RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 CHMP7Q8WUX9 453 aaPredicted RBP18.1■□□□□ 0.49
ATRX-213ENST00000624032 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
ATRX-213ENST00000624032 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
ATRX-213ENST00000624032 CLIP1P30622 1438 aa18.06■□□□□ 0.48
ATRX-213ENST00000624032 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
ATRX-213ENST00000624032 CTTNBP2Q8WZ74 1663 aa18.03■□□□□ 0.48
ATRX-213ENST00000624032 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
ATRX-213ENST00000624032 CHD1O14646 1710 aa17.99■□□□□ 0.47
ATRX-213ENST00000624032 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
ATRX-213ENST00000624032 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
ATRX-213ENST00000624032 ARHGAP35Q9NRY4 1499 aa17.96■□□□□ 0.47
ATRX-213ENST00000624032 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
ATRX-213ENST00000624032 ARAP1Q96P48 1450 aa17.93■□□□□ 0.46
ATRX-213ENST00000624032 IQGAP2Q13576 1575 aa17.93■□□□□ 0.46
ATRX-213ENST00000624032 NUP160Q12769 1436 aa17.92■□□□□ 0.46
ATRX-213ENST00000624032 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
ATRX-213ENST00000624032 FHOD3Q2V2M9 1422 aa17.87■□□□□ 0.45
ATRX-213ENST00000624032 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
ATRX-213ENST00000624032 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
ATRX-213ENST00000624032 SAMD9Q5K651 1589 aa17.83■□□□□ 0.45
ATRX-213ENST00000624032 EFCAB5A4FU69 1503 aa17.83■□□□□ 0.45
ATRX-213ENST00000624032 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
ATRX-213ENST00000624032 TTBK1Q5TCY1 1321 aaPredicted RBP17.81■□□□□ 0.44
ATRX-213ENST00000624032 DISP1Q96F81 1524 aa17.79■□□□□ 0.44
ATRX-213ENST00000624032 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
ATRX-213ENST00000624032 ATP1B4Q9UN42 357 aaPredicted RBP17.75■□□□□ 0.43
ATRX-213ENST00000624032 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
ATRX-213ENST00000624032 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
ATRX-213ENST00000624032 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
ATRX-213ENST00000624032 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.42
ATRX-213ENST00000624032 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
ATRX-213ENST00000624032 CARMIL2Q6F5E8 1435 aa17.7■□□□□ 0.42
ATRX-213ENST00000624032 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
ATRX-213ENST00000624032 SHROOM2Q13796 1616 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 FMN1Q68DA7 1419 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 APLP2Q06481 763 aa17.69■□□□□ 0.42
ATRX-213ENST00000624032 CASKIN1Q8WXD9 1431 aa17.65■□□□□ 0.42
ATRX-213ENST00000624032 ARID3CA6NKF2 412 aa17.64■□□□□ 0.41
ATRX-213ENST00000624032 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
ATRX-213ENST00000624032 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
ATRX-213ENST00000624032 PLB1Q6P1J6 1458 aa17.6■□□□□ 0.41
ATRX-213ENST00000624032 LRRIQ1Q96JM4 1722 aa17.59■□□□□ 0.41
ATRX-213ENST00000624032 PTPRGP23470 1445 aa17.59■□□□□ 0.41
ATRX-213ENST00000624032 TIAM1Q13009 1591 aa17.57■□□□□ 0.4
ATRX-213ENST00000624032 RAPGEF6Q8TEU7 1601 aa17.55■□□□□ 0.4
ATRX-213ENST00000624032 HECW1Q76N89 1606 aa17.54■□□□□ 0.4
ATRX-213ENST00000624032 CDK13Q14004 1512 aaKnown RBP17.53■□□□□ 0.4
ATRX-213ENST00000624032 NUP153P49790 1475 aaKnown RBP17.53■□□□□ 0.4
ATRX-213ENST00000624032 CFAP43Q8NDM7 1665 aa17.52■□□□□ 0.4
ATRX-213ENST00000624032 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.39
ATRX-213ENST00000624032 ABCA8O94911 1581 aa17.51■□□□□ 0.39
ATRX-213ENST00000624032 MAP3K1Q13233 1512 aa17.51■□□□□ 0.39
ATRX-213ENST00000624032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.5■□□□□ 0.39
ATRX-213ENST00000624032 HNRNPUL2Q1KMD3 747 aaKnown RBP17.5■□□□□ 0.39
ATRX-213ENST00000624032 LRRC9Q6ZRR7 1453 aa17.5■□□□□ 0.39
ATRX-213ENST00000624032 UACAQ9BZF9 1416 aa17.47■□□□□ 0.39
ATRX-213ENST00000624032 CCDC18Q5T9S5 1454 aa17.46■□□□□ 0.39
ATRX-213ENST00000624032 MAGI3Q5TCQ9 1506 aa17.45■□□□□ 0.38
ATRX-213ENST00000624032 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
ATRX-213ENST00000624032 ATP10BO94823 1461 aa17.43■□□□□ 0.38
ATRX-213ENST00000624032 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
ATRX-213ENST00000624032 ABCC2Q92887 1545 aa17.4■□□□□ 0.38
ATRX-213ENST00000624032 ACIN1Q9UKV3 1341 aaKnown RBP17.39■□□□□ 0.37
ATRX-213ENST00000624032 PHLDB1Q86UU1 1377 aa17.37■□□□□ 0.37
ATRX-213ENST00000624032 EHBP1L1Q8N3D4 1523 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 ADCY10Q96PN6 1610 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
ATRX-213ENST00000624032 CDK11AQ9UQ88 783 aaPredicted RBP17.36■□□□□ 0.37
ATRX-213ENST00000624032 UHRF1BP1LA0JNW5 1464 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 NCOA2Q15596 1464 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 PLEKHD1A6NEE1 506 aa17.34■□□□□ 0.37
ATRX-213ENST00000624032 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
ATRX-213ENST00000624032 TROQ12816 1431 aaPredicted RBP17.31■□□□□ 0.36
ATRX-213ENST00000624032 ZCCHC11Q5TAX3 1644 aaKnown RBP17.31■□□□□ 0.36
ATRX-213ENST00000624032 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
ATRX-213ENST00000624032 KDM5BQ9UGL1 1544 aa17.3■□□□□ 0.36
ATRX-213ENST00000624032 KIF14Q15058 1648 aa17.29■□□□□ 0.36
ATRX-213ENST00000624032 MYT1Q01538 1121 aa17.28■□□□□ 0.36
ATRX-213ENST00000624032 CCER1Q8TC90 406 aaPredicted RBP17.27■□□□□ 0.35
ATRX-213ENST00000624032 KCNH8Q96L42 1107 aa17.27■□□□□ 0.35
ATRX-213ENST00000624032 RRBP1Q9P2E9 1410 aaKnown RBP17.26■□□□□ 0.35
ATRX-213ENST00000624032 CCNB3Q8WWL7 1395 aa17.25■□□□□ 0.35
ATRX-213ENST00000624032 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
ATRX-213ENST00000624032 FAM50AQ14320 339 aaKnown RBP17.24■□□□□ 0.35
ATRX-213ENST00000624032 MYOM3Q5VTT5 1437 aa17.23■□□□□ 0.35
ATRX-213ENST00000624032 ITGAEP38570 1179 aa17.23■□□□□ 0.35
ATRX-213ENST00000624032 NPM1P06748 294 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATRX-213ENST00000624032 FGD6Q6ZV73 1430 aa17.22■□□□□ 0.35
ATRX-213ENST00000624032 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
ATRX-213ENST00000624032 DIEXFQ68CQ4 756 aaKnown RBP17.19■□□□□ 0.34
ATRX-213ENST00000624032 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
ATRX-213ENST00000624032 ASXL2Q76L83 1435 aa17.18■□□□□ 0.34
ATRX-213ENST00000624032 GPATCH8Q9UKJ3 1502 aaKnown RBP17.17■□□□□ 0.34
ATRX-213ENST00000624032 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
ATRX-213ENST00000624032 WDR7Q9Y4E6 1490 aa17.16■□□□□ 0.34
ATRX-213ENST00000624032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.15■□□□□ 0.34
ATRX-213ENST00000624032 PTPN23Q9H3S7 1636 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms