RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 RUSC2Q8N2Y8 1516 aa19.65■□□□□ 0.74
DDX41-218ENST00000625286 IGF1RP08069 1367 aa19.63■□□□□ 0.73
DDX41-218ENST00000625286 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
DDX41-218ENST00000625286 ADCY10Q96PN6 1610 aa19.54■□□□□ 0.72
DDX41-218ENST00000625286 FAM69CQ0P6D2 419 aa19.54■□□□□ 0.72
DDX41-218ENST00000625286 ABCC10Q5T3U5 1492 aa19.53■□□□□ 0.72
DDX41-218ENST00000625286 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
DDX41-218ENST00000625286 MAPKBP1O60336 1514 aa19.5■□□□□ 0.71
DDX41-218ENST00000625286 NPM1P06748 294 aaKnown RBP eCLIP19.48■□□□□ 0.71
DDX41-218ENST00000625286 CUL7Q14999 1698 aa19.47■□□□□ 0.71
DDX41-218ENST00000625286 DIP2BQ9P265 1576 aa19.47■□□□□ 0.71
DDX41-218ENST00000625286 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
DDX41-218ENST00000625286 PTPRGP23470 1445 aa19.4■□□□□ 0.7
DDX41-218ENST00000625286 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
DDX41-218ENST00000625286 TSPOAP1O95153 1857 aa19.37■□□□□ 0.69
DDX41-218ENST00000625286 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.69
DDX41-218ENST00000625286 KDM4FA0A1W2PPD8 638 aa19.32■□□□□ 0.68
DDX41-218ENST00000625286 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
DDX41-218ENST00000625286 DISP1Q96F81 1524 aa19.3■□□□□ 0.68
DDX41-218ENST00000625286 IQGAP2Q13576 1575 aa19.3■□□□□ 0.68
DDX41-218ENST00000625286 KDM6BO15054 1643 aa19.29■□□□□ 0.68
DDX41-218ENST00000625286 CARMIL2Q6F5E8 1435 aa19.29■□□□□ 0.68
DDX41-218ENST00000625286 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
DDX41-218ENST00000625286 UHRF1BP1LA0JNW5 1464 aa19.26■□□□□ 0.67
DDX41-218ENST00000625286 PPRC1Q5VV67 1664 aaKnown RBP19.25■□□□□ 0.67
DDX41-218ENST00000625286 UACAQ9BZF9 1416 aa19.24■□□□□ 0.67
DDX41-218ENST00000625286 RAPGEF2Q9Y4G8 1499 aa19.22■□□□□ 0.67
DDX41-218ENST00000625286 GLI2P10070 1586 aa19.22■□□□□ 0.67
DDX41-218ENST00000625286 PLB1Q6P1J6 1458 aa19.22■□□□□ 0.67
DDX41-218ENST00000625286 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
DDX41-218ENST00000625286 COL17A1Q9UMD9 1497 aaPredicted RBP19.19■□□□□ 0.66
DDX41-218ENST00000625286 KDM5BQ9UGL1 1544 aa19.19■□□□□ 0.66
DDX41-218ENST00000625286 EPRSP07814 1512 aaKnown RBP19.16■□□□□ 0.66
DDX41-218ENST00000625286 KIAA0556O60303 1618 aa19.15■□□□□ 0.66
DDX41-218ENST00000625286 ZCCHC11Q5TAX3 1644 aaKnown RBP19.13■□□□□ 0.65
DDX41-218ENST00000625286 MAP3K4Q9Y6R4 1608 aa19.12■□□□□ 0.65
DDX41-218ENST00000625286 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
DDX41-218ENST00000625286 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
DDX41-218ENST00000625286 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
DDX41-218ENST00000625286 WDR7Q9Y4E6 1490 aa19.03■□□□□ 0.64
DDX41-218ENST00000625286 ABCA8O94911 1581 aa19.02■□□□□ 0.63
DDX41-218ENST00000625286 TEX14Q8IWB6 1497 aa18.99■□□□□ 0.63
DDX41-218ENST00000625286 KCNH8Q96L42 1107 aa18.99■□□□□ 0.63
DDX41-218ENST00000625286 GOLGA3Q08378 1498 aa18.97■□□□□ 0.63
DDX41-218ENST00000625286 CD109Q6YHK3 1445 aa18.95■□□□□ 0.62
DDX41-218ENST00000625286 MAGI3Q5TCQ9 1506 aa18.94■□□□□ 0.62
DDX41-218ENST00000625286 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
DDX41-218ENST00000625286 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
DDX41-218ENST00000625286 CFAP43Q8NDM7 1665 aa18.91■□□□□ 0.62
DDX41-218ENST00000625286 ATP10BO94823 1461 aa18.89■□□□□ 0.61
DDX41-218ENST00000625286 ILDR1Q86SU0 546 aaPredicted RBP18.84■□□□□ 0.61
DDX41-218ENST00000625286 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
DDX41-218ENST00000625286 HECW2Q9P2P5 1572 aa18.81■□□□□ 0.6
DDX41-218ENST00000625286 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
DDX41-218ENST00000625286 ARAP3Q8WWN8 1544 aa18.8■□□□□ 0.6
DDX41-218ENST00000625286 KIF21BO75037 1637 aa18.78■□□□□ 0.6
DDX41-218ENST00000625286 ABCA9Q8IUA7 1624 aa18.77■□□□□ 0.6
DDX41-218ENST00000625286 RAPGEF3O95398 923 aa18.75■□□□□ 0.59
DDX41-218ENST00000625286 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
DDX41-218ENST00000625286 RANGAP1P46060 587 aaPredicted RBP18.73■□□□□ 0.59
DDX41-218ENST00000625286 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
DDX41-218ENST00000625286 FHOD3Q2V2M9 1422 aa18.7■□□□□ 0.58
DDX41-218ENST00000625286 FAM9AQ8IZU1 332 aaPredicted RBP18.69■□□□□ 0.58
DDX41-218ENST00000625286 PHLDB1Q86UU1 1377 aa18.68■□□□□ 0.58
DDX41-218ENST00000625286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.68■□□□□ 0.58
DDX41-218ENST00000625286 HNRNPUL2Q1KMD3 747 aaKnown RBP18.68■□□□□ 0.58
DDX41-218ENST00000625286 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
DDX41-218ENST00000625286 NEO1Q92859 1461 aa18.66■□□□□ 0.58
DDX41-218ENST00000625286 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
DDX41-218ENST00000625286 EEA1Q15075 1411 aa18.63■□□□□ 0.57
DDX41-218ENST00000625286 PTPRMP28827 1452 aa18.62■□□□□ 0.57
DDX41-218ENST00000625286 PLEKHD1A6NEE1 506 aa18.6■□□□□ 0.57
DDX41-218ENST00000625286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.56
DDX41-218ENST00000625286 BCORL1Q5H9F3 1711 aa18.57■□□□□ 0.56
DDX41-218ENST00000625286 AKNAQ7Z591 1439 aa18.57■□□□□ 0.56
DDX41-218ENST00000625286 RICTORQ6R327 1708 aa18.56■□□□□ 0.56
DDX41-218ENST00000625286 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
DDX41-218ENST00000625286 ARID4BQ4LE39 1312 aaPredicted RBP18.54■□□□□ 0.56
DDX41-218ENST00000625286 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
DDX41-218ENST00000625286 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
DDX41-218ENST00000625286 FANCAO15360 1455 aa18.53■□□□□ 0.56
DDX41-218ENST00000625286 SIGLEC1Q9BZZ2 1709 aa18.53■□□□□ 0.56
DDX41-218ENST00000625286 CDK13Q14004 1512 aaKnown RBP18.53■□□□□ 0.56
DDX41-218ENST00000625286 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
DDX41-218ENST00000625286 EFCAB5A4FU69 1503 aa18.52■□□□□ 0.56
DDX41-218ENST00000625286 ARHGEF40Q8TER5 1519 aa18.5■□□□□ 0.55
DDX41-218ENST00000625286 YEATS2Q9ULM3 1422 aa18.49■□□□□ 0.55
DDX41-218ENST00000625286 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
DDX41-218ENST00000625286 RIMS1Q86UR5 1692 aaKnown RBP18.46■□□□□ 0.55
DDX41-218ENST00000625286 ZMYM4Q5VZL5 1548 aa18.45■□□□□ 0.54
DDX41-218ENST00000625286 PLCH2O75038 1416 aa18.45■□□□□ 0.54
DDX41-218ENST00000625286 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
DDX41-218ENST00000625286 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
DDX41-218ENST00000625286 CFAP74Q9C0B2 1584 aa18.43■□□□□ 0.54
DDX41-218ENST00000625286 SCAPERQ9BY12 1400 aa18.43■□□□□ 0.54
DDX41-218ENST00000625286 HECW1Q76N89 1606 aa18.43■□□□□ 0.54
DDX41-218ENST00000625286 UBTFP17480 764 aaKnown RBP18.43■□□□□ 0.54
DDX41-218ENST00000625286 FBXO41Q8TF61 875 aa18.42■□□□□ 0.54
DDX41-218ENST00000625286 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
DDX41-218ENST00000625286 HSPA2P54652 639 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms