RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 CARMIL1Q5VZK9 1371 aa26.71■■□□□ 1.87
LINC00221-202ENST00000619530 PRG4Q92954 1404 aaPredicted RBP26.69■■□□□ 1.86
LINC00221-202ENST00000619530 RUSC2Q8N2Y8 1516 aa26.65■■□□□ 1.86
LINC00221-202ENST00000619530 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
LINC00221-202ENST00000619530 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
LINC00221-202ENST00000619530 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
LINC00221-202ENST00000619530 NPM1P06748 294 aaKnown RBP eCLIP26.38■■□□□ 1.81
LINC00221-202ENST00000619530 IQGAP2Q13576 1575 aa26.38■■□□□ 1.81
LINC00221-202ENST00000619530 CARMIL2Q6F5E8 1435 aa26.36■■□□□ 1.81
LINC00221-202ENST00000619530 PTPRGP23470 1445 aa26.34■■□□□ 1.81
LINC00221-202ENST00000619530 TNIKQ9UKE5 1360 aa26.3■■□□□ 1.8
LINC00221-202ENST00000619530 CSRNP3Q8WYN3 585 aa26.29■■□□□ 1.8
LINC00221-202ENST00000619530 ADCY10Q96PN6 1610 aa26.27■■□□□ 1.8
LINC00221-202ENST00000619530 PRXQ9BXM0 1461 aa26.27■■□□□ 1.8
LINC00221-202ENST00000619530 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
LINC00221-202ENST00000619530 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
LINC00221-202ENST00000619530 UGGT2Q9NYU1 1516 aa26.22■■□□□ 1.79
LINC00221-202ENST00000619530 CTTNBP2Q8WZ74 1663 aa26.2■■□□□ 1.78
LINC00221-202ENST00000619530 FAM69CQ0P6D2 419 aa26.18■■□□□ 1.78
LINC00221-202ENST00000619530 CHIC1Q5VXU3 224 aa26.17■■□□□ 1.78
LINC00221-202ENST00000619530 KIF13AQ9H1H9 1805 aa26.14■■□□□ 1.77
LINC00221-202ENST00000619530 KIAA0556O60303 1618 aa26.13■■□□□ 1.77
LINC00221-202ENST00000619530 MAPKBP1O60336 1514 aa26.12■■□□□ 1.77
LINC00221-202ENST00000619530 EEA1Q15075 1411 aa26.12■■□□□ 1.77
LINC00221-202ENST00000619530 UACAQ9BZF9 1416 aa26.11■■□□□ 1.77
LINC00221-202ENST00000619530 ABCC10Q5T3U5 1492 aa26.09■■□□□ 1.77
LINC00221-202ENST00000619530 GOLGA3Q08378 1498 aa26.08■■□□□ 1.77
LINC00221-202ENST00000619530 ABCC2Q92887 1545 aa26.08■■□□□ 1.76
LINC00221-202ENST00000619530 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
LINC00221-202ENST00000619530 RANGAP1P46060 587 aaPredicted RBP26.05■■□□□ 1.76
LINC00221-202ENST00000619530 UHRF1BP1LA0JNW5 1464 aa26.05■■□□□ 1.76
LINC00221-202ENST00000619530 EHMT2Q96KQ7 1210 aa26.03■■□□□ 1.76
LINC00221-202ENST00000619530 DIP2BQ9P265 1576 aa26.01■■□□□ 1.75
LINC00221-202ENST00000619530 ASXL2Q76L83 1435 aa25.99■■□□□ 1.75
LINC00221-202ENST00000619530 PLB1Q6P1J6 1458 aa25.98■■□□□ 1.75
LINC00221-202ENST00000619530 TSPOAP1O95153 1857 aa25.94■■□□□ 1.74
LINC00221-202ENST00000619530 KDM5BQ9UGL1 1544 aa25.93■■□□□ 1.74
LINC00221-202ENST00000619530 ZCCHC11Q5TAX3 1644 aaKnown RBP25.92■■□□□ 1.74
LINC00221-202ENST00000619530 ARID3CA6NKF2 412 aa25.9■■□□□ 1.74
LINC00221-202ENST00000619530 ABCA8O94911 1581 aa25.88■■□□□ 1.73
LINC00221-202ENST00000619530 KIF21BO75037 1637 aa25.87■■□□□ 1.73
LINC00221-202ENST00000619530 UBTFP17480 764 aaKnown RBP25.87■■□□□ 1.73
LINC00221-202ENST00000619530 KCNH8Q96L42 1107 aa25.83■■□□□ 1.73
LINC00221-202ENST00000619530 SAMD9Q5K651 1589 aa25.83■■□□□ 1.73
LINC00221-202ENST00000619530 EPRSP07814 1512 aaKnown RBP25.8■■□□□ 1.72
LINC00221-202ENST00000619530 GLI2P10070 1586 aa25.8■■□□□ 1.72
LINC00221-202ENST00000619530 FHOD3Q2V2M9 1422 aa25.77■■□□□ 1.72
LINC00221-202ENST00000619530 WDR7Q9Y4E6 1490 aa25.76■■□□□ 1.71
LINC00221-202ENST00000619530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.74■■□□□ 1.71
LINC00221-202ENST00000619530 HNRNPUL2Q1KMD3 747 aaKnown RBP25.74■■□□□ 1.71
LINC00221-202ENST00000619530 KDM6BO15054 1643 aa25.73■■□□□ 1.71
LINC00221-202ENST00000619530 ATP10BO94823 1461 aa25.72■■□□□ 1.71
LINC00221-202ENST00000619530 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
LINC00221-202ENST00000619530 PPRC1Q5VV67 1664 aaKnown RBP25.69■■□□□ 1.7
LINC00221-202ENST00000619530 MAP3K4Q9Y6R4 1608 aa25.68■■□□□ 1.7
LINC00221-202ENST00000619530 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
LINC00221-202ENST00000619530 EFCAB5A4FU69 1503 aa25.66■■□□□ 1.7
LINC00221-202ENST00000619530 CD109Q6YHK3 1445 aa25.62■■□□□ 1.69
LINC00221-202ENST00000619530 TEX14Q8IWB6 1497 aa25.61■■□□□ 1.69
LINC00221-202ENST00000619530 ATP1B4Q9UN42 357 aaPredicted RBP25.6■■□□□ 1.69
LINC00221-202ENST00000619530 NUP153P49790 1475 aaKnown RBP25.6■■□□□ 1.69
LINC00221-202ENST00000619530 CFAP43Q8NDM7 1665 aa25.55■■□□□ 1.68
LINC00221-202ENST00000619530 COL17A1Q9UMD9 1497 aaPredicted RBP25.54■■□□□ 1.68
LINC00221-202ENST00000619530 PLEKHD1A6NEE1 506 aa25.53■■□□□ 1.68
LINC00221-202ENST00000619530 ARHGAP35Q9NRY4 1499 aa25.53■■□□□ 1.68
LINC00221-202ENST00000619530 MAGI3Q5TCQ9 1506 aa25.5■■□□□ 1.67
LINC00221-202ENST00000619530 FMN1Q68DA7 1419 aa25.47■■□□□ 1.67
LINC00221-202ENST00000619530 ABCA9Q8IUA7 1624 aa25.43■■□□□ 1.66
LINC00221-202ENST00000619530 CDK13Q14004 1512 aaKnown RBP25.43■■□□□ 1.66
LINC00221-202ENST00000619530 KDM4FA0A1W2PPD8 638 aa25.37■■□□□ 1.65
LINC00221-202ENST00000619530 HECW1Q76N89 1606 aa25.37■■□□□ 1.65
LINC00221-202ENST00000619530 CDK11AQ9UQ88 783 aaPredicted RBP25.34■■□□□ 1.65
LINC00221-202ENST00000619530 CLIP1P30622 1438 aa25.31■■□□□ 1.64
LINC00221-202ENST00000619530 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
LINC00221-202ENST00000619530 RAPGEF3O95398 923 aa25.3■■□□□ 1.64
LINC00221-202ENST00000619530 PHLDB1Q86UU1 1377 aa25.3■■□□□ 1.64
LINC00221-202ENST00000619530 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.29■■□□□ 1.64
LINC00221-202ENST00000619530 NEO1Q92859 1461 aa25.27■■□□□ 1.64
LINC00221-202ENST00000619530 TTC37Q6PGP7 1564 aa25.25■■□□□ 1.63
LINC00221-202ENST00000619530 CASKIN1Q8WXD9 1431 aa25.24■■□□□ 1.63
LINC00221-202ENST00000619530 LRRIQ1Q96JM4 1722 aa25.24■■□□□ 1.63
LINC00221-202ENST00000619530 PCF11O94913 1555 aaKnown RBP25.23■■□□□ 1.63
LINC00221-202ENST00000619530 FANCAO15360 1455 aa25.22■■□□□ 1.63
LINC00221-202ENST00000619530 AKNAQ7Z591 1439 aa25.21■■□□□ 1.63
LINC00221-202ENST00000619530 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
LINC00221-202ENST00000619530 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
LINC00221-202ENST00000619530 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
LINC00221-202ENST00000619530 PLCH2O75038 1416 aa25.17■■□□□ 1.62
LINC00221-202ENST00000619530 KIF14Q15058 1648 aa25.16■■□□□ 1.62
LINC00221-202ENST00000619530 CCDC18Q5T9S5 1454 aa25.15■■□□□ 1.62
LINC00221-202ENST00000619530 DENND4BO75064 1496 aaPredicted RBP25.14■■□□□ 1.62
LINC00221-202ENST00000619530 CFAP74Q9C0B2 1584 aa25.14■■□□□ 1.62
LINC00221-202ENST00000619530 EFCAB2Q5VUJ9 269 aa25.14■■□□□ 1.61
LINC00221-202ENST00000619530 FYCO1Q9BQS8 1478 aa25.14■■□□□ 1.61
LINC00221-202ENST00000619530 CEP162Q5TB80 1403 aa25.11■■□□□ 1.61
LINC00221-202ENST00000619530 FRMPD1Q5SYB0 1578 aa25.11■■□□□ 1.61
LINC00221-202ENST00000619530 MYO5CQ9NQX4 1742 aa25.1■■□□□ 1.61
LINC00221-202ENST00000619530 SCAPERQ9BY12 1400 aa25.08■■□□□ 1.61
LINC00221-202ENST00000619530 ARID4BQ4LE39 1312 aaPredicted RBP25.06■■□□□ 1.6
LINC00221-202ENST00000619530 RICTORQ6R327 1708 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms