RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 SHROOM2Q13796 1616 aa25.59■■□□□ 1.69
C2orf48-202ENST00000619640 RIMBP3Q9UFD9 1639 aa25.59■■□□□ 1.69
C2orf48-202ENST00000619640 KIAA0586Q9BVV6 1533 aa25.58■■□□□ 1.68
C2orf48-202ENST00000619640 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
C2orf48-202ENST00000619640 KIF21BO75037 1637 aa25.45■■□□□ 1.67
C2orf48-202ENST00000619640 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.66
C2orf48-202ENST00000619640 IQGAP2Q13576 1575 aa25.44■■□□□ 1.66
C2orf48-202ENST00000619640 ERCC6L2Q5T890 1561 aa25.44■■□□□ 1.66
C2orf48-202ENST00000619640 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
C2orf48-202ENST00000619640 CTTNBP2Q8WZ74 1663 aa25.41■■□□□ 1.66
C2orf48-202ENST00000619640 PRG4Q92954 1404 aaPredicted RBP25.4■■□□□ 1.66
C2orf48-202ENST00000619640 UGGT2Q9NYU1 1516 aa25.36■■□□□ 1.65
C2orf48-202ENST00000619640 DISP1Q96F81 1524 aa25.28■■□□□ 1.64
C2orf48-202ENST00000619640 CYB5RLQ6IPT4 315 aa25.28■■□□□ 1.64
C2orf48-202ENST00000619640 GOLGA3Q08378 1498 aa25.27■■□□□ 1.64
C2orf48-202ENST00000619640 CARMIL2Q6F5E8 1435 aa25.24■■□□□ 1.63
C2orf48-202ENST00000619640 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
C2orf48-202ENST00000619640 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
C2orf48-202ENST00000619640 SAMD9Q5K651 1589 aa25.14■■□□□ 1.62
C2orf48-202ENST00000619640 PTPRGP23470 1445 aa25.12■■□□□ 1.61
C2orf48-202ENST00000619640 UBTFP17480 764 aaKnown RBP25.08■■□□□ 1.61
C2orf48-202ENST00000619640 EFCAB5A4FU69 1503 aa25.04■■□□□ 1.6
C2orf48-202ENST00000619640 EHMT2Q96KQ7 1210 aa25.03■■□□□ 1.6
C2orf48-202ENST00000619640 ADCY10Q96PN6 1610 aa25.03■■□□□ 1.6
C2orf48-202ENST00000619640 UHRF1BP1LA0JNW5 1464 aa25.01■■□□□ 1.59
C2orf48-202ENST00000619640 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
C2orf48-202ENST00000619640 ABCC2Q92887 1545 aa24.96■■□□□ 1.59
C2orf48-202ENST00000619640 ABCA8O94911 1581 aa24.94■■□□□ 1.58
C2orf48-202ENST00000619640 ARHGAP35Q9NRY4 1499 aa24.94■■□□□ 1.58
C2orf48-202ENST00000619640 TTBK1Q5TCY1 1321 aaPredicted RBP24.92■■□□□ 1.58
C2orf48-202ENST00000619640 PLB1Q6P1J6 1458 aa24.92■■□□□ 1.58
C2orf48-202ENST00000619640 P3H3Q8IVL6 736 aa24.92■■□□□ 1.58
C2orf48-202ENST00000619640 FHOD3Q2V2M9 1422 aa24.92■■□□□ 1.58
C2orf48-202ENST00000619640 RANGAP1P46060 587 aaPredicted RBP24.89■■□□□ 1.58
C2orf48-202ENST00000619640 KDM5BQ9UGL1 1544 aa24.87■■□□□ 1.57
C2orf48-202ENST00000619640 MAPKBP1O60336 1514 aa24.86■■□□□ 1.57
C2orf48-202ENST00000619640 NPM1P06748 294 aaKnown RBP eCLIP24.81■■□□□ 1.56
C2orf48-202ENST00000619640 RAPGEF6Q8TEU7 1601 aa24.81■■□□□ 1.56
C2orf48-202ENST00000619640 CLIP1P30622 1438 aa24.8■■□□□ 1.56
C2orf48-202ENST00000619640 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
C2orf48-202ENST00000619640 ZCCHC11Q5TAX3 1644 aaKnown RBP24.79■■□□□ 1.56
C2orf48-202ENST00000619640 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
C2orf48-202ENST00000619640 NUP153P49790 1475 aaKnown RBP24.75■■□□□ 1.55
C2orf48-202ENST00000619640 CEP162Q5TB80 1403 aa24.74■■□□□ 1.55
C2orf48-202ENST00000619640 ATP10BO94823 1461 aa24.71■■□□□ 1.55
C2orf48-202ENST00000619640 ASXL2Q76L83 1435 aa24.71■■□□□ 1.55
C2orf48-202ENST00000619640 ABCC10Q5T3U5 1492 aa24.7■■□□□ 1.55
C2orf48-202ENST00000619640 DIP2BQ9P265 1576 aa24.68■■□□□ 1.54
C2orf48-202ENST00000619640 KIF13AQ9H1H9 1805 aa24.67■■□□□ 1.54
C2orf48-202ENST00000619640 TRHP20396 242 aaPredicted RBP24.65■■□□□ 1.54
C2orf48-202ENST00000619640 HECW1Q76N89 1606 aa24.64■■□□□ 1.53
C2orf48-202ENST00000619640 WDR7Q9Y4E6 1490 aa24.64■■□□□ 1.53
C2orf48-202ENST00000619640 CASKIN1Q8WXD9 1431 aa24.62■■□□□ 1.53
C2orf48-202ENST00000619640 GLI2P10070 1586 aa24.61■■□□□ 1.53
C2orf48-202ENST00000619640 PCF11O94913 1555 aaKnown RBP24.6■■□□□ 1.53
C2orf48-202ENST00000619640 EPRSP07814 1512 aaKnown RBP24.59■■□□□ 1.53
C2orf48-202ENST00000619640 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
C2orf48-202ENST00000619640 ARID3CA6NKF2 412 aa24.56■■□□□ 1.52
C2orf48-202ENST00000619640 FAM69CQ0P6D2 419 aa24.55■■□□□ 1.52
C2orf48-202ENST00000619640 CDK13Q14004 1512 aaKnown RBP24.55■■□□□ 1.52
C2orf48-202ENST00000619640 LRRIQ1Q96JM4 1722 aa24.55■■□□□ 1.52
C2orf48-202ENST00000619640 CCDC18Q5T9S5 1454 aa24.5■■□□□ 1.51
C2orf48-202ENST00000619640 MAP3K4Q9Y6R4 1608 aa24.48■■□□□ 1.51
C2orf48-202ENST00000619640 VPS8Q8N3P4 1428 aa24.46■■□□□ 1.51
C2orf48-202ENST00000619640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.46■■□□□ 1.51
C2orf48-202ENST00000619640 HNRNPUL2Q1KMD3 747 aaKnown RBP24.46■■□□□ 1.51
C2orf48-202ENST00000619640 PLEKHD1A6NEE1 506 aa24.44■■□□□ 1.5
C2orf48-202ENST00000619640 ATP1B4Q9UN42 357 aaPredicted RBP24.44■■□□□ 1.5
C2orf48-202ENST00000619640 CFAP43Q8NDM7 1665 aa24.43■■□□□ 1.5
C2orf48-202ENST00000619640 PPRC1Q5VV67 1664 aaKnown RBP24.43■■□□□ 1.5
C2orf48-202ENST00000619640 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
C2orf48-202ENST00000619640 KCNH8Q96L42 1107 aa24.41■■□□□ 1.5
C2orf48-202ENST00000619640 CDK11AQ9UQ88 783 aaPredicted RBP24.39■■□□□ 1.49
C2orf48-202ENST00000619640 TROQ12816 1431 aaPredicted RBP24.38■■□□□ 1.49
C2orf48-202ENST00000619640 MAGI3Q5TCQ9 1506 aa24.36■■□□□ 1.49
C2orf48-202ENST00000619640 TSPOAP1O95153 1857 aa24.36■■□□□ 1.49
C2orf48-202ENST00000619640 CD109Q6YHK3 1445 aa24.35■■□□□ 1.49
C2orf48-202ENST00000619640 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.35■■□□□ 1.494e-9■■■■■ 53.2
C2orf48-202ENST00000619640 KIF14Q15058 1648 aa24.31■■□□□ 1.48
C2orf48-202ENST00000619640 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
C2orf48-202ENST00000619640 TTC37Q6PGP7 1564 aa24.3■■□□□ 1.48
C2orf48-202ENST00000619640 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
C2orf48-202ENST00000619640 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
C2orf48-202ENST00000619640 EHBP1L1Q8N3D4 1523 aa24.23■■□□□ 1.47
C2orf48-202ENST00000619640 ARAP3Q8WWN8 1544 aa24.21■■□□□ 1.47
C2orf48-202ENST00000619640 NEO1Q92859 1461 aa24.2■■□□□ 1.47
C2orf48-202ENST00000619640 PLCH2O75038 1416 aa24.2■■□□□ 1.46
C2orf48-202ENST00000619640 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
C2orf48-202ENST00000619640 MYO5CQ9NQX4 1742 aa24.18■■□□□ 1.46
C2orf48-202ENST00000619640 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
C2orf48-202ENST00000619640 KDM6BO15054 1643 aa24.18■■□□□ 1.46
C2orf48-202ENST00000619640 COL17A1Q9UMD9 1497 aaPredicted RBP24.17■■□□□ 1.46
C2orf48-202ENST00000619640 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
C2orf48-202ENST00000619640 CFAP74Q9C0B2 1584 aa24.14■■□□□ 1.45
C2orf48-202ENST00000619640 FANCAO15360 1455 aa24.13■■□□□ 1.45
C2orf48-202ENST00000619640 PREX2Q70Z35 1606 aa24.13■■□□□ 1.45
C2orf48-202ENST00000619640 CDC42BPAQ5VT25 1732 aa24.12■■□□□ 1.45
C2orf48-202ENST00000619640 CDC42BPBQ9Y5S2 1711 aa24.11■■□□□ 1.45
C2orf48-202ENST00000619640 GPATCH8Q9UKJ3 1502 aaKnown RBP24.1■■□□□ 1.45
C2orf48-202ENST00000619640 SUPT6HQ7KZ85 1726 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms