RNA–Protein interactions for RNA: ENST00000621840.4

TDRD3-209, Transcript of tudor domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene TDRD3, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDRD3-209ENST00000621840 NISCHQ9Y2I1 1504 aa15.02■□□□□ -0
TDRD3-209ENST00000621840 HRCP23327 699 aa13.28□□□□□ -0.28
TDRD3-209ENST00000621840 PELP1Q8IZL8 1130 aaKnown RBP13.04□□□□□ -0.32
TDRD3-209ENST00000621840 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
TDRD3-209ENST00000621840 SHROOM4Q9ULL8 1493 aa12.91□□□□□ -0.34
TDRD3-209ENST00000621840 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
TDRD3-209ENST00000621840 SUPT5HO00267 1087 aaKnown RBP12.86□□□□□ -0.35
TDRD3-209ENST00000621840 ZCCHC6Q5VYS8 1495 aaKnown RBP12.84□□□□□ -0.35
TDRD3-209ENST00000621840 CHIC1Q5VXU3 224 aa12.83□□□□□ -0.36
TDRD3-209ENST00000621840 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
TDRD3-209ENST00000621840 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
TDRD3-209ENST00000621840 PPARGC1BQ86YN6 1023 aaKnown RBP12.74□□□□□ -0.37
TDRD3-209ENST00000621840 ZEB1P37275 1124 aaPredicted RBP12.64□□□□□ -0.39
TDRD3-209ENST00000621840 MYT1Q01538 1121 aa12.62□□□□□ -0.39
TDRD3-209ENST00000621840 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
TDRD3-209ENST00000621840 SCAF1Q9H7N4 1312 aaKnown RBP12.46□□□□□ -0.42
TDRD3-209ENST00000621840 LOC105371045A0A1W2PR82 267 aa12.34□□□□□ -0.43
TDRD3-209ENST00000621840 ABCC9O60706 1549 aa12.24□□□□□ -0.45
TDRD3-209ENST00000621840 ACIN1Q9UKV3 1341 aaKnown RBP12.24□□□□□ -0.45
TDRD3-209ENST00000621840 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
TDRD3-209ENST00000621840 NEUROD1Q13562 356 aa12.1□□□□□ -0.47
TDRD3-209ENST00000621840 RB1CC1Q8TDY2 1594 aa12.06□□□□□ -0.48
TDRD3-209ENST00000621840 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
TDRD3-209ENST00000621840 TRIM41Q8WV44 630 aa12.02□□□□□ -0.48
TDRD3-209ENST00000621840 DCAF8L2P0C7V8 631 aa12.02□□□□□ -0.49
TDRD3-209ENST00000621840 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
TDRD3-209ENST00000621840 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
TDRD3-209ENST00000621840 CCER1Q8TC90 406 aaPredicted RBP11.94□□□□□ -0.5
TDRD3-209ENST00000621840 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
TDRD3-209ENST00000621840 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
TDRD3-209ENST00000621840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.87□□□□□ -0.51
TDRD3-209ENST00000621840 FAM9AQ8IZU1 332 aaPredicted RBP11.83□□□□□ -0.52
TDRD3-209ENST00000621840 CLSPNQ9HAW4 1339 aa11.83□□□□□ -0.52
TDRD3-209ENST00000621840 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
TDRD3-209ENST00000621840 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
TDRD3-209ENST00000621840 EIF4G1Q04637 1599 aaKnown RBP11.79□□□□□ -0.52
TDRD3-209ENST00000621840 BAZ1AQ9NRL2 1556 aaPredicted RBP11.71□□□□□ -0.53
TDRD3-209ENST00000621840 CEP162Q5TB80 1403 aa11.68□□□□□ -0.54
TDRD3-209ENST00000621840 EEA1Q15075 1411 aa11.66□□□□□ -0.54
TDRD3-209ENST00000621840 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
TDRD3-209ENST00000621840 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
TDRD3-209ENST00000621840 YTHDC1Q96MU7 727 aaKnown RBP11.63□□□□□ -0.55
TDRD3-209ENST00000621840 WIZO95785 1651 aa11.62□□□□□ -0.55
TDRD3-209ENST00000621840 EHMT2Q96KQ7 1210 aa11.62□□□□□ -0.55
TDRD3-209ENST00000621840 MIER1Q8N108 512 aa11.62□□□□□ -0.55
TDRD3-209ENST00000621840 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
TDRD3-209ENST00000621840 NACADO15069 1562 aa11.58□□□□□ -0.56
TDRD3-209ENST00000621840 ANP32EQ9BTT0 268 aa11.57□□□□□ -0.56
TDRD3-209ENST00000621840 GOLGA3Q08378 1498 aa11.54□□□□□ -0.56
TDRD3-209ENST00000621840 TOP2AP11388 1531 aaKnown RBP11.54□□□□□ -0.56
TDRD3-209ENST00000621840 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
TDRD3-209ENST00000621840 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
TDRD3-209ENST00000621840 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
TDRD3-209ENST00000621840 ABCC8Q09428 1581 aa11.49□□□□□ -0.57
TDRD3-209ENST00000621840 KIF21BO75037 1637 aa11.48□□□□□ -0.57
TDRD3-209ENST00000621840 TSHZ2Q9NRE2 1034 aa11.48□□□□□ -0.57
TDRD3-209ENST00000621840 SMARCA2P51531 1590 aa11.45□□□□□ -0.58
TDRD3-209ENST00000621840 SOGA1O94964 1423 aa11.44□□□□□ -0.58
TDRD3-209ENST00000621840 CSRNP3Q8WYN3 585 aa11.43□□□□□ -0.58
TDRD3-209ENST00000621840 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
TDRD3-209ENST00000621840 VPS8Q8N3P4 1428 aa11.42□□□□□ -0.58
TDRD3-209ENST00000621840 BAZ1BQ9UIG0 1483 aaKnown RBP11.41□□□□□ -0.58
TDRD3-209ENST00000621840 SMARCA4P51532 1647 aa11.38□□□□□ -0.59
TDRD3-209ENST00000621840 CLIP1P30622 1438 aa11.37□□□□□ -0.59
TDRD3-209ENST00000621840 UBTFP17480 764 aaKnown RBP11.37□□□□□ -0.59
TDRD3-209ENST00000621840 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
TDRD3-209ENST00000621840 DHX57Q6P158 1386 aaKnown RBP11.34□□□□□ -0.59
TDRD3-209ENST00000621840 RUSC2Q8N2Y8 1516 aa11.33□□□□□ -0.6
TDRD3-209ENST00000621840 CUX2O14529 1486 aa11.32□□□□□ -0.6
TDRD3-209ENST00000621840 APLP2Q06481 763 aa11.29□□□□□ -0.6
TDRD3-209ENST00000621840 RRBP1Q9P2E9 1410 aaKnown RBP11.23□□□□□ -0.61
TDRD3-209ENST00000621840 SYNJ1O43426 1573 aa11.23□□□□□ -0.61
TDRD3-209ENST00000621840 ERICH3Q5RHP9 1530 aa11.22□□□□□ -0.61
TDRD3-209ENST00000621840 NEFLP07196 543 aa11.21□□□□□ -0.61
TDRD3-209ENST00000621840 MYT1LQ9UL68 1186 aa11.21□□□□□ -0.61
TDRD3-209ENST00000621840 RBM19Q9Y4C8 960 aaKnown RBP11.19□□□□□ -0.62
TDRD3-209ENST00000621840 PEG3Q9GZU2 1588 aa11.19□□□□□ -0.62
TDRD3-209ENST00000621840 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
TDRD3-209ENST00000621840 FKBP8Q14318 412 aa11.17□□□□□ -0.62
TDRD3-209ENST00000621840 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
TDRD3-209ENST00000621840 ARAP1Q96P48 1450 aa11.15□□□□□ -0.62
TDRD3-209ENST00000621840 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
TDRD3-209ENST00000621840 MAPKBP1O60336 1514 aa11.12□□□□□ -0.63
TDRD3-209ENST00000621840 BCANQ96GW7 911 aa11.12□□□□□ -0.63
TDRD3-209ENST00000621840 TOP2BQ02880 1626 aa11.11□□□□□ -0.63
TDRD3-209ENST00000621840 BIVM-ERCC5R4GMW8 1640 aa11.11□□□□□ -0.63
TDRD3-209ENST00000621840 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
TDRD3-209ENST00000621840 UNC13AQ9UPW8 1703 aa11.1□□□□□ -0.63
TDRD3-209ENST00000621840 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
TDRD3-209ENST00000621840 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
TDRD3-209ENST00000621840 MAP3K1Q13233 1512 aa11.07□□□□□ -0.64
TDRD3-209ENST00000621840 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
TDRD3-209ENST00000621840 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
TDRD3-209ENST00000621840 MSH5O43196 834 aa11.05□□□□□ -0.64
TDRD3-209ENST00000621840 ERICH6BQ5W0A0 696 aa11.05□□□□□ -0.64
TDRD3-209ENST00000621840 WDR97A6NE52 1622 aa11.05□□□□□ -0.64
TDRD3-209ENST00000621840 PPP1R15AO75807 674 aaPredicted RBP11.04□□□□□ -0.64
TDRD3-209ENST00000621840 RAB3GAP2Q9H2M9 1393 aa11.03□□□□□ -0.64
TDRD3-209ENST00000621840 CDK11AQ9UQ88 783 aaPredicted RBP11.02□□□□□ -0.65
TDRD3-209ENST00000621840 SETD5Q9C0A6 1442 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 259.1 ms