RNA–Protein interactions for RNA: ENST00000621850.4

NCAM1-230, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene NCAM1, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-230ENST00000621850 P3H3Q8IVL6 736 aa17.09■□□□□ 0.33
NCAM1-230ENST00000621850 TIAM1Q13009 1591 aa17.08■□□□□ 0.33
NCAM1-230ENST00000621850 CARMIL1Q5VZK9 1371 aa17.07■□□□□ 0.32
NCAM1-230ENST00000621850 PHLDB1Q86UU1 1377 aa17.06■□□□□ 0.32
NCAM1-230ENST00000621850 LRRC9Q6ZRR7 1453 aa17.05■□□□□ 0.32
NCAM1-230ENST00000621850 BCANQ96GW7 911 aa17.04■□□□□ 0.32
NCAM1-230ENST00000621850 TSHZ2Q9NRE2 1034 aa17.04■□□□□ 0.32
NCAM1-230ENST00000621850 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.31
NCAM1-230ENST00000621850 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
NCAM1-230ENST00000621850 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
NCAM1-230ENST00000621850 FGD5Q6ZNL6 1462 aa16.98■□□□□ 0.31
NCAM1-230ENST00000621850 FHAD1B1AJZ9 1412 aa16.98■□□□□ 0.31
NCAM1-230ENST00000621850 FKBP8Q14318 412 aa16.98■□□□□ 0.31
NCAM1-230ENST00000621850 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
NCAM1-230ENST00000621850 PPP1R15AO75807 674 aaPredicted RBP16.93■□□□□ 0.3
NCAM1-230ENST00000621850 PCF11O94913 1555 aaKnown RBP16.93■□□□□ 0.3
NCAM1-230ENST00000621850 FHOD3Q2V2M9 1422 aa16.92■□□□□ 0.3
NCAM1-230ENST00000621850 TRIM52Q96A61 297 aa16.91■□□□□ 0.3
NCAM1-230ENST00000621850 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
NCAM1-230ENST00000621850 PHF23Q9BUL5 403 aaPredicted RBP16.91■□□□□ 0.3
NCAM1-230ENST00000621850 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
NCAM1-230ENST00000621850 ANP32CO43423 234 aa16.9■□□□□ 0.3
NCAM1-230ENST00000621850 NEFLP07196 543 aa16.89■□□□□ 0.29
NCAM1-230ENST00000621850 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
NCAM1-230ENST00000621850 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
NCAM1-230ENST00000621850 CCER2I3L3R5 266 aa16.83■□□□□ 0.28
NCAM1-230ENST00000621850 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.28
NCAM1-230ENST00000621850 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
NCAM1-230ENST00000621850 RAD54L2Q9Y4B4 1467 aa16.82■□□□□ 0.28
NCAM1-230ENST00000621850 CASKIN1Q8WXD9 1431 aa16.81■□□□□ 0.28
NCAM1-230ENST00000621850 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
NCAM1-230ENST00000621850 FGD6Q6ZV73 1430 aa16.79■□□□□ 0.28
NCAM1-230ENST00000621850 MTUS2Q5JR59 1369 aa16.78■□□□□ 0.28
NCAM1-230ENST00000621850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.77■□□□□ 0.28
NCAM1-230ENST00000621850 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
NCAM1-230ENST00000621850 EFCAB5A4FU69 1503 aa16.76■□□□□ 0.27
NCAM1-230ENST00000621850 FMN1Q68DA7 1419 aa16.74■□□□□ 0.27
NCAM1-230ENST00000621850 AQRO60306 1485 aaKnown RBP eCLIP16.74■□□□□ 0.27
NCAM1-230ENST00000621850 POLA1P09884 1462 aaPredicted RBP16.73■□□□□ 0.27
NCAM1-230ENST00000621850 PTPRKQ15262 1439 aa16.72■□□□□ 0.27
NCAM1-230ENST00000621850 ABCA10Q8WWZ4 1543 aa16.72■□□□□ 0.27
NCAM1-230ENST00000621850 UACAQ9BZF9 1416 aa16.72■□□□□ 0.27
NCAM1-230ENST00000621850 RBM19Q9Y4C8 960 aaKnown RBP16.72■□□□□ 0.27
NCAM1-230ENST00000621850 DNMBPQ6XZF7 1577 aa16.7■□□□□ 0.26
NCAM1-230ENST00000621850 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
NCAM1-230ENST00000621850 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
NCAM1-230ENST00000621850 HNRNPUQ00839 825 aaKnown RBP eCLIP16.69■□□□□ 0.26
NCAM1-230ENST00000621850 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
NCAM1-230ENST00000621850 CTTNBP2Q8WZ74 1663 aa16.67■□□□□ 0.26
NCAM1-230ENST00000621850 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
NCAM1-230ENST00000621850 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
NCAM1-230ENST00000621850 NAIPQ13075 1403 aa16.66■□□□□ 0.26
NCAM1-230ENST00000621850 CUL7Q14999 1698 aa16.66■□□□□ 0.26
NCAM1-230ENST00000621850 RRP7BPQ9NSQ0 103 aa16.66■□□□□ 0.26
NCAM1-230ENST00000621850 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
NCAM1-230ENST00000621850 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
NCAM1-230ENST00000621850 NESP48681 1621 aa16.65■□□□□ 0.26
NCAM1-230ENST00000621850 IRX6P78412 446 aaPredicted RBP16.64■□□□□ 0.25
NCAM1-230ENST00000621850 MYOM3Q5VTT5 1437 aa16.64■□□□□ 0.25
NCAM1-230ENST00000621850 TDRD9Q8NDG6 1382 aaKnown RBP16.63■□□□□ 0.25
NCAM1-230ENST00000621850 HSPA5P11021 654 aaKnown RBP16.61■□□□□ 0.25
NCAM1-230ENST00000621850 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
NCAM1-230ENST00000621850 LRRIQ1Q96JM4 1722 aa16.57■□□□□ 0.24
NCAM1-230ENST00000621850 GRIN2BQ13224 1484 aa16.57■□□□□ 0.24
NCAM1-230ENST00000621850 SUPT6HQ7KZ85 1726 aaKnown RBP16.56■□□□□ 0.24
NCAM1-230ENST00000621850 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
NCAM1-230ENST00000621850 KDM5BQ9UGL1 1544 aa16.55■□□□□ 0.24
NCAM1-230ENST00000621850 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
NCAM1-230ENST00000621850 SAMD9Q5K651 1589 aa16.54■□□□□ 0.24
NCAM1-230ENST00000621850 EHBP1L1Q8N3D4 1523 aa16.54■□□□□ 0.24
NCAM1-230ENST00000621850 ARID3CA6NKF2 412 aa16.54■□□□□ 0.24
NCAM1-230ENST00000621850 CDK11AQ9UQ88 783 aaPredicted RBP16.53■□□□□ 0.24
NCAM1-230ENST00000621850 GAPVD1Q14C86 1478 aa16.53■□□□□ 0.24
NCAM1-230ENST00000621850 FOXD1Q16676 465 aa16.53■□□□□ 0.24
NCAM1-230ENST00000621850 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
NCAM1-230ENST00000621850 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
NCAM1-230ENST00000621850 UGGT2Q9NYU1 1516 aa16.51■□□□□ 0.23
NCAM1-230ENST00000621850 FAM9BQ8IZU0 186 aa16.5■□□□□ 0.23
NCAM1-230ENST00000621850 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
NCAM1-230ENST00000621850 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
NCAM1-230ENST00000621850 MAGI3Q5TCQ9 1506 aa16.49■□□□□ 0.23
NCAM1-230ENST00000621850 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
NCAM1-230ENST00000621850 MSH5O43196 834 aa16.48■□□□□ 0.23
NCAM1-230ENST00000621850 DENND4BO75064 1496 aaPredicted RBP16.47■□□□□ 0.23
NCAM1-230ENST00000621850 ABCA5Q8WWZ7 1642 aa16.46■□□□□ 0.23
NCAM1-230ENST00000621850 C11orf95C9JLR9 678 aaPredicted RBP16.46■□□□□ 0.23
NCAM1-230ENST00000621850 CNTLNQ9NXG0 1405 aa16.46■□□□□ 0.23
NCAM1-230ENST00000621850 MRS2Q9HD23 443 aa16.45■□□□□ 0.22
NCAM1-230ENST00000621850 KDM6BO15054 1643 aa16.45■□□□□ 0.22
NCAM1-230ENST00000621850 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
NCAM1-230ENST00000621850 PRKRIP1Q9H875 184 aaPredicted RBP16.44■□□□□ 0.22
NCAM1-230ENST00000621850 HECW1Q76N89 1606 aa16.43■□□□□ 0.22
NCAM1-230ENST00000621850 TCOF1Q13428 1488 aaKnown RBP16.43■□□□□ 0.22
NCAM1-230ENST00000621850 ERICH6Q7L0X2 663 aa16.43■□□□□ 0.22
NCAM1-230ENST00000621850 GCC2Q8IWJ2 1684 aa16.42■□□□□ 0.22
NCAM1-230ENST00000621850 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
NCAM1-230ENST00000621850 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
NCAM1-230ENST00000621850 CNGB1Q14028 1251 aaPredicted RBP16.41■□□□□ 0.22
NCAM1-230ENST00000621850 LAMC3Q9Y6N6 1575 aa16.41■□□□□ 0.22
NCAM1-230ENST00000621850 EPRSP07814 1512 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms