RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 NISCHQ9Y2I1 1504 aa38.31■■■■□ 3.72
LINC00221-202ENST00000619530 CCDC180Q9P1Z9 1646 aa34.11■■■■□ 3.05
LINC00221-202ENST00000619530 ABCC9O60706 1549 aa33.87■■■■□ 3.01
LINC00221-202ENST00000619530 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
LINC00221-202ENST00000619530 RB1CC1Q8TDY2 1594 aa32.33■■■□□ 2.77
LINC00221-202ENST00000619530 NACADO15069 1562 aa32.2■■■□□ 2.74
LINC00221-202ENST00000619530 MYO15BQ96JP2 1530 aa31.81■■■□□ 2.68
LINC00221-202ENST00000619530 ZCCHC6Q5VYS8 1495 aaKnown RBP31.79■■■□□ 2.68
LINC00221-202ENST00000619530 PABPN1Q86U42 306 aaKnown RBP eCLIP31.69■■■□□ 2.66
LINC00221-202ENST00000619530 UNC13AQ9UPW8 1703 aa31.6■■■□□ 2.65
LINC00221-202ENST00000619530 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
LINC00221-202ENST00000619530 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
LINC00221-202ENST00000619530 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
LINC00221-202ENST00000619530 SCRIBQ14160 1630 aa31.24■■■□□ 2.59
LINC00221-202ENST00000619530 SHROOM4Q9ULL8 1493 aa30.87■■■□□ 2.53
LINC00221-202ENST00000619530 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
LINC00221-202ENST00000619530 CC2D2AQ9P2K1 1620 aa30.56■■■□□ 2.48
LINC00221-202ENST00000619530 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
LINC00221-202ENST00000619530 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
LINC00221-202ENST00000619530 NCAPD3P42695 1498 aa29.73■■■□□ 2.35
LINC00221-202ENST00000619530 ATAD2BQ9ULI0 1458 aa29.72■■■□□ 2.35
LINC00221-202ENST00000619530 BAZ1AQ9NRL2 1556 aaPredicted RBP29.68■■■□□ 2.34
LINC00221-202ENST00000619530 SMARCA2P51531 1590 aa29.64■■■□□ 2.34
LINC00221-202ENST00000619530 MROH2BQ7Z745 1585 aa29.56■■■□□ 2.32
LINC00221-202ENST00000619530 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
LINC00221-202ENST00000619530 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
LINC00221-202ENST00000619530 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
LINC00221-202ENST00000619530 WIZO95785 1651 aa29.24■■■□□ 2.27
LINC00221-202ENST00000619530 ERCC6Q03468 1493 aa29.21■■■□□ 2.27
LINC00221-202ENST00000619530 NESP48681 1621 aa29.2■■■□□ 2.27
LINC00221-202ENST00000619530 RSF1Q96T23 1441 aaPredicted RBP29.1■■■□□ 2.25
LINC00221-202ENST00000619530 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
LINC00221-202ENST00000619530 CUX2O14529 1486 aa28.9■■■□□ 2.22
LINC00221-202ENST00000619530 CADPSQ9ULU8 1353 aa28.89■■■□□ 2.21
LINC00221-202ENST00000619530 PDS5BQ9NTI5 1447 aa28.85■■■□□ 2.21
LINC00221-202ENST00000619530 TOP2AP11388 1531 aaKnown RBP28.84■■■□□ 2.21
LINC00221-202ENST00000619530 KIF21AQ7Z4S6 1674 aa28.8■■■□□ 2.2
LINC00221-202ENST00000619530 THOC2Q8NI27 1593 aaKnown RBP28.71■■■□□ 2.19
LINC00221-202ENST00000619530 CFTRP13569 1480 aa28.61■■■□□ 2.17
LINC00221-202ENST00000619530 CCDC88BA6NC98 1476 aa28.58■■■□□ 2.17
LINC00221-202ENST00000619530 FANCD2Q9BXW9 1451 aa28.57■■■□□ 2.16
LINC00221-202ENST00000619530 MRC2Q9UBG0 1479 aa28.56■■■□□ 2.16
LINC00221-202ENST00000619530 CEP164Q9UPV0 1460 aa28.54■■■□□ 2.16
LINC00221-202ENST00000619530 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.15
LINC00221-202ENST00000619530 WDR62O43379 1518 aa28.43■■■□□ 2.14
LINC00221-202ENST00000619530 SUPT5HO00267 1087 aaKnown RBP28.34■■■□□ 2.13
LINC00221-202ENST00000619530 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
LINC00221-202ENST00000619530 URB2Q14146 1524 aaKnown RBP28.29■■■□□ 2.12
LINC00221-202ENST00000619530 TOPBP1Q92547 1522 aa28.06■■■□□ 2.08
LINC00221-202ENST00000619530 ABCC8Q09428 1581 aa28■■■□□ 2.07
LINC00221-202ENST00000619530 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
LINC00221-202ENST00000619530 IFT140Q96RY7 1462 aa27.95■■■□□ 2.06
LINC00221-202ENST00000619530 ZNF608Q9ULD9 1512 aaPredicted RBP27.9■■■□□ 2.06
LINC00221-202ENST00000619530 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
LINC00221-202ENST00000619530 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
LINC00221-202ENST00000619530 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
LINC00221-202ENST00000619530 TARBP1Q13395 1621 aaKnown RBP27.75■■■□□ 2.03
LINC00221-202ENST00000619530 SOGA1O94964 1423 aa27.74■■■□□ 2.03
LINC00221-202ENST00000619530 CUX1P39880 1505 aa27.74■■■□□ 2.03
LINC00221-202ENST00000619530 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.03
LINC00221-202ENST00000619530 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
LINC00221-202ENST00000619530 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
LINC00221-202ENST00000619530 TDRD9Q8NDG6 1382 aaKnown RBP27.66■■■□□ 2.02
LINC00221-202ENST00000619530 FBLN2P98095 1184 aa27.58■■■□□ 2.01
LINC00221-202ENST00000619530 TRIM41Q8WV44 630 aa27.57■■■□□ 2
LINC00221-202ENST00000619530 WRNQ14191 1432 aaPredicted RBP eCLIP27.46■■□□□ 1.99
LINC00221-202ENST00000619530 CHD1O14646 1710 aa27.45■■□□□ 1.99
LINC00221-202ENST00000619530 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
LINC00221-202ENST00000619530 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
LINC00221-202ENST00000619530 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
LINC00221-202ENST00000619530 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
LINC00221-202ENST00000619530 SYNJ1O43426 1573 aa27.39■■□□□ 1.97
LINC00221-202ENST00000619530 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
LINC00221-202ENST00000619530 GAPVD1Q14C86 1478 aa27.38■■□□□ 1.97
LINC00221-202ENST00000619530 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
LINC00221-202ENST00000619530 BIVM-ERCC5R4GMW8 1640 aa27.36■■□□□ 1.97
LINC00221-202ENST00000619530 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
LINC00221-202ENST00000619530 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
LINC00221-202ENST00000619530 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
LINC00221-202ENST00000619530 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
LINC00221-202ENST00000619530 PBRM1Q86U86 1689 aa27.3■■□□□ 1.96
LINC00221-202ENST00000619530 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
LINC00221-202ENST00000619530 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
LINC00221-202ENST00000619530 ARHGEF11O15085 1522 aa27.25■■□□□ 1.95
LINC00221-202ENST00000619530 CYB5RLQ6IPT4 315 aa27.18■■□□□ 1.94
LINC00221-202ENST00000619530 CLASP1Q7Z460 1538 aa27.09■■□□□ 1.93
LINC00221-202ENST00000619530 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
LINC00221-202ENST00000619530 GRIN2AQ12879 1464 aa27.03■■□□□ 1.92
LINC00221-202ENST00000619530 FHAD1B1AJZ9 1412 aa27.03■■□□□ 1.92
LINC00221-202ENST00000619530 ERICH3Q5RHP9 1530 aa27.02■■□□□ 1.92
LINC00221-202ENST00000619530 ARAP1Q96P48 1450 aa27.01■■□□□ 1.91
LINC00221-202ENST00000619530 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
LINC00221-202ENST00000619530 KIF27Q86VH2 1401 aa26.91■■□□□ 1.9
LINC00221-202ENST00000619530 NUP160Q12769 1436 aa26.89■■□□□ 1.9
LINC00221-202ENST00000619530 IGF1RP08069 1367 aa26.87■■□□□ 1.89
LINC00221-202ENST00000619530 ERCC6L2Q5T890 1561 aa26.79■■□□□ 1.88
LINC00221-202ENST00000619530 TRHP20396 242 aaPredicted RBP26.76■■□□□ 1.87
LINC00221-202ENST00000619530 JPH4Q96JJ6 628 aa26.75■■□□□ 1.87
LINC00221-202ENST00000619530 CUL7Q14999 1698 aa26.71■■□□□ 1.87
LINC00221-202ENST00000619530 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms