RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 EFCAB5A4FU69 1503 aa34.14■■■■□ 3.06
NKX2-3-202ENST00000622383 P3H3Q8IVL6 736 aa34.13■■■■□ 3.05
NKX2-3-202ENST00000622383 CCNB3Q8WWL7 1395 aa34.12■■■■□ 3.05
NKX2-3-202ENST00000622383 CTTNBP2Q8WZ74 1663 aa34.11■■■■□ 3.05
NKX2-3-202ENST00000622383 FHOD3Q2V2M9 1422 aa34.1■■■■□ 3.05
NKX2-3-202ENST00000622383 TARBP1Q13395 1621 aaKnown RBP34.1■■■■□ 3.05
NKX2-3-202ENST00000622383 LRRC9Q6ZRR7 1453 aa34.08■■■■□ 3.05
NKX2-3-202ENST00000622383 PCF11O94913 1555 aaKnown RBP34.08■■■■□ 3.05
NKX2-3-202ENST00000622383 CFAP43Q8NDM7 1665 aa34.01■■■■□ 3.03
NKX2-3-202ENST00000622383 AQRO60306 1485 aaKnown RBP eCLIP33.99■■■■□ 3.03
NKX2-3-202ENST00000622383 FYCO1Q9BQS8 1478 aa33.98■■■■□ 3.03
NKX2-3-202ENST00000622383 CASKIN1Q8WXD9 1431 aa33.98■■■■□ 3.03
NKX2-3-202ENST00000622383 MRC2Q9UBG0 1479 aa33.97■■■■□ 3.03
NKX2-3-202ENST00000622383 DHX57Q6P158 1386 aaKnown RBP33.95■■■■□ 3.03
NKX2-3-202ENST00000622383 PHLDB1Q86UU1 1377 aa33.92■■■■□ 3.02
NKX2-3-202ENST00000622383 CLSPNQ9HAW4 1339 aa33.91■■■■□ 3.02
NKX2-3-202ENST00000622383 FMN1Q68DA7 1419 aa33.89■■■■□ 3.02
NKX2-3-202ENST00000622383 SAMD9Q5K651 1589 aa33.89■■■■□ 3.02
NKX2-3-202ENST00000622383 DIEXFQ68CQ4 756 aaKnown RBP33.89■■■■□ 3.02
NKX2-3-202ENST00000622383 ATP1B4Q9UN42 357 aaPredicted RBP33.87■■■■□ 3.01
NKX2-3-202ENST00000622383 ZNF316A6NFI3 1004 aaPredicted RBP33.86■■■■□ 3.01
NKX2-3-202ENST00000622383 SNAPC4Q5SXM2 1469 aa33.85■■■■□ 3.01
NKX2-3-202ENST00000622383 PBRM1Q86U86 1689 aa33.81■■■■□ 3
NKX2-3-202ENST00000622383 ITGAEP38570 1179 aa33.81■■■■□ 3
NKX2-3-202ENST00000622383 WDR62O43379 1518 aa33.74■■■□□ 2.99
NKX2-3-202ENST00000622383 ADAMTS12P58397 1594 aa33.73■■■□□ 2.99
NKX2-3-202ENST00000622383 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
NKX2-3-202ENST00000622383 IFT140Q96RY7 1462 aa33.71■■■□□ 2.99
NKX2-3-202ENST00000622383 RAB3GAP2Q9H2M9 1393 aa33.67■■■□□ 2.98
NKX2-3-202ENST00000622383 ZNF608Q9ULD9 1512 aaPredicted RBP33.66■■■□□ 2.98
NKX2-3-202ENST00000622383 FAM50AQ14320 339 aaKnown RBP33.65■■■□□ 2.98
NKX2-3-202ENST00000622383 ERCC6Q03468 1493 aa33.62■■■□□ 2.97
NKX2-3-202ENST00000622383 SETD5Q9C0A6 1442 aa33.61■■■□□ 2.97
NKX2-3-202ENST00000622383 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.61■■■□□ 2.97
NKX2-3-202ENST00000622383 THOC2Q8NI27 1593 aaKnown RBP33.6■■■□□ 2.97
NKX2-3-202ENST00000622383 LRRIQ1Q96JM4 1722 aa33.6■■■□□ 2.97
NKX2-3-202ENST00000622383 IQGAP2Q13576 1575 aa33.59■■■□□ 2.97
NKX2-3-202ENST00000622383 MTUS2Q5JR59 1369 aa33.57■■■□□ 2.96
NKX2-3-202ENST00000622383 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
NKX2-3-202ENST00000622383 MAPKBP1O60336 1514 aa33.48■■■□□ 2.95
NKX2-3-202ENST00000622383 NCOA2Q15596 1464 aa33.45■■■□□ 2.95
NKX2-3-202ENST00000622383 UGGT2Q9NYU1 1516 aa33.45■■■□□ 2.94
NKX2-3-202ENST00000622383 EHBP1L1Q8N3D4 1523 aa33.44■■■□□ 2.94
NKX2-3-202ENST00000622383 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
NKX2-3-202ENST00000622383 CCDC18Q5T9S5 1454 aa33.42■■■□□ 2.94
NKX2-3-202ENST00000622383 MAGI3Q5TCQ9 1506 aa33.4■■■□□ 2.94
NKX2-3-202ENST00000622383 MYOM3Q5VTT5 1437 aa33.39■■■□□ 2.94
NKX2-3-202ENST00000622383 HECW1Q76N89 1606 aa33.38■■■□□ 2.93
NKX2-3-202ENST00000622383 KIAA0586Q9BVV6 1533 aa33.38■■■□□ 2.93
NKX2-3-202ENST00000622383 SUPT6HQ7KZ85 1726 aaKnown RBP33.37■■■□□ 2.93
NKX2-3-202ENST00000622383 ARHGEF11O15085 1522 aa33.36■■■□□ 2.93
NKX2-3-202ENST00000622383 GRIN2AQ12879 1464 aa33.35■■■□□ 2.93
NKX2-3-202ENST00000622383 EPRSP07814 1512 aaKnown RBP33.32■■■□□ 2.93
NKX2-3-202ENST00000622383 PTPRKQ15262 1439 aa33.31■■■□□ 2.92
NKX2-3-202ENST00000622383 DISP1Q96F81 1524 aa33.29■■■□□ 2.92
NKX2-3-202ENST00000622383 MAGI1Q96QZ7 1491 aaPredicted RBP33.26■■■□□ 2.92
NKX2-3-202ENST00000622383 KIAA0556O60303 1618 aa33.25■■■□□ 2.91
NKX2-3-202ENST00000622383 MIER1Q8N108 512 aa33.24■■■□□ 2.91
NKX2-3-202ENST00000622383 CDK13Q14004 1512 aaKnown RBP33.24■■■□□ 2.91
NKX2-3-202ENST00000622383 SCAF1Q9H7N4 1312 aaKnown RBP33.22■■■□□ 2.91
NKX2-3-202ENST00000622383 HFM1A2PYH4 1435 aa33.22■■■□□ 2.91
NKX2-3-202ENST00000622383 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.91
NKX2-3-202ENST00000622383 ACIN1Q9UKV3 1341 aaKnown RBP33.2■■■□□ 2.9
NKX2-3-202ENST00000622383 SYNJ2O15056 1496 aa33.18■■■□□ 2.9
NKX2-3-202ENST00000622383 NEUROD1Q13562 356 aa33.17■■■□□ 2.9
NKX2-3-202ENST00000622383 TCOF1Q13428 1488 aaKnown RBP33.16■■■□□ 2.9
NKX2-3-202ENST00000622383 SIN3AQ96ST3 1273 aa33.15■■■□□ 2.9
NKX2-3-202ENST00000622383 CHMP7Q8WUX9 453 aaPredicted RBP33.14■■■□□ 2.9
NKX2-3-202ENST00000622383 CEP170Q5SW79 1584 aa33.13■■■□□ 2.89
NKX2-3-202ENST00000622383 NAIPQ13075 1403 aa33.13■■■□□ 2.89
NKX2-3-202ENST00000622383 ARID3CA6NKF2 412 aa33.11■■■□□ 2.89
NKX2-3-202ENST00000622383 CENPBP07199 599 aaPredicted RBP33.1■■■□□ 2.89
NKX2-3-202ENST00000622383 NUP153P49790 1475 aaKnown RBP33.09■■■□□ 2.89
NKX2-3-202ENST00000622383 MIA2Q96PC5 1412 aa33.06■■■□□ 2.88
NKX2-3-202ENST00000622383 UACAQ9BZF9 1416 aa33.06■■■□□ 2.88
NKX2-3-202ENST00000622383 TIMELESSQ9UNS1 1208 aa33.05■■■□□ 2.88
NKX2-3-202ENST00000622383 RAPGEF6Q8TEU7 1601 aa33.04■■■□□ 2.88
NKX2-3-202ENST00000622383 NUP160Q12769 1436 aa33.04■■■□□ 2.88
NKX2-3-202ENST00000622383 FBLN2P98095 1184 aa33.01■■■□□ 2.87
NKX2-3-202ENST00000622383 AKNAQ7Z591 1439 aa32.93■■■□□ 2.86
NKX2-3-202ENST00000622383 JPH4Q96JJ6 628 aa32.92■■■□□ 2.86
NKX2-3-202ENST00000622383 RRP7BPQ9NSQ0 103 aa32.91■■■□□ 2.86
NKX2-3-202ENST00000622383 CHIC2Q9UKJ5 165 aa32.91■■■□□ 2.86
NKX2-3-202ENST00000622383 PLB1Q6P1J6 1458 aa32.9■■■□□ 2.86
NKX2-3-202ENST00000622383 YTHDC1Q96MU7 727 aaKnown RBP32.89■■■□□ 2.85
NKX2-3-202ENST00000622383 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.85
NKX2-3-202ENST00000622383 CARMIL2Q6F5E8 1435 aa32.88■■■□□ 2.85
NKX2-3-202ENST00000622383 GCC2Q8IWJ2 1684 aa32.88■■■□□ 2.85
NKX2-3-202ENST00000622383 PPP1R15AO75807 674 aaPredicted RBP32.87■■■□□ 2.85
NKX2-3-202ENST00000622383 TROQ12816 1431 aaPredicted RBP32.83■■■□□ 2.85
NKX2-3-202ENST00000622383 PRG4Q92954 1404 aaPredicted RBP32.82■■■□□ 2.84
NKX2-3-202ENST00000622383 KDM6BO15054 1643 aa32.79■■■□□ 2.84
NKX2-3-202ENST00000622383 DAPK1P53355 1430 aa32.79■■■□□ 2.84
NKX2-3-202ENST00000622383 ZNF644Q9H582 1327 aaPredicted RBP32.76■■■□□ 2.84
NKX2-3-202ENST00000622383 ABCC5O15440 1437 aa32.76■■■□□ 2.83
NKX2-3-202ENST00000622383 TONSLQ96HA7 1378 aa32.76■■■□□ 2.83
NKX2-3-202ENST00000622383 DENND4BO75064 1496 aaPredicted RBP32.75■■■□□ 2.83
NKX2-3-202ENST00000622383 ROCK1Q13464 1354 aa32.74■■■□□ 2.83
NKX2-3-202ENST00000622383 DNMT1P26358 1616 aaKnown RBP32.74■■■□□ 2.83
NKX2-3-202ENST00000622383 GTF3C3Q9Y5Q9 886 aa32.72■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms