RNA–Protein interactions for RNA: ENST00000615947.1

LINC00598-206, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 3,541 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-206ENST00000615947 CUL7Q14999 1698 aa8.78□□□□□ -1
LINC00598-206ENST00000615947 CUX2O14529 1486 aa8.78□□□□□ -1
LINC00598-206ENST00000615947 UBTFP17480 764 aaKnown RBP8.76□□□□□ -1.01
LINC00598-206ENST00000615947 SPINK5Q9NQ38 1064 aaPredicted RBP8.76□□□□□ -1.01
LINC00598-206ENST00000615947 LAMC3Q9Y6N6 1575 aa8.75□□□□□ -1.01
LINC00598-206ENST00000615947 ABCB7O75027 752 aa8.75□□□□□ -1.01
LINC00598-206ENST00000615947 SAMD9Q5K651 1589 aa8.73□□□□□ -1.01
LINC00598-206ENST00000615947 PRXQ9BXM0 1461 aa8.73□□□□□ -1.01
LINC00598-206ENST00000615947 THOC2Q8NI27 1593 aaKnown RBP8.73□□□□□ -1.01
LINC00598-206ENST00000615947 LRRIQ1Q96JM4 1722 aa8.72□□□□□ -1.01
LINC00598-206ENST00000615947 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.01
LINC00598-206ENST00000615947 CUX1P39880 1505 aa8.7□□□□□ -1.02
LINC00598-206ENST00000615947 TARBP1Q13395 1621 aaKnown RBP8.69□□□□□ -1.02
LINC00598-206ENST00000615947 CAPN15O75808 1086 aa8.69□□□□□ -1.02
LINC00598-206ENST00000615947 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
LINC00598-206ENST00000615947 DNAJC5BQ9UF47 199 aa8.68□□□□□ -1.02
LINC00598-206ENST00000615947 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.68□□□□□ -1.02
LINC00598-206ENST00000615947 CEP162Q5TB80 1403 aa8.65□□□□□ -1.02
LINC00598-206ENST00000615947 KLHL34Q8N239 644 aa8.65□□□□□ -1.02
LINC00598-206ENST00000615947 PBRM1Q86U86 1689 aa8.65□□□□□ -1.03
LINC00598-206ENST00000615947 TIMELESSQ9UNS1 1208 aa8.63□□□□□ -1.03
LINC00598-206ENST00000615947 ARHGEF11O15085 1522 aa8.63□□□□□ -1.03
LINC00598-206ENST00000615947 AQRO60306 1485 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC00598-206ENST00000615947 PODXL2Q9NZ53 605 aa8.62□□□□□ -1.03
LINC00598-206ENST00000615947 TNIKQ9UKE5 1360 aa8.62□□□□□ -1.03
LINC00598-206ENST00000615947 ZEB1P37275 1124 aaPredicted RBP8.6□□□□□ -1.03
LINC00598-206ENST00000615947 ADCY10Q96PN6 1610 aa8.6□□□□□ -1.03
LINC00598-206ENST00000615947 ABCA10Q8WWZ4 1543 aa8.6□□□□□ -1.03
LINC00598-206ENST00000615947 RAPGEF2Q9Y4G8 1499 aa8.59□□□□□ -1.03
LINC00598-206ENST00000615947 EFCAB5A4FU69 1503 aa8.59□□□□□ -1.03
LINC00598-206ENST00000615947 CEP164Q9UPV0 1460 aa8.57□□□□□ -1.04
LINC00598-206ENST00000615947 POLR1AO95602 1720 aaPredicted RBP8.57□□□□□ -1.04
LINC00598-206ENST00000615947 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
LINC00598-206ENST00000615947 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
LINC00598-206ENST00000615947 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
LINC00598-206ENST00000615947 WDR62O43379 1518 aa8.55□□□□□ -1.04
LINC00598-206ENST00000615947 HNRNPUL2Q1KMD3 747 aaKnown RBP8.54□□□□□ -1.04
LINC00598-206ENST00000615947 CCER1Q8TC90 406 aaPredicted RBP8.54□□□□□ -1.04
LINC00598-206ENST00000615947 ARXQ96QS3 562 aa8.53□□□□□ -1.04
LINC00598-206ENST00000615947 GCC2Q8IWJ2 1684 aa8.52□□□□□ -1.05
LINC00598-206ENST00000615947 CLIP1P30622 1438 aa8.51□□□□□ -1.05
LINC00598-206ENST00000615947 FKBP8Q14318 412 aa8.51□□□□□ -1.05
LINC00598-206ENST00000615947 ARAP1Q96P48 1450 aa8.5□□□□□ -1.05
LINC00598-206ENST00000615947 NESP48681 1621 aa8.5□□□□□ -1.05
LINC00598-206ENST00000615947 CROCC2H7BZ55 1655 aa8.5□□□□□ -1.05
LINC00598-206ENST00000615947 POLA2Q14181 598 aa8.49□□□□□ -1.05
LINC00598-206ENST00000615947 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.49□□□□□ -1.05
LINC00598-206ENST00000615947 SHROOM2Q13796 1616 aa8.49□□□□□ -1.05
LINC00598-206ENST00000615947 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
LINC00598-206ENST00000615947 CADPSQ9ULU8 1353 aa8.48□□□□□ -1.05
LINC00598-206ENST00000615947 P3H3Q8IVL6 736 aa8.48□□□□□ -1.05
LINC00598-206ENST00000615947 ADAMTS12P58397 1594 aa8.48□□□□□ -1.05
LINC00598-206ENST00000615947 CACNB1Q02641 598 aaPredicted RBP8.47□□□□□ -1.05
LINC00598-206ENST00000615947 CENPBP07199 599 aaPredicted RBP8.47□□□□□ -1.05
LINC00598-206ENST00000615947 RRBP1Q9P2E9 1410 aaKnown RBP8.45□□□□□ -1.06
LINC00598-206ENST00000615947 TIAM1Q13009 1591 aa8.44□□□□□ -1.06
LINC00598-206ENST00000615947 SNAPC4Q5SXM2 1469 aa8.43□□□□□ -1.06
LINC00598-206ENST00000615947 RAD54L2Q9Y4B4 1467 aa8.43□□□□□ -1.06
LINC00598-206ENST00000615947 IGF1RP08069 1367 aa8.43□□□□□ -1.06
LINC00598-206ENST00000615947 KIF27Q86VH2 1401 aa8.42□□□□□ -1.06
LINC00598-206ENST00000615947 ITGAEP38570 1179 aa8.42□□□□□ -1.06
LINC00598-206ENST00000615947 IQGAP2Q13576 1575 aa8.41□□□□□ -1.06
LINC00598-206ENST00000615947 UGGT2Q9NYU1 1516 aa8.41□□□□□ -1.06
LINC00598-206ENST00000615947 ATP1B4Q9UN42 357 aaPredicted RBP8.41□□□□□ -1.06
LINC00598-206ENST00000615947 VPS8Q8N3P4 1428 aa8.41□□□□□ -1.06
LINC00598-206ENST00000615947 RNF39Q9H2S5 420 aa8.4□□□□□ -1.06
LINC00598-206ENST00000615947 FGD5Q6ZNL6 1462 aa8.4□□□□□ -1.06
LINC00598-206ENST00000615947 TOPBP1Q92547 1522 aa8.4□□□□□ -1.07
LINC00598-206ENST00000615947 FANCD2Q9BXW9 1451 aa8.39□□□□□ -1.07
LINC00598-206ENST00000615947 BCORL1Q5H9F3 1711 aa8.38□□□□□ -1.07
LINC00598-206ENST00000615947 TCOF1Q13428 1488 aaKnown RBP8.38□□□□□ -1.07
LINC00598-206ENST00000615947 HECW1Q76N89 1606 aa8.38□□□□□ -1.07
LINC00598-206ENST00000615947 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
LINC00598-206ENST00000615947 FYCO1Q9BQS8 1478 aa8.37□□□□□ -1.07
LINC00598-206ENST00000615947 CARMIL1Q5VZK9 1371 aa8.37□□□□□ -1.07
LINC00598-206ENST00000615947 TDRD9Q8NDG6 1382 aaKnown RBP8.37□□□□□ -1.07
LINC00598-206ENST00000615947 URB2Q14146 1524 aaKnown RBP8.36□□□□□ -1.07
LINC00598-206ENST00000615947 ADGBQ8N7X0 1667 aa8.36□□□□□ -1.07
LINC00598-206ENST00000615947 AKNAQ7Z591 1439 aa8.35□□□□□ -1.07
LINC00598-206ENST00000615947 AMER1Q5JTC6 1135 aaPredicted RBP8.35□□□□□ -1.07
LINC00598-206ENST00000615947 GRIN2BQ13224 1484 aa8.34□□□□□ -1.07
LINC00598-206ENST00000615947 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
LINC00598-206ENST00000615947 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
LINC00598-206ENST00000615947 KDM5BQ9UGL1 1544 aa8.33□□□□□ -1.08
LINC00598-206ENST00000615947 PCF11O94913 1555 aaKnown RBP8.33□□□□□ -1.08
LINC00598-206ENST00000615947 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
LINC00598-206ENST00000615947 SAMD1Q6SPF0 538 aaPredicted RBP8.33□□□□□ -1.08
LINC00598-206ENST00000615947 POLA1P09884 1462 aaPredicted RBP8.32□□□□□ -1.08
LINC00598-206ENST00000615947 PDIA4P13667 645 aaKnown RBP8.32□□□□□ -1.08
LINC00598-206ENST00000615947 PKNOX2Q96KN3 472 aa8.32□□□□□ -1.08
LINC00598-206ENST00000615947 ANO8Q9HCE9 1232 aaPredicted RBP8.32□□□□□ -1.08
LINC00598-206ENST00000615947 ARID3CA6NKF2 412 aa8.31□□□□□ -1.08
LINC00598-206ENST00000615947 UBE2Q2Q8WVN8 375 aa8.31□□□□□ -1.08
LINC00598-206ENST00000615947 MAST1Q9Y2H9 1570 aa8.3□□□□□ -1.08
LINC00598-206ENST00000615947 KDM5DQ9BY66 1539 aa8.3□□□□□ -1.08
LINC00598-206ENST00000615947 LAMC1P11047 1609 aa8.28□□□□□ -1.08
LINC00598-206ENST00000615947 PDE4CQ08493 712 aa8.28□□□□□ -1.08
LINC00598-206ENST00000615947 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
LINC00598-206ENST00000615947 DIEXFQ68CQ4 756 aaKnown RBP8.28□□□□□ -1.08
LINC00598-206ENST00000615947 OSCARQ8IYS5 282 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms