RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 PRG4Q92954 1404 aaPredicted RBP39.23■■■■□ 3.87
FAM228B-208ENST00000613899 JPH4Q96JJ6 628 aa39.2■■■■□ 3.87
FAM228B-208ENST00000613899 KIAA0586Q9BVV6 1533 aa39.14■■■■□ 3.86
FAM228B-208ENST00000613899 CARMIL1Q5VZK9 1371 aa39.11■■■■□ 3.85
FAM228B-208ENST00000613899 IQGAP2Q13576 1575 aa38.87■■■■□ 3.81
FAM228B-208ENST00000613899 RAPGEF2Q9Y4G8 1499 aa38.85■■■■□ 3.81
FAM228B-208ENST00000613899 ADCY10Q96PN6 1610 aa38.77■■■■□ 3.8
FAM228B-208ENST00000613899 CARMIL2Q6F5E8 1435 aa38.76■■■■□ 3.8
FAM228B-208ENST00000613899 NPM1P06748 294 aaKnown RBP eCLIP38.69■■■■□ 3.78
FAM228B-208ENST00000613899 MAPKBP1O60336 1514 aa38.68■■■■□ 3.78
FAM228B-208ENST00000613899 KIF13AQ9H1H9 1805 aa38.68■■■■□ 3.78
FAM228B-208ENST00000613899 PTPRGP23470 1445 aa38.67■■■■□ 3.78
FAM228B-208ENST00000613899 TNIKQ9UKE5 1360 aa38.66■■■■□ 3.78
FAM228B-208ENST00000613899 UGGT2Q9NYU1 1516 aa38.61■■■■□ 3.77
FAM228B-208ENST00000613899 DISP1Q96F81 1524 aa38.59■■■■□ 3.77
FAM228B-208ENST00000613899 CTTNBP2Q8WZ74 1663 aa38.59■■■■□ 3.77
FAM228B-208ENST00000613899 ABCC10Q5T3U5 1492 aa38.55■■■■□ 3.76
FAM228B-208ENST00000613899 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
FAM228B-208ENST00000613899 TTBK1Q5TCY1 1321 aaPredicted RBP38.51■■■■□ 3.76
FAM228B-208ENST00000613899 KIAA0556O60303 1618 aa38.51■■■■□ 3.76
FAM228B-208ENST00000613899 DIP2BQ9P265 1576 aa38.5■■■■□ 3.75
FAM228B-208ENST00000613899 ABCC2Q92887 1545 aa38.46■■■■□ 3.75
FAM228B-208ENST00000613899 UHRF1BP1LA0JNW5 1464 aa38.44■■■■□ 3.74
FAM228B-208ENST00000613899 FAM69CQ0P6D2 419 aa38.43■■■■□ 3.74
FAM228B-208ENST00000613899 UACAQ9BZF9 1416 aa38.41■■■■□ 3.74
FAM228B-208ENST00000613899 GOLGA3Q08378 1498 aa38.35■■■■□ 3.73
FAM228B-208ENST00000613899 EEA1Q15075 1411 aa38.31■■■■□ 3.72
FAM228B-208ENST00000613899 CSRNP3Q8WYN3 585 aa38.28■■■■□ 3.72
FAM228B-208ENST00000613899 PLB1Q6P1J6 1458 aa38.27■■■■□ 3.72
FAM228B-208ENST00000613899 ASXL2Q76L83 1435 aa38.26■■■■□ 3.72
FAM228B-208ENST00000613899 KDM5BQ9UGL1 1544 aa38.26■■■■□ 3.72
FAM228B-208ENST00000613899 ZCCHC11Q5TAX3 1644 aaKnown RBP38.2■■■■□ 3.7
FAM228B-208ENST00000613899 TSPOAP1O95153 1857 aa38.18■■■■□ 3.7
FAM228B-208ENST00000613899 GLI2P10070 1586 aa38.15■■■■□ 3.7
FAM228B-208ENST00000613899 ABCA8O94911 1581 aa38.1■■■■□ 3.69
FAM228B-208ENST00000613899 KDM6BO15054 1643 aa38.07■■■■□ 3.68
FAM228B-208ENST00000613899 EPRSP07814 1512 aaKnown RBP38.04■■■■□ 3.68
FAM228B-208ENST00000613899 SAMD9Q5K651 1589 aa38.02■■■■□ 3.68
FAM228B-208ENST00000613899 PPRC1Q5VV67 1664 aaKnown RBP37.99■■■■□ 3.67
FAM228B-208ENST00000613899 WDR7Q9Y4E6 1490 aa37.99■■■■□ 3.67
FAM228B-208ENST00000613899 KIF21BO75037 1637 aa37.98■■■■□ 3.67
FAM228B-208ENST00000613899 FAM9AQ8IZU1 332 aaPredicted RBP37.98■■■■□ 3.67
FAM228B-208ENST00000613899 MAP3K4Q9Y6R4 1608 aa37.97■■■■□ 3.67
FAM228B-208ENST00000613899 P3H3Q8IVL6 736 aa37.9■■■■□ 3.66
FAM228B-208ENST00000613899 CHIC1Q5VXU3 224 aa37.89■■■■□ 3.66
FAM228B-208ENST00000613899 AEBP2Q6ZN18 517 aaPredicted RBP37.87■■■■□ 3.65
FAM228B-208ENST00000613899 TEX14Q8IWB6 1497 aa37.84■■■■□ 3.65
FAM228B-208ENST00000613899 RAPGEF6Q8TEU7 1601 aa37.79■■■■□ 3.64
FAM228B-208ENST00000613899 CFAP43Q8NDM7 1665 aa37.78■■■■□ 3.64
FAM228B-208ENST00000613899 EFCAB5A4FU69 1503 aa37.75■■■■□ 3.63
FAM228B-208ENST00000613899 ATP10BO94823 1461 aa37.73■■■■□ 3.63
FAM228B-208ENST00000613899 RANGAP1P46060 587 aaPredicted RBP37.72■■■■□ 3.63
FAM228B-208ENST00000613899 FHOD3Q2V2M9 1422 aa37.71■■■■□ 3.63
FAM228B-208ENST00000613899 KCNH8Q96L42 1107 aa37.68■■■■□ 3.62
FAM228B-208ENST00000613899 ARID3CA6NKF2 412 aa37.67■■■■□ 3.62
FAM228B-208ENST00000613899 CD109Q6YHK3 1445 aa37.67■■■■□ 3.62
FAM228B-208ENST00000613899 MAGI3Q5TCQ9 1506 aa37.66■■■■□ 3.62
FAM228B-208ENST00000613899 NUP153P49790 1475 aaKnown RBP37.62■■■■□ 3.61
FAM228B-208ENST00000613899 COL17A1Q9UMD9 1497 aaPredicted RBP37.61■■■■□ 3.61
FAM228B-208ENST00000613899 UBTFP17480 764 aaKnown RBP37.57■■■■□ 3.6
FAM228B-208ENST00000613899 ABCA9Q8IUA7 1624 aa37.54■■■■□ 3.6
FAM228B-208ENST00000613899 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.51■■■■□ 3.6
FAM228B-208ENST00000613899 HNRNPUL2Q1KMD3 747 aaKnown RBP37.51■■■■□ 3.6
FAM228B-208ENST00000613899 EHMT2Q96KQ7 1210 aa37.5■■■■□ 3.59
FAM228B-208ENST00000613899 ARHGAP35Q9NRY4 1499 aa37.39■■■■□ 3.58
FAM228B-208ENST00000613899 FMN1Q68DA7 1419 aa37.38■■■■□ 3.57
FAM228B-208ENST00000613899 KDM4FA0A1W2PPD8 638 aa37.37■■■■□ 3.57
FAM228B-208ENST00000613899 ARAP3Q8WWN8 1544 aa37.36■■■■□ 3.57
FAM228B-208ENST00000613899 PLEKHD1A6NEE1 506 aa37.34■■■■□ 3.57
FAM228B-208ENST00000613899 PHLDB1Q86UU1 1377 aa37.33■■■■□ 3.57
FAM228B-208ENST00000613899 HECW1Q76N89 1606 aa37.32■■■■□ 3.56
FAM228B-208ENST00000613899 NEO1Q92859 1461 aa37.29■■■■□ 3.56
FAM228B-208ENST00000613899 CDK13Q14004 1512 aaKnown RBP37.28■■■■□ 3.56
FAM228B-208ENST00000613899 ADGRL1O94910 1474 aa37.27■■■■□ 3.56
FAM228B-208ENST00000613899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.2■■■■□ 3.55
FAM228B-208ENST00000613899 TTC37Q6PGP7 1564 aa37.17■■■■□ 3.54
FAM228B-208ENST00000613899 CFAP74Q9C0B2 1584 aa37.17■■■■□ 3.54
FAM228B-208ENST00000613899 ATP1B4Q9UN42 357 aaPredicted RBP37.14■■■■□ 3.54
FAM228B-208ENST00000613899 FANCAO15360 1455 aa37.09■■■■□ 3.53
FAM228B-208ENST00000613899 FRMPD1Q5SYB0 1578 aa37.08■■■■□ 3.53
FAM228B-208ENST00000613899 CDK11AQ9UQ88 783 aaPredicted RBP37.07■■■■□ 3.52
FAM228B-208ENST00000613899 RAPGEF3O95398 923 aa37.05■■■■□ 3.52
FAM228B-208ENST00000613899 LRRIQ1Q96JM4 1722 aa37.04■■■■□ 3.52
FAM228B-208ENST00000613899 AKNAQ7Z591 1439 aa37.03■■■■□ 3.52
FAM228B-208ENST00000613899 PCF11O94913 1555 aaKnown RBP37.02■■■■□ 3.52
FAM228B-208ENST00000613899 DENND4BO75064 1496 aaPredicted RBP37.01■■■■□ 3.51
FAM228B-208ENST00000613899 KIF14Q15058 1648 aa37■■■■□ 3.51
FAM228B-208ENST00000613899 RICTORQ6R327 1708 aa36.99■■■■□ 3.51
FAM228B-208ENST00000613899 CASKIN1Q8WXD9 1431 aa36.99■■■■□ 3.51
FAM228B-208ENST00000613899 TROQ12816 1431 aaPredicted RBP36.98■■■■□ 3.51
FAM228B-208ENST00000613899 MYO5CQ9NQX4 1742 aa36.97■■■■□ 3.51
FAM228B-208ENST00000613899 CCDC18Q5T9S5 1454 aa36.97■■■■□ 3.51
FAM228B-208ENST00000613899 PLCH2O75038 1416 aa36.96■■■■□ 3.51
FAM228B-208ENST00000613899 CLIP1P30622 1438 aa36.96■■■■□ 3.51
FAM228B-208ENST00000613899 ARHGEF40Q8TER5 1519 aa36.9■■■■□ 3.5
FAM228B-208ENST00000613899 FYCO1Q9BQS8 1478 aa36.9■■■■□ 3.5
FAM228B-208ENST00000613899 ZMYM4Q5VZL5 1548 aa36.88■■■■□ 3.49
FAM228B-208ENST00000613899 POGZQ7Z3K3 1410 aa36.8■■■■□ 3.48
FAM228B-208ENST00000613899 EFCAB2Q5VUJ9 269 aa36.8■■■■□ 3.48
FAM228B-208ENST00000613899 SCAPERQ9BY12 1400 aa36.79■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms