RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 IGF1RP08069 1367 aa10.89□□□□□ -0.67
PPARGC1A-217ENST00000613098 MRC2Q9UBG0 1479 aa10.88□□□□□ -0.67
PPARGC1A-217ENST00000613098 RAB3GAP2Q9H2M9 1393 aa10.87□□□□□ -0.67
PPARGC1A-217ENST00000613098 TIAM1Q13009 1591 aa10.87□□□□□ -0.67
PPARGC1A-217ENST00000613098 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
PPARGC1A-217ENST00000613098 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
PPARGC1A-217ENST00000613098 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
PPARGC1A-217ENST00000613098 MAP3K1Q13233 1512 aa10.86□□□□□ -0.67
PPARGC1A-217ENST00000613098 PDS5BQ9NTI5 1447 aa10.86□□□□□ -0.67
PPARGC1A-217ENST00000613098 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
PPARGC1A-217ENST00000613098 LRRC9Q6ZRR7 1453 aa10.83□□□□□ -0.68
PPARGC1A-217ENST00000613098 MYT1Q01538 1121 aa10.81□□□□□ -0.68
PPARGC1A-217ENST00000613098 ITGAEP38570 1179 aa10.8□□□□□ -0.68
PPARGC1A-217ENST00000613098 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
PPARGC1A-217ENST00000613098 SETD5Q9C0A6 1442 aa10.79□□□□□ -0.68
PPARGC1A-217ENST00000613098 SIN3AQ96ST3 1273 aa10.78□□□□□ -0.68
PPARGC1A-217ENST00000613098 CFAP43Q8NDM7 1665 aa10.78□□□□□ -0.68
PPARGC1A-217ENST00000613098 CARMIL1Q5VZK9 1371 aa10.78□□□□□ -0.68
PPARGC1A-217ENST00000613098 FGD5Q6ZNL6 1462 aa10.78□□□□□ -0.68
PPARGC1A-217ENST00000613098 PCF11O94913 1555 aaKnown RBP10.77□□□□□ -0.69
PPARGC1A-217ENST00000613098 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
PPARGC1A-217ENST00000613098 CADPSQ9ULU8 1353 aa10.74□□□□□ -0.69
PPARGC1A-217ENST00000613098 DDX10Q13206 875 aaKnown RBP10.7□□□□□ -0.7
PPARGC1A-217ENST00000613098 PTPRKQ15262 1439 aa10.7□□□□□ -0.7
PPARGC1A-217ENST00000613098 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
PPARGC1A-217ENST00000613098 KDM5BQ9UGL1 1544 aa10.69□□□□□ -0.7
PPARGC1A-217ENST00000613098 FHAD1B1AJZ9 1412 aa10.69□□□□□ -0.7
PPARGC1A-217ENST00000613098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.69□□□□□ -0.7
PPARGC1A-217ENST00000613098 RAD54L2Q9Y4B4 1467 aa10.68□□□□□ -0.7
PPARGC1A-217ENST00000613098 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
PPARGC1A-217ENST00000613098 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
PPARGC1A-217ENST00000613098 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
PPARGC1A-217ENST00000613098 SNAPC4Q5SXM2 1469 aa10.67□□□□□ -0.7
PPARGC1A-217ENST00000613098 FYCO1Q9BQS8 1478 aa10.67□□□□□ -0.7
PPARGC1A-217ENST00000613098 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
PPARGC1A-217ENST00000613098 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.76e-7■■■□□ 15.2
PPARGC1A-217ENST00000613098 ABCA10Q8WWZ4 1543 aa10.66□□□□□ -0.7
PPARGC1A-217ENST00000613098 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
PPARGC1A-217ENST00000613098 NESP48681 1621 aa10.66□□□□□ -0.7
PPARGC1A-217ENST00000613098 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
PPARGC1A-217ENST00000613098 ARHGEF11O15085 1522 aa10.65□□□□□ -0.7
PPARGC1A-217ENST00000613098 POLA1P09884 1462 aaPredicted RBP10.64□□□□□ -0.71
PPARGC1A-217ENST00000613098 FANCD2Q9BXW9 1451 aa10.64□□□□□ -0.71
PPARGC1A-217ENST00000613098 EFCAB5A4FU69 1503 aa10.63□□□□□ -0.71
PPARGC1A-217ENST00000613098 FGD6Q6ZV73 1430 aa10.63□□□□□ -0.71
PPARGC1A-217ENST00000613098 DENND4BO75064 1496 aaPredicted RBP10.63□□□□□ -0.71
PPARGC1A-217ENST00000613098 DNMBPQ6XZF7 1577 aa10.62□□□□□ -0.71
PPARGC1A-217ENST00000613098 TOPBP1Q92547 1522 aa10.62□□□□□ -0.71
PPARGC1A-217ENST00000613098 FKBP8Q14318 412 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 BCANQ96GW7 911 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 HFM1A2PYH4 1435 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 CTTNBP2Q8WZ74 1663 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 CCER2I3L3R5 266 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 CLASP1Q7Z460 1538 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 PTPN23Q9H3S7 1636 aa10.61□□□□□ -0.71
PPARGC1A-217ENST00000613098 SAMD9Q5K651 1589 aa10.59□□□□□ -0.71
PPARGC1A-217ENST00000613098 NAIPQ13075 1403 aa10.59□□□□□ -0.71
PPARGC1A-217ENST00000613098 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
PPARGC1A-217ENST00000613098 CUL7Q14999 1698 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 IFT140Q96RY7 1462 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 MAGI3Q5TCQ9 1506 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 TRIM52Q96A61 297 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 ANP32EQ9BTT0 268 aa10.58□□□□□ -0.72
PPARGC1A-217ENST00000613098 GRIN2BQ13224 1484 aa10.57□□□□□ -0.72
PPARGC1A-217ENST00000613098 NCOA2Q15596 1464 aa10.55□□□□□ -0.72
PPARGC1A-217ENST00000613098 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
PPARGC1A-217ENST00000613098 FMN1Q68DA7 1419 aa10.54□□□□□ -0.72
PPARGC1A-217ENST00000613098 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
PPARGC1A-217ENST00000613098 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
PPARGC1A-217ENST00000613098 KDM6BO15054 1643 aa10.54□□□□□ -0.72
PPARGC1A-217ENST00000613098 MYOM3Q5VTT5 1437 aa10.53□□□□□ -0.72
PPARGC1A-217ENST00000613098 OSCARQ8IYS5 282 aa10.53□□□□□ -0.72
PPARGC1A-217ENST00000613098 RBM19Q9Y4C8 960 aaKnown RBP10.53□□□□□ -0.72
PPARGC1A-217ENST00000613098 UGGT2Q9NYU1 1516 aa10.52□□□□□ -0.72
PPARGC1A-217ENST00000613098 ANP32CO43423 234 aa10.51□□□□□ -0.73
PPARGC1A-217ENST00000613098 WASHC2AQ641Q2 1341 aa10.51□□□□□ -0.73
PPARGC1A-217ENST00000613098 TONSLQ96HA7 1378 aa10.51□□□□□ -0.73
PPARGC1A-217ENST00000613098 TCOF1Q13428 1488 aaKnown RBP10.49□□□□□ -0.73
PPARGC1A-217ENST00000613098 MSH5O43196 834 aa10.49□□□□□ -0.73
PPARGC1A-217ENST00000613098 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
PPARGC1A-217ENST00000613098 CCDC184Q52MB2 194 aa10.49□□□□□ -0.73
PPARGC1A-217ENST00000613098 TDRD9Q8NDG6 1382 aaKnown RBP10.49□□□□□ -0.73
PPARGC1A-217ENST00000613098 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
PPARGC1A-217ENST00000613098 CHD1O14646 1710 aa10.48□□□□□ -0.73
PPARGC1A-217ENST00000613098 SUPT6HQ7KZ85 1726 aaKnown RBP10.48□□□□□ -0.73
PPARGC1A-217ENST00000613098 GCC2Q8IWJ2 1684 aa10.48□□□□□ -0.73
PPARGC1A-217ENST00000613098 EHBP1L1Q8N3D4 1523 aa10.47□□□□□ -0.73
PPARGC1A-217ENST00000613098 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
PPARGC1A-217ENST00000613098 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
PPARGC1A-217ENST00000613098 ERCC6L2Q5T890 1561 aa10.47□□□□□ -0.73
PPARGC1A-217ENST00000613098 GAPVD1Q14C86 1478 aa10.45□□□□□ -0.74
PPARGC1A-217ENST00000613098 HSPA5P11021 654 aaKnown RBP10.45□□□□□ -0.74
PPARGC1A-217ENST00000613098 RRP7BPQ9NSQ0 103 aa10.43□□□□□ -0.74
PPARGC1A-217ENST00000613098 AKNAQ7Z591 1439 aa10.43□□□□□ -0.74
PPARGC1A-217ENST00000613098 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
PPARGC1A-217ENST00000613098 NCOA1Q15788 1441 aa10.41□□□□□ -0.74
PPARGC1A-217ENST00000613098 SPATA31E1Q6ZUB1 1445 aa10.41□□□□□ -0.74
PPARGC1A-217ENST00000613098 SHROOM2Q13796 1616 aa10.41□□□□□ -0.74
PPARGC1A-217ENST00000613098 CHIC2Q9UKJ5 165 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms