RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 KDM6BO15054 1643 aa18.92■□□□□ 0.62
SSX3-204ENST00000612497 JPH4Q96JJ6 628 aa18.91■□□□□ 0.62
SSX3-204ENST00000612497 WRNQ14191 1432 aaPredicted RBP eCLIP18.91■□□□□ 0.62
SSX3-204ENST00000612497 DIP2BQ9P265 1576 aa18.9■□□□□ 0.62
SSX3-204ENST00000612497 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
SSX3-204ENST00000612497 MAPKBP1O60336 1514 aa18.89■□□□□ 0.61
SSX3-204ENST00000612497 ERICH3Q5RHP9 1530 aa18.83■□□□□ 0.6
SSX3-204ENST00000612497 ADCY10Q96PN6 1610 aa18.82■□□□□ 0.6
SSX3-204ENST00000612497 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
SSX3-204ENST00000612497 TOP2BQ02880 1626 aa18.75■□□□□ 0.59
SSX3-204ENST00000612497 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
SSX3-204ENST00000612497 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
SSX3-204ENST00000612497 HECW2Q9P2P5 1572 aa18.66■□□□□ 0.58
SSX3-204ENST00000612497 TTBK1Q5TCY1 1321 aaPredicted RBP18.62■□□□□ 0.57
SSX3-204ENST00000612497 KIAA0586Q9BVV6 1533 aa18.6■□□□□ 0.57
SSX3-204ENST00000612497 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
SSX3-204ENST00000612497 PPRC1Q5VV67 1664 aaKnown RBP18.6■□□□□ 0.57
SSX3-204ENST00000612497 PTPRGP23470 1445 aa18.59■□□□□ 0.57
SSX3-204ENST00000612497 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
SSX3-204ENST00000612497 GLI2P10070 1586 aa18.55■□□□□ 0.56
SSX3-204ENST00000612497 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
SSX3-204ENST00000612497 ABCC2Q92887 1545 aa18.54■□□□□ 0.56
SSX3-204ENST00000612497 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
SSX3-204ENST00000612497 COL17A1Q9UMD9 1497 aaPredicted RBP18.52■□□□□ 0.56
SSX3-204ENST00000612497 CUL7Q14999 1698 aa18.5■□□□□ 0.55
SSX3-204ENST00000612497 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
SSX3-204ENST00000612497 TNIKQ9UKE5 1360 aa18.48■□□□□ 0.55
SSX3-204ENST00000612497 CARMIL2Q6F5E8 1435 aa18.47■□□□□ 0.55
SSX3-204ENST00000612497 IGF1RP08069 1367 aa18.46■□□□□ 0.55
SSX3-204ENST00000612497 TEX14Q8IWB6 1497 aa18.45■□□□□ 0.54
SSX3-204ENST00000612497 MAP3K4Q9Y6R4 1608 aa18.45■□□□□ 0.54
SSX3-204ENST00000612497 EPRSP07814 1512 aaKnown RBP18.44■□□□□ 0.54
SSX3-204ENST00000612497 UHRF1BP1LA0JNW5 1464 aa18.42■□□□□ 0.54
SSX3-204ENST00000612497 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
SSX3-204ENST00000612497 KIF27Q86VH2 1401 aa18.4■□□□□ 0.54
SSX3-204ENST00000612497 KDM5BQ9UGL1 1544 aa18.35■□□□□ 0.53
SSX3-204ENST00000612497 IQGAP2Q13576 1575 aa18.34■□□□□ 0.53
SSX3-204ENST00000612497 ZCCHC11Q5TAX3 1644 aaKnown RBP18.34■□□□□ 0.53
SSX3-204ENST00000612497 CARMIL1Q5VZK9 1371 aa18.33■□□□□ 0.53
SSX3-204ENST00000612497 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
SSX3-204ENST00000612497 KIF21BO75037 1637 aa18.27■□□□□ 0.52
SSX3-204ENST00000612497 WDR7Q9Y4E6 1490 aa18.26■□□□□ 0.51
SSX3-204ENST00000612497 CD109Q6YHK3 1445 aa18.24■□□□□ 0.51
SSX3-204ENST00000612497 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
SSX3-204ENST00000612497 MAGI3Q5TCQ9 1506 aa18.23■□□□□ 0.51
SSX3-204ENST00000612497 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
SSX3-204ENST00000612497 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
SSX3-204ENST00000612497 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
SSX3-204ENST00000612497 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
SSX3-204ENST00000612497 KIAA0556O60303 1618 aa18.18■□□□□ 0.5
SSX3-204ENST00000612497 PTPRMP28827 1452 aa18.18■□□□□ 0.5
SSX3-204ENST00000612497 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
SSX3-204ENST00000612497 PCF11O94913 1555 aaKnown RBP18.1■□□□□ 0.49
SSX3-204ENST00000612497 ARAP3Q8WWN8 1544 aa18.1■□□□□ 0.49
SSX3-204ENST00000612497 RAPGEF2Q9Y4G8 1499 aa18.08■□□□□ 0.49
SSX3-204ENST00000612497 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
SSX3-204ENST00000612497 ABCA8O94911 1581 aa18.05■□□□□ 0.48
SSX3-204ENST00000612497 MADDQ8WXG6 1647 aa18.04■□□□□ 0.48
SSX3-204ENST00000612497 BCORL1Q5H9F3 1711 aa18.03■□□□□ 0.48
SSX3-204ENST00000612497 RAPGEF3O95398 923 aa18.02■□□□□ 0.48
SSX3-204ENST00000612497 HSPA2P54652 639 aa18.01■□□□□ 0.47
SSX3-204ENST00000612497 CERKQ8TCT0 537 aa18.01■□□□□ 0.47
SSX3-204ENST00000612497 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
SSX3-204ENST00000612497 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
SSX3-204ENST00000612497 ARID3CA6NKF2 412 aa18■□□□□ 0.47
SSX3-204ENST00000612497 ILDR2Q71H61 639 aa18■□□□□ 0.47
SSX3-204ENST00000612497 SOCS7O14512 581 aa17.99■□□□□ 0.47
SSX3-204ENST00000612497 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
SSX3-204ENST00000612497 CTTNBP2Q8WZ74 1663 aa17.99■□□□□ 0.47
SSX3-204ENST00000612497 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
SSX3-204ENST00000612497 RIMS1Q86UR5 1692 aaKnown RBP17.97■□□□□ 0.47
SSX3-204ENST00000612497 ABCA9Q8IUA7 1624 aa17.94■□□□□ 0.46
SSX3-204ENST00000612497 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
SSX3-204ENST00000612497 ATP10BO94823 1461 aa17.92■□□□□ 0.46
SSX3-204ENST00000612497 NEO1Q92859 1461 aa17.92■□□□□ 0.46
SSX3-204ENST00000612497 FRMPD1Q5SYB0 1578 aa17.91■□□□□ 0.46
SSX3-204ENST00000612497 P3H3Q8IVL6 736 aa17.86■□□□□ 0.45
SSX3-204ENST00000612497 ARHGEF40Q8TER5 1519 aa17.86■□□□□ 0.45
SSX3-204ENST00000612497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
SSX3-204ENST00000612497 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
SSX3-204ENST00000612497 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
SSX3-204ENST00000612497 DENND4BO75064 1496 aaPredicted RBP17.82■□□□□ 0.44
SSX3-204ENST00000612497 FANCAO15360 1455 aa17.81■□□□□ 0.44
SSX3-204ENST00000612497 MLECQ14165 292 aa17.8■□□□□ 0.44
SSX3-204ENST00000612497 RICTORQ6R327 1708 aa17.8■□□□□ 0.44
SSX3-204ENST00000612497 AKNAQ7Z591 1439 aa17.79■□□□□ 0.44
SSX3-204ENST00000612497 SPATA31D1Q6ZQQ2 1576 aa17.79■□□□□ 0.44
SSX3-204ENST00000612497 FER1L4A9Z1Z3 1794 aa17.77■□□□□ 0.44
SSX3-204ENST00000612497 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
SSX3-204ENST00000612497 FHOD3Q2V2M9 1422 aa17.75■□□□□ 0.43
SSX3-204ENST00000612497 RAPGEF6Q8TEU7 1601 aa17.75■□□□□ 0.43
SSX3-204ENST00000612497 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
SSX3-204ENST00000612497 ZFYVE16Q7Z3T8 1539 aa17.73■□□□□ 0.43
SSX3-204ENST00000612497 TTC37Q6PGP7 1564 aa17.73■□□□□ 0.43
SSX3-204ENST00000612497 YEATS2Q9ULM3 1422 aa17.72■□□□□ 0.43
SSX3-204ENST00000612497 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
SSX3-204ENST00000612497 PREX1Q8TCU6 1659 aa17.72■□□□□ 0.43
SSX3-204ENST00000612497 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
SSX3-204ENST00000612497 PRXQ9BXM0 1461 aa17.71■□□□□ 0.43
SSX3-204ENST00000612497 ZMYM4Q5VZL5 1548 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms