RNA–Protein interactions for RNA: ENST00000621069.1

KRBA1-209, Transcript of KRAB-A domain containing 1, humanhuman

TSL 1 (best)

Gene KRBA1, Length 3,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBA1-209ENST00000621069 TRIM26Q12899 539 aaPredicted RBP19.17■□□□□ 0.66
KRBA1-209ENST00000621069 THOC2Q8NI27 1593 aaKnown RBP19.17■□□□□ 0.66
KRBA1-209ENST00000621069 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
KRBA1-209ENST00000621069 TARBP1Q13395 1621 aaKnown RBP19.13■□□□□ 0.65
KRBA1-209ENST00000621069 FAM50AQ14320 339 aaKnown RBP19.11■□□□□ 0.65
KRBA1-209ENST00000621069 EIF4G3O43432 1585 aaKnown RBP19.11■□□□□ 0.65
KRBA1-209ENST00000621069 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
KRBA1-209ENST00000621069 KIF21BO75037 1637 aa19.09■□□□□ 0.65
KRBA1-209ENST00000621069 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
KRBA1-209ENST00000621069 KCNH8Q96L42 1107 aa19.04■□□□□ 0.64
KRBA1-209ENST00000621069 ARHGAP35Q9NRY4 1499 aa19.03■□□□□ 0.64
KRBA1-209ENST00000621069 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
KRBA1-209ENST00000621069 ABCA5Q8WWZ7 1642 aa19■□□□□ 0.63
KRBA1-209ENST00000621069 VPS8Q8N3P4 1428 aa19■□□□□ 0.63
KRBA1-209ENST00000621069 ERICH3Q5RHP9 1530 aa18.99■□□□□ 0.63
KRBA1-209ENST00000621069 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
KRBA1-209ENST00000621069 OSCARQ8IYS5 282 aa18.98■□□□□ 0.63
KRBA1-209ENST00000621069 PBRM1Q86U86 1689 aa18.95■□□□□ 0.62
KRBA1-209ENST00000621069 CYB5RLQ6IPT4 315 aa18.94■□□□□ 0.62
KRBA1-209ENST00000621069 SYNJ2O15056 1496 aa18.94■□□□□ 0.62
KRBA1-209ENST00000621069 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
KRBA1-209ENST00000621069 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
KRBA1-209ENST00000621069 CHIC2Q9UKJ5 165 aa18.9■□□□□ 0.62
KRBA1-209ENST00000621069 WDR97A6NE52 1622 aa18.89■□□□□ 0.62
KRBA1-209ENST00000621069 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
KRBA1-209ENST00000621069 ADAMTS12P58397 1594 aa18.89■□□□□ 0.61
KRBA1-209ENST00000621069 CUL7Q14999 1698 aa18.88■□□□□ 0.61
KRBA1-209ENST00000621069 MAGI1Q96QZ7 1491 aaPredicted RBP18.88■□□□□ 0.61
KRBA1-209ENST00000621069 MYT1LQ9UL68 1186 aa18.85■□□□□ 0.61
KRBA1-209ENST00000621069 IQGAP2Q13576 1575 aa18.81■□□□□ 0.6
KRBA1-209ENST00000621069 CARMIL2Q6F5E8 1435 aa18.81■□□□□ 0.6
KRBA1-209ENST00000621069 PTPRGP23470 1445 aa18.81■□□□□ 0.6
KRBA1-209ENST00000621069 KIAA0586Q9BVV6 1533 aa18.8■□□□□ 0.6
KRBA1-209ENST00000621069 PLB1Q6P1J6 1458 aa18.79■□□□□ 0.6
KRBA1-209ENST00000621069 CEP170Q5SW79 1584 aa18.78■□□□□ 0.6
KRBA1-209ENST00000621069 PLEKHD1A6NEE1 506 aa18.78■□□□□ 0.6
KRBA1-209ENST00000621069 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
KRBA1-209ENST00000621069 CDK11AQ9UQ88 783 aaPredicted RBP18.75■□□□□ 0.59
KRBA1-209ENST00000621069 SCAF1Q9H7N4 1312 aaKnown RBP18.75■□□□□ 0.59
KRBA1-209ENST00000621069 NPM1P06748 294 aaKnown RBP eCLIP18.74■□□□□ 0.59
KRBA1-209ENST00000621069 CDK13Q14004 1512 aaKnown RBP18.73■□□□□ 0.59
KRBA1-209ENST00000621069 CHD1O14646 1710 aa18.72■□□□□ 0.59
KRBA1-209ENST00000621069 RRP7BPQ9NSQ0 103 aa18.71■□□□□ 0.59
KRBA1-209ENST00000621069 CTTNBP2Q8WZ74 1663 aa18.7■□□□□ 0.58
KRBA1-209ENST00000621069 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
KRBA1-209ENST00000621069 ZNF644Q9H582 1327 aaPredicted RBP18.7■□□□□ 0.58
KRBA1-209ENST00000621069 ERCC6L2Q5T890 1561 aa18.69■□□□□ 0.58
KRBA1-209ENST00000621069 DISP1Q96F81 1524 aa18.65■□□□□ 0.58
KRBA1-209ENST00000621069 NUP160Q12769 1436 aa18.65■□□□□ 0.58
KRBA1-209ENST00000621069 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
KRBA1-209ENST00000621069 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
KRBA1-209ENST00000621069 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
KRBA1-209ENST00000621069 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
KRBA1-209ENST00000621069 CASKIN1Q8WXD9 1431 aa18.61■□□□□ 0.57
KRBA1-209ENST00000621069 EFCAB5A4FU69 1503 aa18.57■□□□□ 0.56
KRBA1-209ENST00000621069 LRRC9Q6ZRR7 1453 aa18.57■□□□□ 0.56
KRBA1-209ENST00000621069 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
KRBA1-209ENST00000621069 HNRNPMP52272 730 aaKnown RBP eCLIP18.56■□□□□ 0.56
KRBA1-209ENST00000621069 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
KRBA1-209ENST00000621069 KIAA0556O60303 1618 aa18.54■□□□□ 0.56
KRBA1-209ENST00000621069 EPRSP07814 1512 aaKnown RBP18.53■□□□□ 0.56
KRBA1-209ENST00000621069 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
KRBA1-209ENST00000621069 UGGT2Q9NYU1 1516 aa18.51■□□□□ 0.55
KRBA1-209ENST00000621069 FYCO1Q9BQS8 1478 aa18.51■□□□□ 0.55
KRBA1-209ENST00000621069 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
KRBA1-209ENST00000621069 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
KRBA1-209ENST00000621069 NUP153P49790 1475 aaKnown RBP18.5■□□□□ 0.55
KRBA1-209ENST00000621069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
KRBA1-209ENST00000621069 UACAQ9BZF9 1416 aa18.48■□□□□ 0.55
KRBA1-209ENST00000621069 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
KRBA1-209ENST00000621069 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
KRBA1-209ENST00000621069 SAMD9Q5K651 1589 aa18.46■□□□□ 0.55
KRBA1-209ENST00000621069 FOXD1Q16676 465 aa18.43■□□□□ 0.54
KRBA1-209ENST00000621069 ATP10BO94823 1461 aa18.43■□□□□ 0.54
KRBA1-209ENST00000621069 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
KRBA1-209ENST00000621069 MAGI3Q5TCQ9 1506 aa18.41■□□□□ 0.54
KRBA1-209ENST00000621069 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
KRBA1-209ENST00000621069 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
KRBA1-209ENST00000621069 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
KRBA1-209ENST00000621069 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
KRBA1-209ENST00000621069 CCDC18Q5T9S5 1454 aa18.4■□□□□ 0.54
KRBA1-209ENST00000621069 HECW1Q76N89 1606 aa18.38■□□□□ 0.53
KRBA1-209ENST00000621069 RAPGEF6Q8TEU7 1601 aa18.38■□□□□ 0.53
KRBA1-209ENST00000621069 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
KRBA1-209ENST00000621069 FGD6Q6ZV73 1430 aa18.36■□□□□ 0.53
KRBA1-209ENST00000621069 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
KRBA1-209ENST00000621069 TROQ12816 1431 aaPredicted RBP18.33■□□□□ 0.52
KRBA1-209ENST00000621069 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
KRBA1-209ENST00000621069 RAB3GAP2Q9H2M9 1393 aa18.31■□□□□ 0.52
KRBA1-209ENST00000621069 RAPGEF3O95398 923 aa18.29■□□□□ 0.52
KRBA1-209ENST00000621069 EFCAB2Q5VUJ9 269 aa18.29■□□□□ 0.52
KRBA1-209ENST00000621069 ZNF326Q5BKZ1 582 aaKnown RBP18.28■□□□□ 0.52
KRBA1-209ENST00000621069 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
KRBA1-209ENST00000621069 GTF3C3Q9Y5Q9 886 aa18.28■□□□□ 0.52
KRBA1-209ENST00000621069 MLECQ14165 292 aa18.27■□□□□ 0.52
KRBA1-209ENST00000621069 CLASP1Q7Z460 1538 aa18.27■□□□□ 0.52
KRBA1-209ENST00000621069 KIF14Q15058 1648 aa18.25■□□□□ 0.51
KRBA1-209ENST00000621069 ACIN1Q9UKV3 1341 aaKnown RBP18.25■□□□□ 0.51
KRBA1-209ENST00000621069 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
KRBA1-209ENST00000621069 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms