RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 PRG4Q92954 1404 aaPredicted RBP38.64■■■■□ 3.78
NEDD4L-237ENST00000617539 JPH4Q96JJ6 628 aa38.61■■■■□ 3.77
NEDD4L-237ENST00000617539 KIAA0586Q9BVV6 1533 aa38.51■■■■□ 3.76
NEDD4L-237ENST00000617539 CARMIL1Q5VZK9 1371 aa38.46■■■■□ 3.75
NEDD4L-237ENST00000617539 ADCY10Q96PN6 1610 aa38.26■■■■□ 3.71
NEDD4L-237ENST00000617539 KIF13AQ9H1H9 1805 aa38.22■■■■□ 3.71
NEDD4L-237ENST00000617539 IQGAP2Q13576 1575 aa38.22■■■■□ 3.71
NEDD4L-237ENST00000617539 RAPGEF2Q9Y4G8 1499 aa38.17■■■■□ 3.7
NEDD4L-237ENST00000617539 MAPKBP1O60336 1514 aa38.1■■■■□ 3.69
NEDD4L-237ENST00000617539 CARMIL2Q6F5E8 1435 aa38.05■■■■□ 3.68
NEDD4L-237ENST00000617539 PTPRGP23470 1445 aa38.04■■■■□ 3.68
NEDD4L-237ENST00000617539 DISP1Q96F81 1524 aa38.04■■■■□ 3.68
NEDD4L-237ENST00000617539 TNIKQ9UKE5 1360 aa38.02■■■■□ 3.68
NEDD4L-237ENST00000617539 NPM1P06748 294 aaKnown RBP eCLIP38■■■■□ 3.67
NEDD4L-237ENST00000617539 ABCC10Q5T3U5 1492 aa38■■■■□ 3.67
NEDD4L-237ENST00000617539 UGGT2Q9NYU1 1516 aa38■■■■□ 3.67
NEDD4L-237ENST00000617539 DIP2BQ9P265 1576 aa37.97■■■■□ 3.67
NEDD4L-237ENST00000617539 CTTNBP2Q8WZ74 1663 aa37.95■■■■□ 3.66
NEDD4L-237ENST00000617539 TTBK1Q5TCY1 1321 aaPredicted RBP37.93■■■■□ 3.66
NEDD4L-237ENST00000617539 PRXQ9BXM0 1461 aa37.9■■■■□ 3.66
NEDD4L-237ENST00000617539 KIAA0556O60303 1618 aa37.9■■■■□ 3.66
NEDD4L-237ENST00000617539 FAM69CQ0P6D2 419 aa37.88■■■■□ 3.65
NEDD4L-237ENST00000617539 ABCC2Q92887 1545 aa37.87■■■■□ 3.65
NEDD4L-237ENST00000617539 UHRF1BP1LA0JNW5 1464 aa37.84■■■■□ 3.65
NEDD4L-237ENST00000617539 UACAQ9BZF9 1416 aa37.79■■■■□ 3.64
NEDD4L-237ENST00000617539 ASXL2Q76L83 1435 aa37.7■■■■□ 3.62
NEDD4L-237ENST00000617539 TSPOAP1O95153 1857 aa37.69■■■■□ 3.62
NEDD4L-237ENST00000617539 KDM5BQ9UGL1 1544 aa37.67■■■■□ 3.62
NEDD4L-237ENST00000617539 ZCCHC11Q5TAX3 1644 aaKnown RBP37.64■■■■□ 3.62
NEDD4L-237ENST00000617539 GOLGA3Q08378 1498 aa37.64■■■■□ 3.62
NEDD4L-237ENST00000617539 PLB1Q6P1J6 1458 aa37.64■■■■□ 3.62
NEDD4L-237ENST00000617539 CSRNP3Q8WYN3 585 aa37.59■■■■□ 3.61
NEDD4L-237ENST00000617539 GLI2P10070 1586 aa37.59■■■■□ 3.61
NEDD4L-237ENST00000617539 PPRC1Q5VV67 1664 aaKnown RBP37.54■■■■□ 3.6
NEDD4L-237ENST00000617539 ABCA8O94911 1581 aa37.53■■■■□ 3.6
NEDD4L-237ENST00000617539 KDM6BO15054 1643 aa37.52■■■■□ 3.6
NEDD4L-237ENST00000617539 EEA1Q15075 1411 aa37.51■■■■□ 3.59
NEDD4L-237ENST00000617539 EPRSP07814 1512 aaKnown RBP37.48■■■■□ 3.59
NEDD4L-237ENST00000617539 MAP3K4Q9Y6R4 1608 aa37.43■■■■□ 3.58
NEDD4L-237ENST00000617539 SAMD9Q5K651 1589 aa37.42■■■■□ 3.58
NEDD4L-237ENST00000617539 WDR7Q9Y4E6 1490 aa37.38■■■■□ 3.57
NEDD4L-237ENST00000617539 P3H3Q8IVL6 736 aa37.33■■■■□ 3.57
NEDD4L-237ENST00000617539 AEBP2Q6ZN18 517 aaPredicted RBP37.32■■■■□ 3.56
NEDD4L-237ENST00000617539 FAM9AQ8IZU1 332 aaPredicted RBP37.32■■■■□ 3.56
NEDD4L-237ENST00000617539 KIF21BO75037 1637 aa37.28■■■■□ 3.56
NEDD4L-237ENST00000617539 COL17A1Q9UMD9 1497 aaPredicted RBP37.2■■■■□ 3.55
NEDD4L-237ENST00000617539 CHIC1Q5VXU3 224 aa37.2■■■■□ 3.55
NEDD4L-237ENST00000617539 TEX14Q8IWB6 1497 aa37.19■■■■□ 3.54
NEDD4L-237ENST00000617539 ATP10BO94823 1461 aa37.18■■■■□ 3.54
NEDD4L-237ENST00000617539 CFAP43Q8NDM7 1665 aa37.18■■■■□ 3.54
NEDD4L-237ENST00000617539 RAPGEF6Q8TEU7 1601 aa37.18■■■■□ 3.54
NEDD4L-237ENST00000617539 ARID3CA6NKF2 412 aa37.13■■■■□ 3.53
NEDD4L-237ENST00000617539 FHOD3Q2V2M9 1422 aa37.11■■■■□ 3.53
NEDD4L-237ENST00000617539 KCNH8Q96L42 1107 aa37.11■■■■□ 3.53
NEDD4L-237ENST00000617539 RANGAP1P46060 587 aaPredicted RBP37.1■■■■□ 3.53
NEDD4L-237ENST00000617539 MAGI3Q5TCQ9 1506 aa37.08■■■■□ 3.53
NEDD4L-237ENST00000617539 CD109Q6YHK3 1445 aa37.08■■■■□ 3.53
NEDD4L-237ENST00000617539 NUP153P49790 1475 aaKnown RBP37.04■■■■□ 3.52
NEDD4L-237ENST00000617539 EFCAB5A4FU69 1503 aa37.04■■■■□ 3.52
NEDD4L-237ENST00000617539 KDM4FA0A1W2PPD8 638 aa36.99■■■■□ 3.51
NEDD4L-237ENST00000617539 ABCA9Q8IUA7 1624 aa36.96■■■■□ 3.51
NEDD4L-237ENST00000617539 EHMT2Q96KQ7 1210 aa36.91■■■■□ 3.5
NEDD4L-237ENST00000617539 UBTFP17480 764 aaKnown RBP36.83■■■■□ 3.49
NEDD4L-237ENST00000617539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.82■■■■□ 3.48
NEDD4L-237ENST00000617539 HNRNPUL2Q1KMD3 747 aaKnown RBP36.82■■■■□ 3.48
NEDD4L-237ENST00000617539 ADGRL1O94910 1474 aa36.8■■■■□ 3.48
NEDD4L-237ENST00000617539 ARAP3Q8WWN8 1544 aa36.8■■■■□ 3.48
NEDD4L-237ENST00000617539 ARHGAP35Q9NRY4 1499 aa36.78■■■■□ 3.48
NEDD4L-237ENST00000617539 CDK13Q14004 1512 aaKnown RBP36.72■■■■□ 3.47
NEDD4L-237ENST00000617539 NEO1Q92859 1461 aa36.68■■■■□ 3.46
NEDD4L-237ENST00000617539 PLEKHD1A6NEE1 506 aa36.66■■■■□ 3.46
NEDD4L-237ENST00000617539 PHLDB1Q86UU1 1377 aa36.66■■■■□ 3.46
NEDD4L-237ENST00000617539 FMN1Q68DA7 1419 aa36.65■■■■□ 3.46
NEDD4L-237ENST00000617539 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.64■■■■□ 3.461e-6■■□□□ 11.6
NEDD4L-237ENST00000617539 TTC37Q6PGP7 1564 aa36.63■■■■□ 3.45
NEDD4L-237ENST00000617539 HECW1Q76N89 1606 aa36.63■■■■□ 3.45
NEDD4L-237ENST00000617539 FRMPD1Q5SYB0 1578 aa36.61■■■■□ 3.45
NEDD4L-237ENST00000617539 LRRIQ1Q96JM4 1722 aa36.55■■■■□ 3.44
NEDD4L-237ENST00000617539 RAPGEF3O95398 923 aa36.54■■■■□ 3.44
NEDD4L-237ENST00000617539 CFAP74Q9C0B2 1584 aa36.49■■■■□ 3.43
NEDD4L-237ENST00000617539 FANCAO15360 1455 aa36.49■■■■□ 3.43
NEDD4L-237ENST00000617539 RICTORQ6R327 1708 aa36.48■■■■□ 3.43
NEDD4L-237ENST00000617539 ATP1B4Q9UN42 357 aaPredicted RBP36.47■■■■□ 3.43
NEDD4L-237ENST00000617539 AKNAQ7Z591 1439 aa36.45■■■■□ 3.43
NEDD4L-237ENST00000617539 KIF14Q15058 1648 aa36.41■■■■□ 3.42
NEDD4L-237ENST00000617539 PCF11O94913 1555 aaKnown RBP36.41■■■■□ 3.42
NEDD4L-237ENST00000617539 DENND4BO75064 1496 aaPredicted RBP36.4■■■■□ 3.42
NEDD4L-237ENST00000617539 PLCH2O75038 1416 aa36.36■■■■□ 3.41
NEDD4L-237ENST00000617539 MYO5CQ9NQX4 1742 aa36.36■■■■□ 3.41
NEDD4L-237ENST00000617539 ARHGEF40Q8TER5 1519 aa36.34■■■■□ 3.41
NEDD4L-237ENST00000617539 TROQ12816 1431 aaPredicted RBP36.34■■■■□ 3.41
NEDD4L-237ENST00000617539 CASKIN1Q8WXD9 1431 aa36.33■■■■□ 3.41
NEDD4L-237ENST00000617539 ZMYM4Q5VZL5 1548 aa36.31■■■■□ 3.4
NEDD4L-237ENST00000617539 CDK11AQ9UQ88 783 aaPredicted RBP36.31■■■■□ 3.4
NEDD4L-237ENST00000617539 ADAMTSL3P82987 1691 aa36.3■■■■□ 3.4
NEDD4L-237ENST00000617539 CLIP1P30622 1438 aa36.25■■■■□ 3.39
NEDD4L-237ENST00000617539 BCORL1Q5H9F3 1711 aa36.25■■■■□ 3.39
NEDD4L-237ENST00000617539 CCDC18Q5T9S5 1454 aa36.24■■■■□ 3.39
NEDD4L-237ENST00000617539 FYCO1Q9BQS8 1478 aa36.22■■■■□ 3.39
NEDD4L-237ENST00000617539 POGZQ7Z3K3 1410 aa36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms