RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 MAGI1Q96QZ7 1491 aaPredicted RBP20.33■□□□□ 0.85
FOXN3-219ENST00000615335 FBLN2P98095 1184 aa20.29■□□□□ 0.84
FOXN3-219ENST00000615335 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
FOXN3-219ENST00000615335 TNIKQ9UKE5 1360 aa20.28■□□□□ 0.84
FOXN3-219ENST00000615335 SYNJ2O15056 1496 aa20.27■□□□□ 0.83
FOXN3-219ENST00000615335 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
FOXN3-219ENST00000615335 RANGAP1P46060 587 aaPredicted RBP20.21■□□□□ 0.83
FOXN3-219ENST00000615335 CTTNBP2Q8WZ74 1663 aa20.15■□□□□ 0.82
FOXN3-219ENST00000615335 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
FOXN3-219ENST00000615335 CHD1O14646 1710 aa20.15■□□□□ 0.82
FOXN3-219ENST00000615335 ZEB1P37275 1124 aaPredicted RBP20.11■□□□□ 0.81
FOXN3-219ENST00000615335 CEP170Q5SW79 1584 aa20.09■□□□□ 0.81
FOXN3-219ENST00000615335 CLIP1P30622 1438 aa20.09■□□□□ 0.81
FOXN3-219ENST00000615335 NUP160Q12769 1436 aa20.07■□□□□ 0.8
FOXN3-219ENST00000615335 KIAA0586Q9BVV6 1533 aa20.06■□□□□ 0.8
FOXN3-219ENST00000615335 IQGAP2Q13576 1575 aa20.05■□□□□ 0.8
FOXN3-219ENST00000615335 P3H3Q8IVL6 736 aa19.98■□□□□ 0.79
FOXN3-219ENST00000615335 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
FOXN3-219ENST00000615335 JPH4Q96JJ6 628 aa19.95■□□□□ 0.78
FOXN3-219ENST00000615335 OSCARQ8IYS5 282 aa19.94■□□□□ 0.78
FOXN3-219ENST00000615335 EFCAB5A4FU69 1503 aa19.94■□□□□ 0.78
FOXN3-219ENST00000615335 UGGT2Q9NYU1 1516 aa19.93■□□□□ 0.78
FOXN3-219ENST00000615335 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
FOXN3-219ENST00000615335 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
FOXN3-219ENST00000615335 SAMD9Q5K651 1589 aa19.91■□□□□ 0.78
FOXN3-219ENST00000615335 FHOD3Q2V2M9 1422 aa19.89■□□□□ 0.77
FOXN3-219ENST00000615335 CLASP1Q7Z460 1538 aa19.89■□□□□ 0.77
FOXN3-219ENST00000615335 DISP1Q96F81 1524 aa19.86■□□□□ 0.77
FOXN3-219ENST00000615335 CARMIL2Q6F5E8 1435 aa19.85■□□□□ 0.77
FOXN3-219ENST00000615335 VPS8Q8N3P4 1428 aa19.85■□□□□ 0.77
FOXN3-219ENST00000615335 KIAA0556O60303 1618 aa19.84■□□□□ 0.77
FOXN3-219ENST00000615335 PRG4Q92954 1404 aaPredicted RBP19.84■□□□□ 0.77
FOXN3-219ENST00000615335 SHROOM2Q13796 1616 aa19.83■□□□□ 0.77
FOXN3-219ENST00000615335 FMN1Q68DA7 1419 aa19.78■□□□□ 0.76
FOXN3-219ENST00000615335 ATP1B4Q9UN42 357 aaPredicted RBP19.75■□□□□ 0.75
FOXN3-219ENST00000615335 ERCC6L2Q5T890 1561 aa19.74■□□□□ 0.75
FOXN3-219ENST00000615335 APLP2Q06481 763 aa19.72■□□□□ 0.75
FOXN3-219ENST00000615335 PCF11O94913 1555 aaKnown RBP19.7■□□□□ 0.74
FOXN3-219ENST00000615335 PTPRGP23470 1445 aa19.69■□□□□ 0.74
FOXN3-219ENST00000615335 CASKIN1Q8WXD9 1431 aa19.69■□□□□ 0.74
FOXN3-219ENST00000615335 CENPBP07199 599 aaPredicted RBP19.68■□□□□ 0.74
FOXN3-219ENST00000615335 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
FOXN3-219ENST00000615335 GTF3C3Q9Y5Q9 886 aa19.68■□□□□ 0.74
FOXN3-219ENST00000615335 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
FOXN3-219ENST00000615335 PLB1Q6P1J6 1458 aa19.63■□□□□ 0.73
FOXN3-219ENST00000615335 RAPGEF6Q8TEU7 1601 aa19.62■□□□□ 0.73
FOXN3-219ENST00000615335 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
FOXN3-219ENST00000615335 HECW1Q76N89 1606 aa19.6■□□□□ 0.73
FOXN3-219ENST00000615335 ABCA8O94911 1581 aa19.57■□□□□ 0.72
FOXN3-219ENST00000615335 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
FOXN3-219ENST00000615335 LRRIQ1Q96JM4 1722 aa19.56■□□□□ 0.72
FOXN3-219ENST00000615335 UACAQ9BZF9 1416 aa19.56■□□□□ 0.72
FOXN3-219ENST00000615335 TIAM1Q13009 1591 aa19.55■□□□□ 0.72
FOXN3-219ENST00000615335 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
FOXN3-219ENST00000615335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.54■□□□□ 0.72
FOXN3-219ENST00000615335 HNRNPUL2Q1KMD3 747 aaKnown RBP19.54■□□□□ 0.72
FOXN3-219ENST00000615335 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
FOXN3-219ENST00000615335 EPRSP07814 1512 aaKnown RBP19.54■□□□□ 0.72
FOXN3-219ENST00000615335 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
FOXN3-219ENST00000615335 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
FOXN3-219ENST00000615335 CFAP43Q8NDM7 1665 aa19.52■□□□□ 0.72
FOXN3-219ENST00000615335 CDK13Q14004 1512 aaKnown RBP19.51■□□□□ 0.71
FOXN3-219ENST00000615335 BCL11AQ9H165 835 aa19.51■□□□□ 0.71
FOXN3-219ENST00000615335 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
FOXN3-219ENST00000615335 RIMBP3BA6NNM3 1639 aa19.5■□□□□ 0.71
FOXN3-219ENST00000615335 RIMBP3Q9UFD9 1639 aa19.5■□□□□ 0.71
FOXN3-219ENST00000615335 ABCC2Q92887 1545 aa19.49■□□□□ 0.71
FOXN3-219ENST00000615335 LRRC9Q6ZRR7 1453 aa19.47■□□□□ 0.71
FOXN3-219ENST00000615335 CCER1Q8TC90 406 aaPredicted RBP19.46■□□□□ 0.71
FOXN3-219ENST00000615335 MTUS2Q5JR59 1369 aa19.46■□□□□ 0.71
FOXN3-219ENST00000615335 ATP10BO94823 1461 aa19.45■□□□□ 0.7
FOXN3-219ENST00000615335 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
FOXN3-219ENST00000615335 UHRF1BP1LA0JNW5 1464 aa19.45■□□□□ 0.7
FOXN3-219ENST00000615335 CDK11AQ9UQ88 783 aaPredicted RBP19.44■□□□□ 0.7
FOXN3-219ENST00000615335 ADCY10Q96PN6 1610 aa19.43■□□□□ 0.7
FOXN3-219ENST00000615335 MAGI3Q5TCQ9 1506 aa19.4■□□□□ 0.7
FOXN3-219ENST00000615335 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
FOXN3-219ENST00000615335 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
FOXN3-219ENST00000615335 KDM5BQ9UGL1 1544 aa19.38■□□□□ 0.69
FOXN3-219ENST00000615335 ZCCHC11Q5TAX3 1644 aaKnown RBP19.37■□□□□ 0.69
FOXN3-219ENST00000615335 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
FOXN3-219ENST00000615335 TROQ12816 1431 aaPredicted RBP19.33■□□□□ 0.69
FOXN3-219ENST00000615335 SUPT6HQ7KZ85 1726 aaKnown RBP19.33■□□□□ 0.68
FOXN3-219ENST00000615335 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
FOXN3-219ENST00000615335 PHLDB1Q86UU1 1377 aa19.28■□□□□ 0.68
FOXN3-219ENST00000615335 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
FOXN3-219ENST00000615335 KIF14Q15058 1648 aa19.26■□□□□ 0.67
FOXN3-219ENST00000615335 DNAJC5Q9H3Z4 198 aa19.25■□□□□ 0.67
FOXN3-219ENST00000615335 ASXL2Q76L83 1435 aa19.24■□□□□ 0.67
FOXN3-219ENST00000615335 WDR7Q9Y4E6 1490 aa19.22■□□□□ 0.67
FOXN3-219ENST00000615335 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
FOXN3-219ENST00000615335 MYOM3Q5VTT5 1437 aa19.2■□□□□ 0.66
FOXN3-219ENST00000615335 PRKCSHP14314 528 aaPredicted RBP19.2■□□□□ 0.66
FOXN3-219ENST00000615335 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
FOXN3-219ENST00000615335 ANP32EQ9BTT0 268 aa19.19■□□□□ 0.66
FOXN3-219ENST00000615335 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
FOXN3-219ENST00000615335 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
FOXN3-219ENST00000615335 FGD6Q6ZV73 1430 aa19.17■□□□□ 0.66
FOXN3-219ENST00000615335 FAM50AQ14320 339 aaKnown RBP19.16■□□□□ 0.66
FOXN3-219ENST00000615335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms