RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
SEMA3B-214ENST00000619119 ERICH6Q7L0X2 663 aa23.18■■□□□ 1.3
SEMA3B-214ENST00000619119 KIF21AQ7Z4S6 1674 aa23.18■■□□□ 1.3
SEMA3B-214ENST00000619119 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
SEMA3B-214ENST00000619119 ABCA10Q8WWZ4 1543 aa23.16■■□□□ 1.3
SEMA3B-214ENST00000619119 ARAP1Q96P48 1450 aa23.13■■□□□ 1.29
SEMA3B-214ENST00000619119 P3H3Q8IVL6 736 aa23.09■■□□□ 1.29
SEMA3B-214ENST00000619119 ARHGAP35Q9NRY4 1499 aa23.06■■□□□ 1.28
SEMA3B-214ENST00000619119 HNRNPUL2Q1KMD3 747 aaKnown RBP23.02■■□□□ 1.28
SEMA3B-214ENST00000619119 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
SEMA3B-214ENST00000619119 KANK4Q5T7N3 995 aaPredicted RBP23.01■■□□□ 1.27
SEMA3B-214ENST00000619119 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
SEMA3B-214ENST00000619119 ATP1B4Q9UN42 357 aaPredicted RBP22.96■■□□□ 1.27
SEMA3B-214ENST00000619119 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
SEMA3B-214ENST00000619119 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
SEMA3B-214ENST00000619119 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
SEMA3B-214ENST00000619119 BCANQ96GW7 911 aa22.91■■□□□ 1.26
SEMA3B-214ENST00000619119 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.265e-8■■■■□ 25.4
SEMA3B-214ENST00000619119 ERCC6Q03468 1493 aa22.9■■□□□ 1.26
SEMA3B-214ENST00000619119 ABCA5Q8WWZ7 1642 aa22.89■■□□□ 1.25
SEMA3B-214ENST00000619119 CUL7Q14999 1698 aa22.88■■□□□ 1.25
SEMA3B-214ENST00000619119 TARBP1Q13395 1621 aaKnown RBP22.87■■□□□ 1.25
SEMA3B-214ENST00000619119 FHOD3Q2V2M9 1422 aa22.86■■□□□ 1.25
SEMA3B-214ENST00000619119 ZNF608Q9ULD9 1512 aaPredicted RBP22.79■■□□□ 1.24
SEMA3B-214ENST00000619119 ANO8Q9HCE9 1232 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-214ENST00000619119 RBM19Q9Y4C8 960 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-214ENST00000619119 ITGAEP38570 1179 aa22.73■■□□□ 1.23
SEMA3B-214ENST00000619119 WDR62O43379 1518 aa22.73■■□□□ 1.23
SEMA3B-214ENST00000619119 CTTNBP2Q8WZ74 1663 aa22.73■■□□□ 1.23
SEMA3B-214ENST00000619119 FHAD1B1AJZ9 1412 aa22.72■■□□□ 1.23
SEMA3B-214ENST00000619119 IFT140Q96RY7 1462 aa22.7■■□□□ 1.22
SEMA3B-214ENST00000619119 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
SEMA3B-214ENST00000619119 PCF11O94913 1555 aaKnown RBP22.68■■□□□ 1.22
SEMA3B-214ENST00000619119 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
SEMA3B-214ENST00000619119 MSH5O43196 834 aa22.66■■□□□ 1.22
SEMA3B-214ENST00000619119 TIAM1Q13009 1591 aa22.65■■□□□ 1.22
SEMA3B-214ENST00000619119 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
SEMA3B-214ENST00000619119 FBLN2P98095 1184 aa22.63■■□□□ 1.21
SEMA3B-214ENST00000619119 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
SEMA3B-214ENST00000619119 FKBP8Q14318 412 aa22.6■■□□□ 1.21
SEMA3B-214ENST00000619119 ADAMTS12P58397 1594 aa22.6■■□□□ 1.21
SEMA3B-214ENST00000619119 CCNB3Q8WWL7 1395 aa22.59■■□□□ 1.21
SEMA3B-214ENST00000619119 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
SEMA3B-214ENST00000619119 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.21
SEMA3B-214ENST00000619119 FMN1Q68DA7 1419 aa22.58■■□□□ 1.2
SEMA3B-214ENST00000619119 ARID3CA6NKF2 412 aa22.57■■□□□ 1.2
SEMA3B-214ENST00000619119 CASKIN1Q8WXD9 1431 aa22.56■■□□□ 1.2
SEMA3B-214ENST00000619119 RRBP1Q9P2E9 1410 aaKnown RBP22.56■■□□□ 1.2
SEMA3B-214ENST00000619119 EIF4G3O43432 1585 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-214ENST00000619119 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
SEMA3B-214ENST00000619119 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
SEMA3B-214ENST00000619119 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
SEMA3B-214ENST00000619119 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
SEMA3B-214ENST00000619119 MAP3K1Q13233 1512 aa22.52■■□□□ 1.2
SEMA3B-214ENST00000619119 SAMD9Q5K651 1589 aa22.52■■□□□ 1.19
SEMA3B-214ENST00000619119 DEKP35659 375 aaKnown RBP22.51■■□□□ 1.19
SEMA3B-214ENST00000619119 IQGAP2Q13576 1575 aa22.49■■□□□ 1.19
SEMA3B-214ENST00000619119 SALL2Q9Y467 1007 aaPredicted RBP22.47■■□□□ 1.19
SEMA3B-214ENST00000619119 MTUS2Q5JR59 1369 aa22.47■■□□□ 1.19
SEMA3B-214ENST00000619119 CFAP43Q8NDM7 1665 aa22.46■■□□□ 1.19
SEMA3B-214ENST00000619119 CCDC136Q96JN2 1154 aa22.45■■□□□ 1.18
SEMA3B-214ENST00000619119 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
SEMA3B-214ENST00000619119 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
SEMA3B-214ENST00000619119 KIAA0586Q9BVV6 1533 aa22.37■■□□□ 1.17
SEMA3B-214ENST00000619119 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
SEMA3B-214ENST00000619119 NEFLP07196 543 aa22.36■■□□□ 1.17
SEMA3B-214ENST00000619119 LRRIQ1Q96JM4 1722 aa22.35■■□□□ 1.17
SEMA3B-214ENST00000619119 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
SEMA3B-214ENST00000619119 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
SEMA3B-214ENST00000619119 UGGT2Q9NYU1 1516 aa22.31■■□□□ 1.16
SEMA3B-214ENST00000619119 MYT1LQ9UL68 1186 aa22.3■■□□□ 1.16
SEMA3B-214ENST00000619119 RAB3GAP2Q9H2M9 1393 aa22.29■■□□□ 1.16
SEMA3B-214ENST00000619119 DISP1Q96F81 1524 aa22.29■■□□□ 1.16
SEMA3B-214ENST00000619119 CEP170Q5SW79 1584 aa22.29■■□□□ 1.16
SEMA3B-214ENST00000619119 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
SEMA3B-214ENST00000619119 NCOA2Q15596 1464 aa22.27■■□□□ 1.16
SEMA3B-214ENST00000619119 JPH4Q96JJ6 628 aa22.27■■□□□ 1.16
SEMA3B-214ENST00000619119 FANCIQ9NVI1 1328 aa22.26■■□□□ 1.15
SEMA3B-214ENST00000619119 MAGI3Q5TCQ9 1506 aa22.26■■□□□ 1.15
SEMA3B-214ENST00000619119 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
SEMA3B-214ENST00000619119 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
SEMA3B-214ENST00000619119 KIAA0556O60303 1618 aa22.25■■□□□ 1.15
SEMA3B-214ENST00000619119 HECW1Q76N89 1606 aa22.23■■□□□ 1.15
SEMA3B-214ENST00000619119 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.22■■□□□ 1.15
SEMA3B-214ENST00000619119 CCDC18Q5T9S5 1454 aa22.21■■□□□ 1.15
SEMA3B-214ENST00000619119 SETD5Q9C0A6 1442 aa22.21■■□□□ 1.15
SEMA3B-214ENST00000619119 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
SEMA3B-214ENST00000619119 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
SEMA3B-214ENST00000619119 NUP160Q12769 1436 aa22.17■■□□□ 1.14
SEMA3B-214ENST00000619119 NBR1Q14596 966 aa22.17■■□□□ 1.14
SEMA3B-214ENST00000619119 UBE2Q2Q8WVN8 375 aa22.17■■□□□ 1.14
SEMA3B-214ENST00000619119 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
SEMA3B-214ENST00000619119 RTN4Q9NQC3 1192 aaKnown RBP22.15■■□□□ 1.14
SEMA3B-214ENST00000619119 PLB1Q6P1J6 1458 aa22.15■■□□□ 1.14
SEMA3B-214ENST00000619119 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.14
SEMA3B-214ENST00000619119 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
SEMA3B-214ENST00000619119 ERICH6BQ5W0A0 696 aa22.13■■□□□ 1.13
SEMA3B-214ENST00000619119 CARMIL2Q6F5E8 1435 aa22.13■■□□□ 1.13
SEMA3B-214ENST00000619119 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
SEMA3B-214ENST00000619119 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms