RNA–Protein interactions for RNA: ENST00000626119.2

COPS7A-222, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-222ENST00000626119 TIAM1Q13009 1591 aa30.09■■■□□ 2.41
COPS7A-222ENST00000626119 TARBP1Q13395 1621 aaKnown RBP30.03■■■□□ 2.4
COPS7A-222ENST00000626119 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.4
COPS7A-222ENST00000626119 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
COPS7A-222ENST00000626119 MRC2Q9UBG0 1479 aa29.98■■■□□ 2.39
COPS7A-222ENST00000626119 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
COPS7A-222ENST00000626119 LRRC9Q6ZRR7 1453 aa29.96■■■□□ 2.39
COPS7A-222ENST00000626119 FYCO1Q9BQS8 1478 aa29.96■■■□□ 2.39
COPS7A-222ENST00000626119 CLSPNQ9HAW4 1339 aa29.96■■■□□ 2.39
COPS7A-222ENST00000626119 CFAP43Q8NDM7 1665 aa29.95■■■□□ 2.39
COPS7A-222ENST00000626119 CASKIN1Q8WXD9 1431 aa29.92■■■□□ 2.38
COPS7A-222ENST00000626119 FMN1Q68DA7 1419 aa29.92■■■□□ 2.38
COPS7A-222ENST00000626119 PCF11O94913 1555 aaKnown RBP29.91■■■□□ 2.38
COPS7A-222ENST00000626119 FHOD3Q2V2M9 1422 aa29.88■■■□□ 2.37
COPS7A-222ENST00000626119 SAMD9Q5K651 1589 aa29.86■■■□□ 2.37
COPS7A-222ENST00000626119 PBRM1Q86U86 1689 aa29.81■■■□□ 2.36
COPS7A-222ENST00000626119 P3H3Q8IVL6 736 aa29.8■■■□□ 2.36
COPS7A-222ENST00000626119 WDR62O43379 1518 aa29.79■■■□□ 2.36
COPS7A-222ENST00000626119 IFT140Q96RY7 1462 aa29.79■■■□□ 2.36
COPS7A-222ENST00000626119 GRIN2BQ13224 1484 aa29.75■■■□□ 2.35
COPS7A-222ENST00000626119 SNAPC4Q5SXM2 1469 aa29.74■■■□□ 2.35
COPS7A-222ENST00000626119 DHX57Q6P158 1386 aaKnown RBP29.73■■■□□ 2.35
COPS7A-222ENST00000626119 THOC2Q8NI27 1593 aaKnown RBP29.73■■■□□ 2.35
COPS7A-222ENST00000626119 ADAMTS12P58397 1594 aa29.72■■■□□ 2.35
COPS7A-222ENST00000626119 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.7■■■□□ 2.35
COPS7A-222ENST00000626119 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
COPS7A-222ENST00000626119 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
COPS7A-222ENST00000626119 ATP1B4Q9UN42 357 aaPredicted RBP29.64■■■□□ 2.34
COPS7A-222ENST00000626119 DIEXFQ68CQ4 756 aaKnown RBP29.62■■■□□ 2.33
COPS7A-222ENST00000626119 IQGAP2Q13576 1575 aa29.61■■■□□ 2.33
COPS7A-222ENST00000626119 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
COPS7A-222ENST00000626119 CCDC18Q5T9S5 1454 aa29.54■■■□□ 2.32
COPS7A-222ENST00000626119 MTUS2Q5JR59 1369 aa29.53■■■□□ 2.32
COPS7A-222ENST00000626119 ERCC6Q03468 1493 aa29.52■■■□□ 2.32
COPS7A-222ENST00000626119 RAB3GAP2Q9H2M9 1393 aa29.51■■■□□ 2.31
COPS7A-222ENST00000626119 UGGT2Q9NYU1 1516 aa29.51■■■□□ 2.31
COPS7A-222ENST00000626119 ZNF608Q9ULD9 1512 aaPredicted RBP29.51■■■□□ 2.31
COPS7A-222ENST00000626119 ITGAEP38570 1179 aa29.49■■■□□ 2.31
COPS7A-222ENST00000626119 EHBP1L1Q8N3D4 1523 aa29.49■■■□□ 2.31
COPS7A-222ENST00000626119 FAM50AQ14320 339 aaKnown RBP29.47■■■□□ 2.31
COPS7A-222ENST00000626119 FGD6Q6ZV73 1430 aa29.46■■■□□ 2.31
COPS7A-222ENST00000626119 HECW1Q76N89 1606 aa29.46■■■□□ 2.31
COPS7A-222ENST00000626119 LRRIQ1Q96JM4 1722 aa29.46■■■□□ 2.31
COPS7A-222ENST00000626119 KIAA0586Q9BVV6 1533 aa29.45■■■□□ 2.31
COPS7A-222ENST00000626119 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
COPS7A-222ENST00000626119 SUPT6HQ7KZ85 1726 aaKnown RBP29.43■■■□□ 2.3
COPS7A-222ENST00000626119 MAGI1Q96QZ7 1491 aaPredicted RBP29.41■■■□□ 2.3
COPS7A-222ENST00000626119 NCOA2Q15596 1464 aa29.39■■■□□ 2.3
COPS7A-222ENST00000626119 GRIN2AQ12879 1464 aa29.38■■■□□ 2.29
COPS7A-222ENST00000626119 MYOM3Q5VTT5 1437 aa29.37■■■□□ 2.29
COPS7A-222ENST00000626119 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
COPS7A-222ENST00000626119 EPRSP07814 1512 aaKnown RBP29.31■■■□□ 2.28
COPS7A-222ENST00000626119 MAPKBP1O60336 1514 aa29.3■■■□□ 2.28
COPS7A-222ENST00000626119 KIAA0556O60303 1618 aa29.28■■■□□ 2.28
COPS7A-222ENST00000626119 SYNJ2O15056 1496 aa29.28■■■□□ 2.28
COPS7A-222ENST00000626119 DISP1Q96F81 1524 aa29.25■■■□□ 2.27
COPS7A-222ENST00000626119 MAGI3Q5TCQ9 1506 aa29.24■■■□□ 2.27
COPS7A-222ENST00000626119 TIMELESSQ9UNS1 1208 aa29.23■■■□□ 2.27
COPS7A-222ENST00000626119 HFM1A2PYH4 1435 aa29.22■■■□□ 2.27
COPS7A-222ENST00000626119 TCOF1Q13428 1488 aaKnown RBP29.21■■■□□ 2.27
COPS7A-222ENST00000626119 PTPN23Q9H3S7 1636 aa29.2■■■□□ 2.26
COPS7A-222ENST00000626119 MIA2Q96PC5 1412 aa29.18■■■□□ 2.26
COPS7A-222ENST00000626119 CHMP7Q8WUX9 453 aaPredicted RBP29.18■■■□□ 2.26
COPS7A-222ENST00000626119 NUP160Q12769 1436 aa29.13■■■□□ 2.25
COPS7A-222ENST00000626119 RAPGEF6Q8TEU7 1601 aa29.12■■■□□ 2.25
COPS7A-222ENST00000626119 CEP170Q5SW79 1584 aa29.12■■■□□ 2.25
COPS7A-222ENST00000626119 CDK13Q14004 1512 aaKnown RBP29.11■■■□□ 2.25
COPS7A-222ENST00000626119 PTPRKQ15262 1439 aa29.11■■■□□ 2.25
COPS7A-222ENST00000626119 CENPBP07199 599 aaPredicted RBP29.09■■■□□ 2.25
COPS7A-222ENST00000626119 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
COPS7A-222ENST00000626119 CDK11AQ9UQ88 783 aaPredicted RBP29.08■■■□□ 2.25
COPS7A-222ENST00000626119 UACAQ9BZF9 1416 aa29.08■■■□□ 2.25
COPS7A-222ENST00000626119 CARMIL2Q6F5E8 1435 aa29.08■■■□□ 2.25
COPS7A-222ENST00000626119 NAIPQ13075 1403 aa29.07■■■□□ 2.24
COPS7A-222ENST00000626119 NUP153P49790 1475 aaKnown RBP29.06■■■□□ 2.24
COPS7A-222ENST00000626119 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
COPS7A-222ENST00000626119 GCC2Q8IWJ2 1684 aa28.97■■■□□ 2.23
COPS7A-222ENST00000626119 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
COPS7A-222ENST00000626119 MIER1Q8N108 512 aa28.95■■■□□ 2.22
COPS7A-222ENST00000626119 FBLN2P98095 1184 aa28.94■■■□□ 2.22
COPS7A-222ENST00000626119 TROQ12816 1431 aaPredicted RBP28.92■■■□□ 2.22
COPS7A-222ENST00000626119 SIN3AQ96ST3 1273 aa28.91■■■□□ 2.22
COPS7A-222ENST00000626119 ROCK1Q13464 1354 aa28.88■■■□□ 2.21
COPS7A-222ENST00000626119 NEUROD1Q13562 356 aa28.88■■■□□ 2.21
COPS7A-222ENST00000626119 ADCY10Q96PN6 1610 aa28.86■■■□□ 2.21
COPS7A-222ENST00000626119 PLB1Q6P1J6 1458 aa28.85■■■□□ 2.21
COPS7A-222ENST00000626119 DNMT1P26358 1616 aaKnown RBP28.83■■■□□ 2.21
COPS7A-222ENST00000626119 PPP1R15AO75807 674 aaPredicted RBP28.83■■■□□ 2.21
COPS7A-222ENST00000626119 SCAF1Q9H7N4 1312 aaKnown RBP28.83■■■□□ 2.21
COPS7A-222ENST00000626119 ITSN2Q9NZM3 1697 aa28.83■■■□□ 2.21
COPS7A-222ENST00000626119 ARID3CA6NKF2 412 aa28.82■■■□□ 2.2
COPS7A-222ENST00000626119 DAPK1P53355 1430 aa28.82■■■□□ 2.2
COPS7A-222ENST00000626119 ABCA8O94911 1581 aa28.81■■■□□ 2.2
COPS7A-222ENST00000626119 TONSLQ96HA7 1378 aa28.79■■■□□ 2.2
COPS7A-222ENST00000626119 RRP7BPQ9NSQ0 103 aa28.78■■■□□ 2.2
COPS7A-222ENST00000626119 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
COPS7A-222ENST00000626119 ABCC5O15440 1437 aa28.75■■■□□ 2.19
COPS7A-222ENST00000626119 CHIC2Q9UKJ5 165 aa28.75■■■□□ 2.19
COPS7A-222ENST00000626119 GPATCH8Q9UKJ3 1502 aaKnown RBP28.71■■■□□ 2.19
COPS7A-222ENST00000626119 PLEKHD1A6NEE1 506 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms