RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ERCC6L2Q5T890 1561 aa38.07■■■■□ 3.69
SF1-220ENST00000626028 JPH4Q96JJ6 628 aa38.04■■■■□ 3.68
SF1-220ENST00000626028 PRG4Q92954 1404 aaPredicted RBP37.99■■■■□ 3.67
SF1-220ENST00000626028 RAPGEF2Q9Y4G8 1499 aa37.91■■■■□ 3.66
SF1-220ENST00000626028 IQGAP2Q13576 1575 aa37.82■■■■□ 3.65
SF1-220ENST00000626028 PRXQ9BXM0 1461 aa37.71■■■■□ 3.63
SF1-220ENST00000626028 CTTNBP2Q8WZ74 1663 aa37.69■■■■□ 3.62
SF1-220ENST00000626028 CARMIL2Q6F5E8 1435 aa37.68■■■■□ 3.62
SF1-220ENST00000626028 EEA1Q15075 1411 aa37.67■■■■□ 3.62
SF1-220ENST00000626028 TRHP20396 242 aaPredicted RBP37.65■■■■□ 3.62
SF1-220ENST00000626028 UGGT2Q9NYU1 1516 aa37.61■■■■□ 3.61
SF1-220ENST00000626028 CSRNP3Q8WYN3 585 aa37.53■■■■□ 3.6
SF1-220ENST00000626028 TNIKQ9UKE5 1360 aa37.53■■■■□ 3.6
SF1-220ENST00000626028 ADCY10Q96PN6 1610 aa37.52■■■■□ 3.6
SF1-220ENST00000626028 PTPRGP23470 1445 aa37.52■■■■□ 3.6
SF1-220ENST00000626028 DISP1Q96F81 1524 aa37.51■■■■□ 3.6
SF1-220ENST00000626028 KIAA0556O60303 1618 aa37.44■■■■□ 3.58
SF1-220ENST00000626028 NPM1P06748 294 aaKnown RBP eCLIP37.43■■■■□ 3.58
SF1-220ENST00000626028 MAPKBP1O60336 1514 aa37.41■■■■□ 3.58
SF1-220ENST00000626028 GOLGA3Q08378 1498 aa37.4■■■■□ 3.58
SF1-220ENST00000626028 CHIC1Q5VXU3 224 aa37.4■■■■□ 3.58
SF1-220ENST00000626028 UHRF1BP1LA0JNW5 1464 aa37.34■■■■□ 3.57
SF1-220ENST00000626028 KIF13AQ9H1H9 1805 aa37.34■■■■□ 3.57
SF1-220ENST00000626028 KIF21BO75037 1637 aa37.28■■■■□ 3.56
SF1-220ENST00000626028 UACAQ9BZF9 1416 aa37.27■■■■□ 3.56
SF1-220ENST00000626028 ABCC2Q92887 1545 aa37.27■■■■□ 3.56
SF1-220ENST00000626028 ABCC10Q5T3U5 1492 aa37.21■■■■□ 3.55
SF1-220ENST00000626028 TTBK1Q5TCY1 1321 aaPredicted RBP37.18■■■■□ 3.54
SF1-220ENST00000626028 DIP2BQ9P265 1576 aa37.16■■■■□ 3.54
SF1-220ENST00000626028 FAM9AQ8IZU1 332 aaPredicted RBP37.14■■■■□ 3.54
SF1-220ENST00000626028 KDM5BQ9UGL1 1544 aa37.13■■■■□ 3.53
SF1-220ENST00000626028 SAMD9Q5K651 1589 aa37.12■■■■□ 3.53
SF1-220ENST00000626028 PLB1Q6P1J6 1458 aa37.07■■■■□ 3.53
SF1-220ENST00000626028 ABCA8O94911 1581 aa37.06■■■■□ 3.52
SF1-220ENST00000626028 ZCCHC11Q5TAX3 1644 aaKnown RBP37.05■■■■□ 3.52
SF1-220ENST00000626028 FAM69CQ0P6D2 419 aa37.04■■■■□ 3.52
SF1-220ENST00000626028 ASXL2Q76L83 1435 aa37.02■■■■□ 3.52
SF1-220ENST00000626028 GLI2P10070 1586 aa36.95■■■■□ 3.51
SF1-220ENST00000626028 EFCAB5A4FU69 1503 aa36.93■■■■□ 3.5
SF1-220ENST00000626028 TSPOAP1O95153 1857 aa36.87■■■■□ 3.49
SF1-220ENST00000626028 P3H3Q8IVL6 736 aa36.84■■■■□ 3.49
SF1-220ENST00000626028 RAPGEF6Q8TEU7 1601 aa36.82■■■■□ 3.49
SF1-220ENST00000626028 WDR7Q9Y4E6 1490 aa36.82■■■■□ 3.48
SF1-220ENST00000626028 EPRSP07814 1512 aaKnown RBP36.81■■■■□ 3.48
SF1-220ENST00000626028 UBTFP17480 764 aaKnown RBP36.8■■■■□ 3.48
SF1-220ENST00000626028 MAP3K4Q9Y6R4 1608 aa36.77■■■■□ 3.48
SF1-220ENST00000626028 FHOD3Q2V2M9 1422 aa36.72■■■■□ 3.47
SF1-220ENST00000626028 PPRC1Q5VV67 1664 aaKnown RBP36.72■■■■□ 3.47
SF1-220ENST00000626028 ATP10BO94823 1461 aa36.7■■■■□ 3.47
SF1-220ENST00000626028 RANGAP1P46060 587 aaPredicted RBP36.69■■■■□ 3.46
SF1-220ENST00000626028 CFAP43Q8NDM7 1665 aa36.66■■■■□ 3.46
SF1-220ENST00000626028 KDM6BO15054 1643 aa36.65■■■■□ 3.46
SF1-220ENST00000626028 NUP153P49790 1475 aaKnown RBP36.62■■■■□ 3.45
SF1-220ENST00000626028 TEX14Q8IWB6 1497 aa36.62■■■■□ 3.45
SF1-220ENST00000626028 EHMT2Q96KQ7 1210 aa36.57■■■■□ 3.44
SF1-220ENST00000626028 ARHGAP35Q9NRY4 1499 aa36.56■■■■□ 3.44
SF1-220ENST00000626028 FMN1Q68DA7 1419 aa36.56■■■■□ 3.44
SF1-220ENST00000626028 MAGI3Q5TCQ9 1506 aa36.51■■■■□ 3.44
SF1-220ENST00000626028 KCNH8Q96L42 1107 aa36.49■■■■□ 3.43
SF1-220ENST00000626028 CD109Q6YHK3 1445 aa36.48■■■■□ 3.43
SF1-220ENST00000626028 ABCA9Q8IUA7 1624 aa36.47■■■■□ 3.43
SF1-220ENST00000626028 ARID3CA6NKF2 412 aa36.46■■■■□ 3.43
SF1-220ENST00000626028 HECW1Q76N89 1606 aa36.43■■■■□ 3.42
SF1-220ENST00000626028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.42■■■■□ 3.42
SF1-220ENST00000626028 HNRNPUL2Q1KMD3 747 aaKnown RBP36.42■■■■□ 3.42
SF1-220ENST00000626028 PLEKHD1A6NEE1 506 aa36.36■■■■□ 3.41
SF1-220ENST00000626028 PHLDB1Q86UU1 1377 aa36.27■■■■□ 3.4
SF1-220ENST00000626028 COL17A1Q9UMD9 1497 aaPredicted RBP36.27■■■■□ 3.4
SF1-220ENST00000626028 CDK13Q14004 1512 aaKnown RBP36.27■■■■□ 3.4
SF1-220ENST00000626028 CLIP1P30622 1438 aa36.25■■■■□ 3.39
SF1-220ENST00000626028 ARAP3Q8WWN8 1544 aa36.22■■■■□ 3.39
SF1-220ENST00000626028 LRRIQ1Q96JM4 1722 aa36.21■■■■□ 3.39
SF1-220ENST00000626028 CDK11AQ9UQ88 783 aaPredicted RBP36.21■■■■□ 3.39
SF1-220ENST00000626028 CASKIN1Q8WXD9 1431 aa36.2■■■■□ 3.39
SF1-220ENST00000626028 NEO1Q92859 1461 aa36.19■■■■□ 3.38
SF1-220ENST00000626028 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.17■■■■□ 3.381e-8■■■■□ 19.9
SF1-220ENST00000626028 PCF11O94913 1555 aaKnown RBP36.16■■■■□ 3.38
SF1-220ENST00000626028 ATP1B4Q9UN42 357 aaPredicted RBP36.16■■■■□ 3.38
SF1-220ENST00000626028 CCDC18Q5T9S5 1454 aa36.15■■■■□ 3.38
SF1-220ENST00000626028 CFAP74Q9C0B2 1584 aa36.14■■■■□ 3.38
SF1-220ENST00000626028 FYCO1Q9BQS8 1478 aa36.13■■■■□ 3.37
SF1-220ENST00000626028 TTC37Q6PGP7 1564 aa36.1■■■■□ 3.37
SF1-220ENST00000626028 TROQ12816 1431 aaPredicted RBP36.06■■■■□ 3.36
SF1-220ENST00000626028 KIF14Q15058 1648 aa36.05■■■■□ 3.36
SF1-220ENST00000626028 MYO5CQ9NQX4 1742 aa36.03■■■■□ 3.36
SF1-220ENST00000626028 AEBP2Q6ZN18 517 aaPredicted RBP36.02■■■■□ 3.36
SF1-220ENST00000626028 FANCAO15360 1455 aa36■■■■□ 3.35
SF1-220ENST00000626028 CEP162Q5TB80 1403 aa36■■■■□ 3.35
SF1-220ENST00000626028 PLCH2O75038 1416 aa35.97■■■■□ 3.35
SF1-220ENST00000626028 AKNAQ7Z591 1439 aa35.93■■■■□ 3.34
SF1-220ENST00000626028 RICTORQ6R327 1708 aa35.91■■■■□ 3.34
SF1-220ENST00000626028 FRMPD1Q5SYB0 1578 aa35.89■■■■□ 3.34
SF1-220ENST00000626028 DENND4BO75064 1496 aaPredicted RBP35.87■■■■□ 3.33
SF1-220ENST00000626028 KDM4FA0A1W2PPD8 638 aa35.82■■■■□ 3.32
SF1-220ENST00000626028 RAPGEF3O95398 923 aa35.82■■■■□ 3.32
SF1-220ENST00000626028 EFCAB2Q5VUJ9 269 aa35.81■■■■□ 3.32
SF1-220ENST00000626028 CDC42BPBQ9Y5S2 1711 aa35.8■■■■□ 3.32
SF1-220ENST00000626028 ADGRL1O94910 1474 aa35.79■■■■□ 3.32
SF1-220ENST00000626028 PREX2Q70Z35 1606 aa35.79■■■■□ 3.32
SF1-220ENST00000626028 LOC105371045A0A1W2PR82 267 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms