RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 ANP32CO43423 234 aa11.01□□□□□ -0.65
TDRD3-209ENST00000621840 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
TDRD3-209ENST00000621840 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
TDRD3-209ENST00000621840 PRKCSHP14314 528 aaPredicted RBP10.98□□□□□ -0.65
TDRD3-209ENST00000621840 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
TDRD3-209ENST00000621840 ARHGAP35Q9NRY4 1499 aa10.96□□□□□ -0.66
TDRD3-209ENST00000621840 CFAP43Q8NDM7 1665 aa10.96□□□□□ -0.66
TDRD3-209ENST00000621840 ITGAEP38570 1179 aa10.95□□□□□ -0.66
TDRD3-209ENST00000621840 DEKP35659 375 aaKnown RBP10.92□□□□□ -0.66
TDRD3-209ENST00000621840 KIF27Q86VH2 1401 aa10.92□□□□□ -0.66
TDRD3-209ENST00000621840 ATAD2BQ9ULI0 1458 aa10.92□□□□□ -0.66
TDRD3-209ENST00000621840 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
TDRD3-209ENST00000621840 PPP4R2Q9NY27 417 aa10.91□□□□□ -0.66
TDRD3-209ENST00000621840 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
TDRD3-209ENST00000621840 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.66
TDRD3-209ENST00000621840 LRRC9Q6ZRR7 1453 aa10.9□□□□□ -0.66
TDRD3-209ENST00000621840 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
TDRD3-209ENST00000621840 FHAD1B1AJZ9 1412 aa10.88□□□□□ -0.67
TDRD3-209ENST00000621840 NOP58Q9Y2X3 529 aaKnown RBP10.85□□□□□ -0.67
TDRD3-209ENST00000621840 CUX1P39880 1505 aa10.84□□□□□ -0.67
TDRD3-209ENST00000621840 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
TDRD3-209ENST00000621840 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
TDRD3-209ENST00000621840 PHLDB1Q86UU1 1377 aa10.83□□□□□ -0.68
TDRD3-209ENST00000621840 SIN3AQ96ST3 1273 aa10.83□□□□□ -0.68
TDRD3-209ENST00000621840 NCOA2Q15596 1464 aa10.83□□□□□ -0.68
TDRD3-209ENST00000621840 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
TDRD3-209ENST00000621840 UACAQ9BZF9 1416 aa10.79□□□□□ -0.68
TDRD3-209ENST00000621840 FYCO1Q9BQS8 1478 aa10.79□□□□□ -0.68
TDRD3-209ENST00000621840 PRDM2Q13029 1718 aa10.78□□□□□ -0.68
TDRD3-209ENST00000621840 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
TDRD3-209ENST00000621840 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
TDRD3-209ENST00000621840 AQRO60306 1485 aaKnown RBP eCLIP10.78□□□□□ -0.68
TDRD3-209ENST00000621840 KDM5BQ9UGL1 1544 aa10.78□□□□□ -0.68
TDRD3-209ENST00000621840 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.69
TDRD3-209ENST00000621840 ZBED9Q6R2W3 1325 aa10.77□□□□□ -0.69
TDRD3-209ENST00000621840 RTL5Q5HYW3 569 aaPredicted RBP10.77□□□□□ -0.69
TDRD3-209ENST00000621840 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
TDRD3-209ENST00000621840 EFCAB5A4FU69 1503 aa10.76□□□□□ -0.69
TDRD3-209ENST00000621840 NCAPD3P42695 1498 aa10.76□□□□□ -0.69
TDRD3-209ENST00000621840 HFM1A2PYH4 1435 aa10.76□□□□□ -0.69
TDRD3-209ENST00000621840 ABCA5Q8WWZ7 1642 aa10.75□□□□□ -0.69
TDRD3-209ENST00000621840 ANP32AP39687 249 aaKnown RBP10.75□□□□□ -0.69
TDRD3-209ENST00000621840 IRX6P78412 446 aaPredicted RBP10.75□□□□□ -0.69
TDRD3-209ENST00000621840 POLR1AO95602 1720 aaPredicted RBP10.74□□□□□ -0.69
TDRD3-209ENST00000621840 FAM50AQ14320 339 aaKnown RBP10.74□□□□□ -0.69
TDRD3-209ENST00000621840 HECW1Q76N89 1606 aa10.73□□□□□ -0.69
TDRD3-209ENST00000621840 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
TDRD3-209ENST00000621840 FGD6Q6ZV73 1430 aa10.72□□□□□ -0.69
TDRD3-209ENST00000621840 HIRIP3Q9BW71 556 aaPredicted RBP10.72□□□□□ -0.69
TDRD3-209ENST00000621840 SMG6Q86US8 1419 aaKnown RBP10.71□□□□□ -0.69
TDRD3-209ENST00000621840 CASKIN1Q8WXD9 1431 aa10.71□□□□□ -0.69
TDRD3-209ENST00000621840 FGD5Q6ZNL6 1462 aa10.71□□□□□ -0.7
TDRD3-209ENST00000621840 GCC2Q8IWJ2 1684 aa10.7□□□□□ -0.7
TDRD3-209ENST00000621840 NBR1Q14596 966 aa10.69□□□□□ -0.7
TDRD3-209ENST00000621840 B4GALNT3Q6L9W6 998 aa10.69□□□□□ -0.7
TDRD3-209ENST00000621840 PAK3O75914 559 aaPredicted RBP10.69□□□□□ -0.7
TDRD3-209ENST00000621840 CFTRP13569 1480 aa10.69□□□□□ -0.7
TDRD3-209ENST00000621840 IGF1RP08069 1367 aa10.69□□□□□ -0.7
TDRD3-209ENST00000621840 NCOA1Q15788 1441 aa10.68□□□□□ -0.7
TDRD3-209ENST00000621840 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
TDRD3-209ENST00000621840 USP35Q9P2H5 1018 aa10.68□□□□□ -0.7
TDRD3-209ENST00000621840 RNF123Q5XPI4 1314 aa10.68□□□□□ -0.7
TDRD3-209ENST00000621840 FMN1Q68DA7 1419 aa10.68□□□□□ -0.7
TDRD3-209ENST00000621840 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
TDRD3-209ENST00000621840 ANO8Q9HCE9 1232 aaPredicted RBP10.67□□□□□ -0.7
TDRD3-209ENST00000621840 CARMIL1Q5VZK9 1371 aa10.67□□□□□ -0.7
TDRD3-209ENST00000621840 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
TDRD3-209ENST00000621840 NAIPQ13075 1403 aa10.66□□□□□ -0.7
TDRD3-209ENST00000621840 AKNAQ7Z591 1439 aa10.66□□□□□ -0.7
TDRD3-209ENST00000621840 C11orf95C9JLR9 678 aaPredicted RBP10.65□□□□□ -0.7
TDRD3-209ENST00000621840 HSPA5P11021 654 aaKnown RBP10.65□□□□□ -0.7
TDRD3-209ENST00000621840 EIF4G2P78344 907 aaKnown RBP eCLIP10.65□□□□□ -0.7
TDRD3-209ENST00000621840 PRKRIP1Q9H875 184 aaPredicted RBP10.65□□□□□ -0.7
TDRD3-209ENST00000621840 CCDC7Q96M83 1385 aa10.65□□□□□ -0.7
TDRD3-209ENST00000621840 CTTNBP2Q8WZ74 1663 aa10.64□□□□□ -0.71
TDRD3-209ENST00000621840 PABPN1Q86U42 306 aaKnown RBP eCLIP10.63□□□□□ -0.71
TDRD3-209ENST00000621840 SUPT6HQ7KZ85 1726 aaKnown RBP10.63□□□□□ -0.71
TDRD3-209ENST00000621840 MRS2Q9HD23 443 aa10.62□□□□□ -0.71
TDRD3-209ENST00000621840 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
TDRD3-209ENST00000621840 EHBP1L1Q8N3D4 1523 aa10.62□□□□□ -0.71
TDRD3-209ENST00000621840 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 NUDCQ9Y266 331 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 KIF21AQ7Z4S6 1674 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 MYOM3Q5VTT5 1437 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 WASHC2CQ9Y4E1 1318 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 CUL7Q14999 1698 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 CCDC136Q96JN2 1154 aa10.61□□□□□ -0.71
TDRD3-209ENST00000621840 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
TDRD3-209ENST00000621840 PPM1GO15355 546 aaPredicted RBP10.6□□□□□ -0.71
TDRD3-209ENST00000621840 FHOD3Q2V2M9 1422 aa10.59□□□□□ -0.71
TDRD3-209ENST00000621840 UBE2Q2Q8WVN8 375 aa10.59□□□□□ -0.71
TDRD3-209ENST00000621840 TCOF1Q13428 1488 aaKnown RBP10.58□□□□□ -0.71
TDRD3-209ENST00000621840 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
TDRD3-209ENST00000621840 TCERG1O14776 1098 aaKnown RBP10.58□□□□□ -0.72
TDRD3-209ENST00000621840 CCDC184Q52MB2 194 aa10.58□□□□□ -0.72
TDRD3-209ENST00000621840 ARHGEF11O15085 1522 aa10.57□□□□□ -0.72
TDRD3-209ENST00000621840 MTUS2Q5JR59 1369 aa10.57□□□□□ -0.72
TDRD3-209ENST00000621840 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
TDRD3-209ENST00000621840 UGGT2Q9NYU1 1516 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms