa42.55■■■■■ 4.4
UBE2A-207ENST00000628549 ARID3CA6NKF2 412 aa42.54■■■■■ 4.4
UBE2A-207ENST00000628549 FMN1Q68DA7 1419 aa42.53■■■■■ 4.4
UBE2A-207ENST00000628549 NUP153P49790 1475 aaKnown RBP42.5■■■■■ 4.39
UBE2A-207ENST00000628549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.47■■■■■ 4.39
UBE2A-207ENST00000628549 HNRNPUL2Q1KMD3 747 aaKnown RBP42.47■■■■■ 4.39
UBE2A-207ENST00000628549 MAP3K4Q9Y6R4 1608 aa42.45■■■■■ 4.39
UBE2A-207ENST00000628549 KCNH8Q96L42 1107 aa42.4■■■■■ 4.38
UBE2A-207ENST00000628549 HECW1Q76N89 1606 aa42.38■■■■■ 4.38
UBE2A-207ENST00000628549 CFAP43Q8NDM7 1665 aa42.38■■■■■ 4.38
UBE2A-207ENST00000628549 PPRC1Q5VV67 1664 aaKnown RBP42.36■■■■■ 4.37
UBE2A-207ENST00000628549 CLIP1P30622 1438 aa42.36■■■■■ 4.37
UBE2A-207ENST00000628549 TEX14Q8IWB6 1497 aa42.3■■■■■ 4.36
UBE2A-207ENST00000628549 KDM6BO15054 1643 aa42.29■■■■■ 4.36
UBE2A-207ENST00000628549 ATP1B4Q9UN42 357 aaPredicted RBP42.29■■■■■ 4.36
UBE2A-207ENST00000628549 PLEKHD1A6NEE1 506 aa42.25■■■■■ 4.35
UBE2A-207ENST00000628549 CD109Q6YHK3 1445 aa42.23■■■■■ 4.35
UBE2A-207ENST00000628549 CDK13Q14004 1512 aaKnown RBP42.21■■■■■ 4.35
UBE2A-207ENST00000628549 ABCA9Q8IUA7 1624 aa42.2■■■■■ 4.35
UBE2A-207ENST00000628549 MAGI3Q5TCQ9 1506 aa42.16■■■■■ 4.34
UBE2A-207ENST00000628549 PCF11O94913 1555 aaKnown RBP42.15■■■■■ 4.34
UBE2A-207ENST00000628549 CASKIN1Q8WXD9 1431 aa42.13■■■■■ 4.34
UBE2A-207ENST00000628549 CEP162Q5TB80 1403 aa42.12■■■■■ 4.33
UBE2A-207ENST00000628549 CDK11AQ9UQ88 783 aaPredicted RBP42.11■■■■■ 4.33
UBE2A-207ENST00000628549 LRRIQ1Q96JM4 1722 aa42.09■■■■■ 4.33
UBE2A-207ENST00000628549 FYCO1Q9BQS8 1478 aa42.07■■■■■ 4.33
UBE2A-207ENST00000628549 CCDC18Q5T9S5 1454 aa42.05■■■■■ 4.32
UBE2A-207ENST00000628549 LOC105371045A0A1W2PR82 267 aa42.05■■■■■ 4.32
UBE2A-207ENST00000628549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.95■■■■■ 4.312e-7■■■■□ 26.2
UBE2A-207ENST00000628549 TTC37Q6PGP7 1564 aa41.9■■■■■ 4.3
UBE2A-207ENST00000628549 TROQ12816 1431 aaPredicted RBP41.9■■■■■ 4.3
UBE2A-207ENST00000628549 KIF14Q15058 1648 aa41.9■■■■■ 4.3
UBE2A-207ENST00000628549 PHLDB1Q86UU1 1377 aa41.89■■■■■ 4.3
UBE2A-207ENST00000628549 NEO1Q92859 1461 aa41.86■■■■■ 4.29
UBE2A-207ENST00000628549 COL17A1Q9UMD9 1497 aaPredicted RBP41.86■■■■■ 4.29
UBE2A-207ENST00000628549 CFAP74Q9C0B2 1584 aa41.84■■■■■ 4.29
UBE2A-207ENST00000628549 MYO5CQ9NQX4 1742 aa41.81■■■■■ 4.28
UBE2A-207ENST00000628549 ARAP3Q8WWN8 1544 aa41.8■■■■■ 4.28
UBE2A-207ENST00000628549 FANCAO15360 1455 aa41.73■■■■■ 4.27
UBE2A-207ENST00000628549 PLCH2O75038 1416 aa41.69■■■■■ 4.27
UBE2A-207ENST00000628549 AKNAQ7Z591 1439 aa41.65■■■■■ 4.26
UBE2A-207ENST00000628549 VPS8Q8N3P4 1428 aa41.64■■■■■ 4.26
UBE2A-207ENST00000628549 MTUS2Q5JR59 1369 aa41.58■■■■■ 4.25
UBE2A-207ENST00000628549 EFCAB2Q5VUJ9 269 aa41.57■■■■■ 4.25
UBE2A-207ENST00000628549 ARHGAP5Q13017 1502 aa41.56■■■■■ 4.24
UBE2A-207ENST00000628549 DENND4BO75064 1496 aaPredicted RBP41.56■■■■■ 4.24
UBE2A-207ENST00000628549 PREX2Q70Z35 1606 aa41.54■■■■■ 4.24
UBE2A-207ENST00000628549 CDC42BPBQ9Y5S2 1711 aa41.52■■■■■ 4.24
UBE2A-207ENST00000628549 RAPGEF3O95398 923 aa41.52■■■■■ 4.24
UBE2A-207ENST00000628549 ADGRL1O94910 1474 aa41.52■■■■■ 4.24
UBE2A-207ENST00000628549 RICTORQ6R327 1708 aa41.52■■■■■ 4.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms