RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-224ENST00000619186 CARMIL1Q5VZK9 1371 aa16.3■□□□□ 0.2
TP53-224ENST00000619186 ZNF316A6NFI3 1004 aaPredicted RBP16.24■□□□□ 0.19
TP53-224ENST00000619186 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
TP53-224ENST00000619186 WDR97A6NE52 1622 aa16.23■□□□□ 0.19
TP53-224ENST00000619186 MRC2Q9UBG0 1479 aa16.22■□□□□ 0.19
TP53-224ENST00000619186 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
TP53-224ENST00000619186 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.188e-7■■■□□ 16.1
TP53-224ENST00000619186 ERCC6Q03468 1493 aa16.18■□□□□ 0.18
TP53-224ENST00000619186 GAPVD1Q14C86 1478 aa16.18■□□□□ 0.18
TP53-224ENST00000619186 ABCA5Q8WWZ7 1642 aa16.17■□□□□ 0.18
TP53-224ENST00000619186 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
TP53-224ENST00000619186 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
TP53-224ENST00000619186 DHX57Q6P158 1386 aaKnown RBP16.16■□□□□ 0.18
TP53-224ENST00000619186 RRBP1Q9P2E9 1410 aaKnown RBP16.15■□□□□ 0.18
TP53-224ENST00000619186 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
TP53-224ENST00000619186 ZNF608Q9ULD9 1512 aaPredicted RBP16.14■□□□□ 0.17
TP53-224ENST00000619186 ITGAEP38570 1179 aa16.13■□□□□ 0.17
TP53-224ENST00000619186 AEBP2Q6ZN18 517 aaPredicted RBP16.12■□□□□ 0.17
TP53-224ENST00000619186 PRKCSHP14314 528 aaPredicted RBP16.12■□□□□ 0.17
TP53-224ENST00000619186 WDR62O43379 1518 aa16.11■□□□□ 0.17
TP53-224ENST00000619186 MIER1Q8N108 512 aa16.09■□□□□ 0.17
TP53-224ENST00000619186 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
TP53-224ENST00000619186 KCNA4P22459 653 aa16.08■□□□□ 0.16
TP53-224ENST00000619186 CUL7Q14999 1698 aa16.08■□□□□ 0.16
TP53-224ENST00000619186 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
TP53-224ENST00000619186 TIAM1Q13009 1591 aa16.07■□□□□ 0.16
TP53-224ENST00000619186 YTHDC1Q96MU7 727 aaKnown RBP16.05■□□□□ 0.16
TP53-224ENST00000619186 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
TP53-224ENST00000619186 PHLDB1Q86UU1 1377 aa16.03■□□□□ 0.16
TP53-224ENST00000619186 FHOD3Q2V2M9 1422 aa16.03■□□□□ 0.16
TP53-224ENST00000619186 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
TP53-224ENST00000619186 PCF11O94913 1555 aaKnown RBP16.02■□□□□ 0.15
TP53-224ENST00000619186 ERICH6Q7L0X2 663 aa16.01■□□□□ 0.15
TP53-224ENST00000619186 GTF3C3Q9Y5Q9 886 aa16.01■□□□□ 0.15
TP53-224ENST00000619186 LRRC9Q6ZRR7 1453 aa16.01■□□□□ 0.15
TP53-224ENST00000619186 ATP1B4Q9UN42 357 aaPredicted RBP16.01■□□□□ 0.15
TP53-224ENST00000619186 ARXQ96QS3 562 aa15.99■□□□□ 0.15
TP53-224ENST00000619186 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
TP53-224ENST00000619186 RAB3GAP2Q9H2M9 1393 aa15.97■□□□□ 0.15
TP53-224ENST00000619186 GRIN2BQ13224 1484 aa15.97■□□□□ 0.15
TP53-224ENST00000619186 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
TP53-224ENST00000619186 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
TP53-224ENST00000619186 MAP3K1Q13233 1512 aa15.96■□□□□ 0.15
TP53-224ENST00000619186 CENPBP07199 599 aaPredicted RBP15.96■□□□□ 0.14
TP53-224ENST00000619186 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
TP53-224ENST00000619186 FHAD1B1AJZ9 1412 aa15.95■□□□□ 0.14
TP53-224ENST00000619186 CFAP43Q8NDM7 1665 aa15.93■□□□□ 0.14
TP53-224ENST00000619186 SNAPC4Q5SXM2 1469 aa15.93■□□□□ 0.14
TP53-224ENST00000619186 MAPKBP1O60336 1514 aa15.93■□□□□ 0.14
TP53-224ENST00000619186 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
TP53-224ENST00000619186 FBLN2P98095 1184 aa15.89■□□□□ 0.13
TP53-224ENST00000619186 CASKIN1Q8WXD9 1431 aa15.86■□□□□ 0.13
TP53-224ENST00000619186 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
TP53-224ENST00000619186 FYCO1Q9BQS8 1478 aa15.85■□□□□ 0.13
TP53-224ENST00000619186 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
TP53-224ENST00000619186 EFCAB5A4FU69 1503 aa15.85■□□□□ 0.13
TP53-224ENST00000619186 LRRIQ1Q96JM4 1722 aa15.84■□□□□ 0.13
TP53-224ENST00000619186 SAMD9Q5K651 1589 aa15.84■□□□□ 0.13
TP53-224ENST00000619186 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
TP53-224ENST00000619186 GRIN2AQ12879 1464 aa15.82■□□□□ 0.12
TP53-224ENST00000619186 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
TP53-224ENST00000619186 IQGAP2Q13576 1575 aa15.81■□□□□ 0.12
TP53-224ENST00000619186 ARID3CA6NKF2 412 aa15.79■□□□□ 0.12
TP53-224ENST00000619186 PTPRKQ15262 1439 aa15.77■□□□□ 0.12
TP53-224ENST00000619186 MAGI1Q96QZ7 1491 aaPredicted RBP15.77■□□□□ 0.11
TP53-224ENST00000619186 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
TP53-224ENST00000619186 SYNJ2O15056 1496 aa15.76■□□□□ 0.11
TP53-224ENST00000619186 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
TP53-224ENST00000619186 FGD6Q6ZV73 1430 aa15.75■□□□□ 0.11
TP53-224ENST00000619186 KIAA0586Q9BVV6 1533 aa15.74■□□□□ 0.11
TP53-224ENST00000619186 MTUS2Q5JR59 1369 aa15.73■□□□□ 0.11
TP53-224ENST00000619186 MAGI3Q5TCQ9 1506 aa15.72■□□□□ 0.11
TP53-224ENST00000619186 DISP1Q96F81 1524 aa15.72■□□□□ 0.11
TP53-224ENST00000619186 KCNH8Q96L42 1107 aa15.71■□□□□ 0.11
TP53-224ENST00000619186 UGGT2Q9NYU1 1516 aa15.7■□□□□ 0.1
TP53-224ENST00000619186 HIRIP3Q9BW71 556 aaPredicted RBP15.7■□□□□ 0.1
TP53-224ENST00000619186 NCOA2Q15596 1464 aa15.7■□□□□ 0.1
TP53-224ENST00000619186 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
TP53-224ENST00000619186 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.67■□□□□ 0.1
TP53-224ENST00000619186 JPH4Q96JJ6 628 aa15.67■□□□□ 0.1
TP53-224ENST00000619186 NUP160Q12769 1436 aa15.66■□□□□ 0.1
TP53-224ENST00000619186 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
TP53-224ENST00000619186 CDK13Q14004 1512 aaKnown RBP15.64■□□□□ 0.09
TP53-224ENST00000619186 MYOM3Q5VTT5 1437 aa15.64■□□□□ 0.09
TP53-224ENST00000619186 CCDC18Q5T9S5 1454 aa15.64■□□□□ 0.09
TP53-224ENST00000619186 PTPN23Q9H3S7 1636 aa15.62■□□□□ 0.09
TP53-224ENST00000619186 CHD1O14646 1710 aa15.62■□□□□ 0.09
TP53-224ENST00000619186 HFM1A2PYH4 1435 aa15.61■□□□□ 0.09
TP53-224ENST00000619186 NAIPQ13075 1403 aa15.61■□□□□ 0.09
TP53-224ENST00000619186 DDX10Q13206 875 aaKnown RBP15.61■□□□□ 0.09
TP53-224ENST00000619186 SUPT6HQ7KZ85 1726 aaKnown RBP15.6■□□□□ 0.09
TP53-224ENST00000619186 PPP1R15AO75807 674 aaPredicted RBP15.6■□□□□ 0.09
TP53-224ENST00000619186 EPRSP07814 1512 aaKnown RBP15.6■□□□□ 0.09
TP53-224ENST00000619186 CHIC2Q9UKJ5 165 aa15.6■□□□□ 0.09
TP53-224ENST00000619186 ARHGEF11O15085 1522 aa15.59■□□□□ 0.09
TP53-224ENST00000619186 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
TP53-224ENST00000619186 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.08
TP53-224ENST00000619186 PLB1Q6P1J6 1458 aa15.58■□□□□ 0.08
TP53-224ENST00000619186 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
TP53-224ENST00000619186 NUP153P49790 1475 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms