RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 PRG4Q92954 1404 aaPredicted RBP38.52■■■■□ 3.76
ARHGEF1-223ENST00000617585 KIAA0586Q9BVV6 1533 aa38.5■■■■□ 3.75
ARHGEF1-223ENST00000617585 CARMIL1Q5VZK9 1371 aa38.5■■■■□ 3.75
ARHGEF1-223ENST00000617585 TRHP20396 242 aaPredicted RBP38.43■■■■□ 3.74
ARHGEF1-223ENST00000617585 RAPGEF2Q9Y4G8 1499 aa38.22■■■■□ 3.71
ARHGEF1-223ENST00000617585 IQGAP2Q13576 1575 aa38.19■■■■□ 3.7
ARHGEF1-223ENST00000617585 ADCY10Q96PN6 1610 aa38.07■■■■□ 3.68
ARHGEF1-223ENST00000617585 CARMIL2Q6F5E8 1435 aa38.05■■■■□ 3.68
ARHGEF1-223ENST00000617585 PRXQ9BXM0 1461 aa38■■■■□ 3.67
ARHGEF1-223ENST00000617585 UGGT2Q9NYU1 1516 aa38■■■■□ 3.67
ARHGEF1-223ENST00000617585 TNIKQ9UKE5 1360 aa37.99■■■■□ 3.67
ARHGEF1-223ENST00000617585 PTPRGP23470 1445 aa37.98■■■■□ 3.67
ARHGEF1-223ENST00000617585 MAPKBP1O60336 1514 aa37.97■■■■□ 3.67
ARHGEF1-223ENST00000617585 DISP1Q96F81 1524 aa37.97■■■■□ 3.67
ARHGEF1-223ENST00000617585 KIF13AQ9H1H9 1805 aa37.97■■■■□ 3.67
ARHGEF1-223ENST00000617585 CTTNBP2Q8WZ74 1663 aa37.94■■■■□ 3.66
ARHGEF1-223ENST00000617585 NPM1P06748 294 aaKnown RBP eCLIP37.92■■■■□ 3.66
ARHGEF1-223ENST00000617585 ABCC10Q5T3U5 1492 aa37.84■■■■□ 3.65
ARHGEF1-223ENST00000617585 KIAA0556O60303 1618 aa37.83■■■■□ 3.65
ARHGEF1-223ENST00000617585 UHRF1BP1LA0JNW5 1464 aa37.81■■■■□ 3.64
ARHGEF1-223ENST00000617585 ABCC2Q92887 1545 aa37.77■■■■□ 3.64
ARHGEF1-223ENST00000617585 DIP2BQ9P265 1576 aa37.76■■■■□ 3.64
ARHGEF1-223ENST00000617585 EEA1Q15075 1411 aa37.76■■■■□ 3.63
ARHGEF1-223ENST00000617585 CSRNP3Q8WYN3 585 aa37.75■■■■□ 3.63
ARHGEF1-223ENST00000617585 UACAQ9BZF9 1416 aa37.74■■■■□ 3.63
ARHGEF1-223ENST00000617585 GOLGA3Q08378 1498 aa37.7■■■■□ 3.63
ARHGEF1-223ENST00000617585 TTBK1Q5TCY1 1321 aaPredicted RBP37.68■■■■□ 3.62
ARHGEF1-223ENST00000617585 FAM69CQ0P6D2 419 aa37.68■■■■□ 3.62
ARHGEF1-223ENST00000617585 KDM5BQ9UGL1 1544 aa37.62■■■■□ 3.61
ARHGEF1-223ENST00000617585 PLB1Q6P1J6 1458 aa37.57■■■■□ 3.6
ARHGEF1-223ENST00000617585 ASXL2Q76L83 1435 aa37.55■■■■□ 3.6
ARHGEF1-223ENST00000617585 ZCCHC11Q5TAX3 1644 aaKnown RBP37.5■■■■□ 3.59
ARHGEF1-223ENST00000617585 GLI2P10070 1586 aa37.5■■■■□ 3.59
ARHGEF1-223ENST00000617585 ABCA8O94911 1581 aa37.48■■■■□ 3.59
ARHGEF1-223ENST00000617585 CHIC1Q5VXU3 224 aa37.46■■■■□ 3.59
ARHGEF1-223ENST00000617585 SAMD9Q5K651 1589 aa37.43■■■■□ 3.58
ARHGEF1-223ENST00000617585 KIF21BO75037 1637 aa37.43■■■■□ 3.58
ARHGEF1-223ENST00000617585 TSPOAP1O95153 1857 aa37.42■■■■□ 3.58
ARHGEF1-223ENST00000617585 EPRSP07814 1512 aaKnown RBP37.36■■■■□ 3.57
ARHGEF1-223ENST00000617585 FAM9AQ8IZU1 332 aaPredicted RBP37.33■■■■□ 3.57
ARHGEF1-223ENST00000617585 PPRC1Q5VV67 1664 aaKnown RBP37.33■■■■□ 3.57
ARHGEF1-223ENST00000617585 MAP3K4Q9Y6R4 1608 aa37.28■■■■□ 3.56
ARHGEF1-223ENST00000617585 WDR7Q9Y4E6 1490 aa37.28■■■■□ 3.56
ARHGEF1-223ENST00000617585 KDM6BO15054 1643 aa37.27■■■■□ 3.56
ARHGEF1-223ENST00000617585 P3H3Q8IVL6 736 aa37.24■■■■□ 3.55
ARHGEF1-223ENST00000617585 RAPGEF6Q8TEU7 1601 aa37.15■■■■□ 3.54
ARHGEF1-223ENST00000617585 ATP10BO94823 1461 aa37.14■■■■□ 3.54
ARHGEF1-223ENST00000617585 EFCAB5A4FU69 1503 aa37.14■■■■□ 3.54
ARHGEF1-223ENST00000617585 TEX14Q8IWB6 1497 aa37.1■■■■□ 3.53
ARHGEF1-223ENST00000617585 CFAP43Q8NDM7 1665 aa37.09■■■■□ 3.53
ARHGEF1-223ENST00000617585 FHOD3Q2V2M9 1422 aa37.07■■■■□ 3.52
ARHGEF1-223ENST00000617585 MAGI3Q5TCQ9 1506 aa37.01■■■■□ 3.52
ARHGEF1-223ENST00000617585 NUP153P49790 1475 aaKnown RBP37.01■■■■□ 3.51
ARHGEF1-223ENST00000617585 RANGAP1P46060 587 aaPredicted RBP36.99■■■■□ 3.51
ARHGEF1-223ENST00000617585 KCNH8Q96L42 1107 aa36.98■■■■□ 3.51
ARHGEF1-223ENST00000617585 CD109Q6YHK3 1445 aa36.98■■■■□ 3.51
ARHGEF1-223ENST00000617585 COL17A1Q9UMD9 1497 aaPredicted RBP36.97■■■■□ 3.51
ARHGEF1-223ENST00000617585 UBTFP17480 764 aaKnown RBP36.95■■■■□ 3.51
ARHGEF1-223ENST00000617585 ARID3CA6NKF2 412 aa36.91■■■■□ 3.5
ARHGEF1-223ENST00000617585 ABCA9Q8IUA7 1624 aa36.9■■■■□ 3.5
ARHGEF1-223ENST00000617585 AEBP2Q6ZN18 517 aaPredicted RBP36.9■■■■□ 3.5
ARHGEF1-223ENST00000617585 ARHGAP35Q9NRY4 1499 aa36.84■■■■□ 3.49
ARHGEF1-223ENST00000617585 EHMT2Q96KQ7 1210 aa36.81■■■■□ 3.48
ARHGEF1-223ENST00000617585 FMN1Q68DA7 1419 aa36.76■■■■□ 3.48
ARHGEF1-223ENST00000617585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.76■■■■□ 3.48
ARHGEF1-223ENST00000617585 HNRNPUL2Q1KMD3 747 aaKnown RBP36.76■■■■□ 3.48
ARHGEF1-223ENST00000617585 ARAP3Q8WWN8 1544 aa36.72■■■■□ 3.47
ARHGEF1-223ENST00000617585 PHLDB1Q86UU1 1377 aa36.71■■■■□ 3.47
ARHGEF1-223ENST00000617585 PLEKHD1A6NEE1 506 aa36.71■■■■□ 3.47
ARHGEF1-223ENST00000617585 KDM4FA0A1W2PPD8 638 aa36.67■■■■□ 3.46
ARHGEF1-223ENST00000617585 HECW1Q76N89 1606 aa36.66■■■■□ 3.46
ARHGEF1-223ENST00000617585 NEO1Q92859 1461 aa36.63■■■■□ 3.45
ARHGEF1-223ENST00000617585 CDK13Q14004 1512 aaKnown RBP36.63■■■■□ 3.45
ARHGEF1-223ENST00000617585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.59■■■■□ 3.45
ARHGEF1-223ENST00000617585 TTC37Q6PGP7 1564 aa36.51■■■■□ 3.44
ARHGEF1-223ENST00000617585 LRRIQ1Q96JM4 1722 aa36.5■■■■□ 3.43
ARHGEF1-223ENST00000617585 ADGRL1O94910 1474 aa36.48■■■■□ 3.43
ARHGEF1-223ENST00000617585 CFAP74Q9C0B2 1584 aa36.46■■■■□ 3.43
ARHGEF1-223ENST00000617585 CDK11AQ9UQ88 783 aaPredicted RBP36.44■■■■□ 3.42
ARHGEF1-223ENST00000617585 CASKIN1Q8WXD9 1431 aa36.43■■■■□ 3.42
ARHGEF1-223ENST00000617585 ATP1B4Q9UN42 357 aaPredicted RBP36.43■■■■□ 3.42
ARHGEF1-223ENST00000617585 FRMPD1Q5SYB0 1578 aa36.41■■■■□ 3.42
ARHGEF1-223ENST00000617585 FANCAO15360 1455 aa36.41■■■■□ 3.42
ARHGEF1-223ENST00000617585 PCF11O94913 1555 aaKnown RBP36.4■■■■□ 3.42
ARHGEF1-223ENST00000617585 AKNAQ7Z591 1439 aa36.39■■■■□ 3.42
ARHGEF1-223ENST00000617585 CLIP1P30622 1438 aa36.38■■■■□ 3.41
ARHGEF1-223ENST00000617585 TROQ12816 1431 aaPredicted RBP36.37■■■■□ 3.41
ARHGEF1-223ENST00000617585 RAPGEF3O95398 923 aa36.37■■■■□ 3.41
ARHGEF1-223ENST00000617585 PLCH2O75038 1416 aa36.36■■■■□ 3.41
ARHGEF1-223ENST00000617585 RICTORQ6R327 1708 aa36.36■■■■□ 3.41
ARHGEF1-223ENST00000617585 CCDC18Q5T9S5 1454 aa36.34■■■■□ 3.41
ARHGEF1-223ENST00000617585 DENND4BO75064 1496 aaPredicted RBP36.32■■■■□ 3.41
ARHGEF1-223ENST00000617585 MYO5CQ9NQX4 1742 aa36.32■■■■□ 3.4
ARHGEF1-223ENST00000617585 KIF14Q15058 1648 aa36.32■■■■□ 3.4
ARHGEF1-223ENST00000617585 FYCO1Q9BQS8 1478 aa36.31■■■■□ 3.4
ARHGEF1-223ENST00000617585 ZMYM4Q5VZL5 1548 aa36.23■■■■□ 3.39
ARHGEF1-223ENST00000617585 ARHGEF40Q8TER5 1519 aa36.18■■■■□ 3.38
ARHGEF1-223ENST00000617585 EFCAB2Q5VUJ9 269 aa36.17■■■■□ 3.38
ARHGEF1-223ENST00000617585 SCAPERQ9BY12 1400 aa36.15■■■■□ 3.38
ARHGEF1-223ENST00000617585 MAGI2Q86UL8 1455 aa36.14■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms