RNA–Protein interactions for RNA: ENST00000619186.4

TP53-224, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,271 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-224ENST00000619186 NISCHQ9Y2I1 1504 aa23.1■■□□□ 1.29
TP53-224ENST00000619186 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.78
TP53-224ENST00000619186 SHROOM4Q9ULL8 1493 aa19.56■□□□□ 0.72
TP53-224ENST00000619186 ZCCHC6Q5VYS8 1495 aaKnown RBP19.41■□□□□ 0.7
TP53-224ENST00000619186 DCAF8L2P0C7V8 631 aa19.36■□□□□ 0.69
TP53-224ENST00000619186 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
TP53-224ENST00000619186 ABCC9O60706 1549 aa19.01■□□□□ 0.63
TP53-224ENST00000619186 DCAF1Q9Y4B6 1507 aa18.92■□□□□ 0.62
TP53-224ENST00000619186 SLC24A1O60721 1099 aa18.67■□□□□ 0.58
TP53-224ENST00000619186 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
TP53-224ENST00000619186 MYO15BQ96JP2 1530 aa18.58■□□□□ 0.57
TP53-224ENST00000619186 NACADO15069 1562 aa18.53■□□□□ 0.56
TP53-224ENST00000619186 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
TP53-224ENST00000619186 RB1CC1Q8TDY2 1594 aa18.37■□□□□ 0.53
TP53-224ENST00000619186 UNC13AQ9UPW8 1703 aa18.16■□□□□ 0.5
TP53-224ENST00000619186 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
TP53-224ENST00000619186 RSF1Q96T23 1441 aaPredicted RBP18.09■□□□□ 0.49
TP53-224ENST00000619186 PABPN1Q86U42 306 aaKnown RBP eCLIP18.08■□□□□ 0.48
TP53-224ENST00000619186 LOC105371045A0A1W2PR82 267 aa18.03■□□□□ 0.48
TP53-224ENST00000619186 MROH2BQ7Z745 1585 aa17.97■□□□□ 0.47
TP53-224ENST00000619186 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
TP53-224ENST00000619186 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
TP53-224ENST00000619186 WIZO95785 1651 aa17.85■□□□□ 0.45
TP53-224ENST00000619186 BAZ1AQ9NRL2 1556 aaPredicted RBP17.76■□□□□ 0.43
TP53-224ENST00000619186 HRCP23327 699 aa17.74■□□□□ 0.43
TP53-224ENST00000619186 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
TP53-224ENST00000619186 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
TP53-224ENST00000619186 FAM9AQ8IZU1 332 aaPredicted RBP17.67■□□□□ 0.42
TP53-224ENST00000619186 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
TP53-224ENST00000619186 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
TP53-224ENST00000619186 TOP2AP11388 1531 aaKnown RBP17.5■□□□□ 0.39
TP53-224ENST00000619186 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
TP53-224ENST00000619186 EIF4G1Q04637 1599 aaKnown RBP17.44■□□□□ 0.38
TP53-224ENST00000619186 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
TP53-224ENST00000619186 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
TP53-224ENST00000619186 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
TP53-224ENST00000619186 PEG3Q9GZU2 1588 aa17.39■□□□□ 0.38
TP53-224ENST00000619186 ABCC8Q09428 1581 aa17.34■□□□□ 0.37
TP53-224ENST00000619186 BAZ1BQ9UIG0 1483 aaKnown RBP17.31■□□□□ 0.36
TP53-224ENST00000619186 NCAPD3P42695 1498 aa17.17■□□□□ 0.34
TP53-224ENST00000619186 SOGA1O94964 1423 aa17.14■□□□□ 0.34
TP53-224ENST00000619186 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
TP53-224ENST00000619186 RUSC2Q8N2Y8 1516 aa17.11■□□□□ 0.33
TP53-224ENST00000619186 HMGXB3Q12766 1538 aa17.1■□□□□ 0.33
TP53-224ENST00000619186 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
TP53-224ENST00000619186 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
TP53-224ENST00000619186 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
TP53-224ENST00000619186 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
TP53-224ENST00000619186 WRNQ14191 1432 aaPredicted RBP eCLIP16.95■□□□□ 0.3
TP53-224ENST00000619186 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
TP53-224ENST00000619186 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
TP53-224ENST00000619186 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
TP53-224ENST00000619186 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
TP53-224ENST00000619186 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
TP53-224ENST00000619186 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
TP53-224ENST00000619186 CFTRP13569 1480 aa16.87■□□□□ 0.29
TP53-224ENST00000619186 EEA1Q15075 1411 aa16.83■□□□□ 0.29
TP53-224ENST00000619186 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
TP53-224ENST00000619186 GOLGA3Q08378 1498 aa16.8■□□□□ 0.28
TP53-224ENST00000619186 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
TP53-224ENST00000619186 NESP48681 1621 aa16.78■□□□□ 0.28
TP53-224ENST00000619186 CUX1P39880 1505 aa16.76■□□□□ 0.27
TP53-224ENST00000619186 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
TP53-224ENST00000619186 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
TP53-224ENST00000619186 RAPGEF2Q9Y4G8 1499 aa16.71■□□□□ 0.27
TP53-224ENST00000619186 RTN4Q9NQC3 1192 aaKnown RBP16.7■□□□□ 0.26
TP53-224ENST00000619186 CEP164Q9UPV0 1460 aa16.7■□□□□ 0.26
TP53-224ENST00000619186 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
TP53-224ENST00000619186 KIF21BO75037 1637 aa16.69■□□□□ 0.26
TP53-224ENST00000619186 RANGAP1P46060 587 aaPredicted RBP16.69■□□□□ 0.26
TP53-224ENST00000619186 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
TP53-224ENST00000619186 FANCD2Q9BXW9 1451 aa16.64■□□□□ 0.25
TP53-224ENST00000619186 CLIP1P30622 1438 aa16.64■□□□□ 0.25
TP53-224ENST00000619186 NCBP3Q53F19 620 aaKnown RBP16.63■□□□□ 0.25
TP53-224ENST00000619186 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
TP53-224ENST00000619186 FGD5Q6ZNL6 1462 aa16.53■□□□□ 0.24
TP53-224ENST00000619186 HNRNPUL2Q1KMD3 747 aaKnown RBP16.52■□□□□ 0.24
TP53-224ENST00000619186 LAMC3Q9Y6N6 1575 aa16.52■□□□□ 0.23
TP53-224ENST00000619186 PRXQ9BXM0 1461 aa16.5■□□□□ 0.23
TP53-224ENST00000619186 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
TP53-224ENST00000619186 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
TP53-224ENST00000619186 CUX2O14529 1486 aa16.47■□□□□ 0.23
TP53-224ENST00000619186 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
TP53-224ENST00000619186 KIF27Q86VH2 1401 aa16.46■□□□□ 0.23
TP53-224ENST00000619186 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
TP53-224ENST00000619186 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
TP53-224ENST00000619186 ARAP1Q96P48 1450 aa16.43■□□□□ 0.22
TP53-224ENST00000619186 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
TP53-224ENST00000619186 ERICH3Q5RHP9 1530 aa16.42■□□□□ 0.22
TP53-224ENST00000619186 PDS5BQ9NTI5 1447 aa16.42■□□□□ 0.22
TP53-224ENST00000619186 IGF1RP08069 1367 aa16.4■□□□□ 0.22
TP53-224ENST00000619186 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
TP53-224ENST00000619186 APLP2Q06481 763 aa16.38■□□□□ 0.21
TP53-224ENST00000619186 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
TP53-224ENST00000619186 DIEXFQ68CQ4 756 aaKnown RBP16.36■□□□□ 0.21
TP53-224ENST00000619186 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
TP53-224ENST00000619186 MYT1Q01538 1121 aa16.32■□□□□ 0.2
TP53-224ENST00000619186 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
TP53-224ENST00000619186 ABCA10Q8WWZ4 1543 aa16.31■□□□□ 0.2
TP53-224ENST00000619186 ARHGAP35Q9NRY4 1499 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms