RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 PRG4Q92954 1404 aaPredicted RBP30.81■■■□□ 2.52
SCAMP4-213ENST00000621748 CARMIL1Q5VZK9 1371 aa30.8■■■□□ 2.52
SCAMP4-213ENST00000621748 TRHP20396 242 aaPredicted RBP30.79■■■□□ 2.52
SCAMP4-213ENST00000621748 KIAA0586Q9BVV6 1533 aa30.73■■■□□ 2.51
SCAMP4-213ENST00000621748 RAPGEF2Q9Y4G8 1499 aa30.56■■■□□ 2.48
SCAMP4-213ENST00000621748 IQGAP2Q13576 1575 aa30.49■■■□□ 2.47
SCAMP4-213ENST00000621748 CARMIL2Q6F5E8 1435 aa30.39■■■□□ 2.46
SCAMP4-213ENST00000621748 ADCY10Q96PN6 1610 aa30.39■■■□□ 2.46
SCAMP4-213ENST00000621748 PTPRGP23470 1445 aa30.38■■■□□ 2.45
SCAMP4-213ENST00000621748 PRXQ9BXM0 1461 aa30.37■■■□□ 2.45
SCAMP4-213ENST00000621748 TTBK1Q5TCY1 1321 aaPredicted RBP30.35■■■□□ 2.45
SCAMP4-213ENST00000621748 TNIKQ9UKE5 1360 aa30.35■■■□□ 2.45
SCAMP4-213ENST00000621748 DISP1Q96F81 1524 aa30.34■■■□□ 2.45
SCAMP4-213ENST00000621748 NPM1P06748 294 aaKnown RBP eCLIP30.33■■■□□ 2.45
SCAMP4-213ENST00000621748 UGGT2Q9NYU1 1516 aa30.32■■■□□ 2.44
SCAMP4-213ENST00000621748 CTTNBP2Q8WZ74 1663 aa30.27■■■□□ 2.44
SCAMP4-213ENST00000621748 KIF13AQ9H1H9 1805 aa30.26■■■□□ 2.44
SCAMP4-213ENST00000621748 CSRNP3Q8WYN3 585 aa30.26■■■□□ 2.43
SCAMP4-213ENST00000621748 MAPKBP1O60336 1514 aa30.24■■■□□ 2.43
SCAMP4-213ENST00000621748 KIAA0556O60303 1618 aa30.21■■■□□ 2.43
SCAMP4-213ENST00000621748 ABCC10Q5T3U5 1492 aa30.18■■■□□ 2.42
SCAMP4-213ENST00000621748 FAM69CQ0P6D2 419 aa30.16■■■□□ 2.42
SCAMP4-213ENST00000621748 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
SCAMP4-213ENST00000621748 EEA1Q15075 1411 aa30.14■■■□□ 2.42
SCAMP4-213ENST00000621748 ABCC2Q92887 1545 aa30.14■■■□□ 2.42
SCAMP4-213ENST00000621748 UHRF1BP1LA0JNW5 1464 aa30.13■■■□□ 2.41
SCAMP4-213ENST00000621748 DIP2BQ9P265 1576 aa30.11■■■□□ 2.41
SCAMP4-213ENST00000621748 CHIC1Q5VXU3 224 aa30.1■■■□□ 2.41
SCAMP4-213ENST00000621748 FAM9AQ8IZU1 332 aaPredicted RBP30.1■■■□□ 2.41
SCAMP4-213ENST00000621748 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
SCAMP4-213ENST00000621748 ASXL2Q76L83 1435 aa30.01■■■□□ 2.39
SCAMP4-213ENST00000621748 KDM5BQ9UGL1 1544 aa30.01■■■□□ 2.39
SCAMP4-213ENST00000621748 PLB1Q6P1J6 1458 aa29.99■■■□□ 2.39
SCAMP4-213ENST00000621748 P3H3Q8IVL6 736 aa29.95■■■□□ 2.39
SCAMP4-213ENST00000621748 ZCCHC11Q5TAX3 1644 aaKnown RBP29.94■■■□□ 2.38
SCAMP4-213ENST00000621748 TSPOAP1O95153 1857 aa29.93■■■□□ 2.38
SCAMP4-213ENST00000621748 ABCA8O94911 1581 aa29.91■■■□□ 2.38
SCAMP4-213ENST00000621748 KIF21BO75037 1637 aa29.89■■■□□ 2.37
SCAMP4-213ENST00000621748 SAMD9Q5K651 1589 aa29.87■■■□□ 2.37
SCAMP4-213ENST00000621748 GLI2P10070 1586 aa29.86■■■□□ 2.37
SCAMP4-213ENST00000621748 RANGAP1P46060 587 aaPredicted RBP29.84■■■□□ 2.37
SCAMP4-213ENST00000621748 EPRSP07814 1512 aaKnown RBP29.82■■■□□ 2.36
SCAMP4-213ENST00000621748 WDR7Q9Y4E6 1490 aa29.77■■■□□ 2.36
SCAMP4-213ENST00000621748 EHMT2Q96KQ7 1210 aa29.77■■■□□ 2.36
SCAMP4-213ENST00000621748 PPRC1Q5VV67 1664 aaKnown RBP29.76■■■□□ 2.36
SCAMP4-213ENST00000621748 ARID3CA6NKF2 412 aa29.73■■■□□ 2.35
SCAMP4-213ENST00000621748 KDM6BO15054 1643 aa29.72■■■□□ 2.35
SCAMP4-213ENST00000621748 MAP3K4Q9Y6R4 1608 aa29.71■■■□□ 2.35
SCAMP4-213ENST00000621748 FHOD3Q2V2M9 1422 aa29.71■■■□□ 2.35
SCAMP4-213ENST00000621748 ATP10BO94823 1461 aa29.69■■■□□ 2.34
SCAMP4-213ENST00000621748 UBTFP17480 764 aaKnown RBP29.69■■■□□ 2.34
SCAMP4-213ENST00000621748 KCNH8Q96L42 1107 aa29.68■■■□□ 2.34
SCAMP4-213ENST00000621748 RAPGEF6Q8TEU7 1601 aa29.67■■■□□ 2.34
SCAMP4-213ENST00000621748 EFCAB5A4FU69 1503 aa29.63■■■□□ 2.33
SCAMP4-213ENST00000621748 NUP153P49790 1475 aaKnown RBP29.58■■■□□ 2.33
SCAMP4-213ENST00000621748 TEX14Q8IWB6 1497 aa29.57■■■□□ 2.32
SCAMP4-213ENST00000621748 CD109Q6YHK3 1445 aa29.56■■■□□ 2.32
SCAMP4-213ENST00000621748 COL17A1Q9UMD9 1497 aaPredicted RBP29.55■■■□□ 2.32
SCAMP4-213ENST00000621748 CFAP43Q8NDM7 1665 aa29.55■■■□□ 2.32
SCAMP4-213ENST00000621748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
SCAMP4-213ENST00000621748 HNRNPUL2Q1KMD3 747 aaKnown RBP29.53■■■□□ 2.32
SCAMP4-213ENST00000621748 AEBP2Q6ZN18 517 aaPredicted RBP29.51■■■□□ 2.31
SCAMP4-213ENST00000621748 MAGI3Q5TCQ9 1506 aa29.5■■■□□ 2.31
SCAMP4-213ENST00000621748 ARHGAP35Q9NRY4 1499 aa29.48■■■□□ 2.31
SCAMP4-213ENST00000621748 ABCA9Q8IUA7 1624 aa29.42■■■□□ 2.3
SCAMP4-213ENST00000621748 PLEKHD1A6NEE1 506 aa29.39■■■□□ 2.3
SCAMP4-213ENST00000621748 FMN1Q68DA7 1419 aa29.37■■■□□ 2.29
SCAMP4-213ENST00000621748 CDK13Q14004 1512 aaKnown RBP29.34■■■□□ 2.29
SCAMP4-213ENST00000621748 ATP1B4Q9UN42 357 aaPredicted RBP29.33■■■□□ 2.29
SCAMP4-213ENST00000621748 KDM4FA0A1W2PPD8 638 aa29.31■■■□□ 2.28
SCAMP4-213ENST00000621748 HECW1Q76N89 1606 aa29.27■■■□□ 2.28
SCAMP4-213ENST00000621748 ARAP3Q8WWN8 1544 aa29.26■■■□□ 2.27
SCAMP4-213ENST00000621748 PHLDB1Q86UU1 1377 aa29.24■■■□□ 2.27
SCAMP4-213ENST00000621748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.23■■■□□ 2.27
SCAMP4-213ENST00000621748 NEO1Q92859 1461 aa29.21■■■□□ 2.27
SCAMP4-213ENST00000621748 TTC37Q6PGP7 1564 aa29.18■■■□□ 2.26
SCAMP4-213ENST00000621748 LRRIQ1Q96JM4 1722 aa29.17■■■□□ 2.26
SCAMP4-213ENST00000621748 RAPGEF3O95398 923 aa29.16■■■□□ 2.26
SCAMP4-213ENST00000621748 CLIP1P30622 1438 aa29.16■■■□□ 2.26
SCAMP4-213ENST00000621748 CDK11AQ9UQ88 783 aaPredicted RBP29.15■■■□□ 2.26
SCAMP4-213ENST00000621748 ADGRL1O94910 1474 aa29.13■■■□□ 2.25
SCAMP4-213ENST00000621748 CASKIN1Q8WXD9 1431 aa29.12■■■□□ 2.25
SCAMP4-213ENST00000621748 PCF11O94913 1555 aaKnown RBP29.12■■■□□ 2.25
SCAMP4-213ENST00000621748 FANCAO15360 1455 aa29.1■■■□□ 2.25
SCAMP4-213ENST00000621748 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
SCAMP4-213ENST00000621748 TROQ12816 1431 aaPredicted RBP29.07■■■□□ 2.24
SCAMP4-213ENST00000621748 FRMPD1Q5SYB0 1578 aa29.06■■■□□ 2.24
SCAMP4-213ENST00000621748 KIF14Q15058 1648 aa29.05■■■□□ 2.24
SCAMP4-213ENST00000621748 PLCH2O75038 1416 aa29.05■■■□□ 2.24
SCAMP4-213ENST00000621748 CFAP74Q9C0B2 1584 aa29.04■■■□□ 2.24
SCAMP4-213ENST00000621748 DENND4BO75064 1496 aaPredicted RBP29.02■■■□□ 2.24
SCAMP4-213ENST00000621748 CCDC18Q5T9S5 1454 aa29.02■■■□□ 2.24
SCAMP4-213ENST00000621748 FYCO1Q9BQS8 1478 aa29.01■■■□□ 2.23
SCAMP4-213ENST00000621748 RICTORQ6R327 1708 aa29■■■□□ 2.23
SCAMP4-213ENST00000621748 MYO5CQ9NQX4 1742 aa28.99■■■□□ 2.23
SCAMP4-213ENST00000621748 EFCAB2Q5VUJ9 269 aa28.94■■■□□ 2.22
SCAMP4-213ENST00000621748 CEP162Q5TB80 1403 aa28.94■■■□□ 2.22
SCAMP4-213ENST00000621748 SCAPERQ9BY12 1400 aa28.93■■■□□ 2.22
SCAMP4-213ENST00000621748 LOC105371045A0A1W2PR82 267 aa28.92■■■□□ 2.22
SCAMP4-213ENST00000621748 ARHGAP5Q13017 1502 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms