RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 JPH4Q96JJ6 628 aa43.81■■■■■ 4.6
VEGFA-226ENST00000611736 RAPGEF2Q9Y4G8 1499 aa43.8■■■■■ 4.6
VEGFA-226ENST00000611736 KIAA0586Q9BVV6 1533 aa43.79■■■■■ 4.6
VEGFA-226ENST00000611736 CHIC1Q5VXU3 224 aa43.78■■■■■ 4.6
VEGFA-226ENST00000611736 PRG4Q92954 1404 aaPredicted RBP43.75■■■■■ 4.59
VEGFA-226ENST00000611736 PRXQ9BXM0 1461 aa43.61■■■■■ 4.57
VEGFA-226ENST00000611736 CSRNP3Q8WYN3 585 aa43.57■■■■■ 4.57
VEGFA-226ENST00000611736 IQGAP2Q13576 1575 aa43.57■■■■■ 4.57
VEGFA-226ENST00000611736 EEA1Q15075 1411 aa43.56■■■■■ 4.56
VEGFA-226ENST00000611736 FAM9AQ8IZU1 332 aaPredicted RBP43.51■■■■■ 4.56
VEGFA-226ENST00000611736 CTTNBP2Q8WZ74 1663 aa43.4■■■■■ 4.54
VEGFA-226ENST00000611736 CARMIL2Q6F5E8 1435 aa43.35■■■■■ 4.53
VEGFA-226ENST00000611736 TRHP20396 242 aaPredicted RBP43.33■■■■■ 4.53
VEGFA-226ENST00000611736 UGGT2Q9NYU1 1516 aa43.31■■■■■ 4.52
VEGFA-226ENST00000611736 DISP1Q96F81 1524 aa43.26■■■■■ 4.52
VEGFA-226ENST00000611736 TTBK1Q5TCY1 1321 aaPredicted RBP43.24■■■■■ 4.51
VEGFA-226ENST00000611736 TNIKQ9UKE5 1360 aa43.22■■■■■ 4.51
VEGFA-226ENST00000611736 PTPRGP23470 1445 aa43.21■■■■■ 4.51
VEGFA-226ENST00000611736 KIAA0556O60303 1618 aa43.15■■■■■ 4.5
VEGFA-226ENST00000611736 KIF21BO75037 1637 aa43.15■■■■■ 4.5
VEGFA-226ENST00000611736 ADCY10Q96PN6 1610 aa43.11■■■■■ 4.49
VEGFA-226ENST00000611736 GOLGA3Q08378 1498 aa43.06■■■■■ 4.48
VEGFA-226ENST00000611736 EHMT2Q96KQ7 1210 aa43.01■■■■■ 4.48
VEGFA-226ENST00000611736 NPM1P06748 294 aaKnown RBP eCLIP42.98■■■■■ 4.47
VEGFA-226ENST00000611736 UACAQ9BZF9 1416 aa42.91■■■■■ 4.46
VEGFA-226ENST00000611736 RANGAP1P46060 587 aaPredicted RBP42.88■■■■■ 4.45
VEGFA-226ENST00000611736 P3H3Q8IVL6 736 aa42.87■■■■■ 4.45
VEGFA-226ENST00000611736 UBTFP17480 764 aaKnown RBP42.85■■■■■ 4.45
VEGFA-226ENST00000611736 UHRF1BP1LA0JNW5 1464 aa42.85■■■■■ 4.45
VEGFA-226ENST00000611736 ABCC2Q92887 1545 aa42.83■■■■■ 4.45
VEGFA-226ENST00000611736 SAMD9Q5K651 1589 aa42.82■■■■■ 4.45
VEGFA-226ENST00000611736 MAPKBP1O60336 1514 aa42.8■■■■■ 4.44
VEGFA-226ENST00000611736 PLB1Q6P1J6 1458 aa42.76■■■■■ 4.44
VEGFA-226ENST00000611736 ABCA8O94911 1581 aa42.68■■■■■ 4.42
VEGFA-226ENST00000611736 KIF13AQ9H1H9 1805 aa42.67■■■■■ 4.42
VEGFA-226ENST00000611736 KDM5BQ9UGL1 1544 aa42.65■■■■■ 4.42
VEGFA-226ENST00000611736 ABCC10Q5T3U5 1492 aa42.63■■■■■ 4.42
VEGFA-226ENST00000611736 FHOD3Q2V2M9 1422 aa42.63■■■■■ 4.41
VEGFA-226ENST00000611736 EFCAB5A4FU69 1503 aa42.61■■■■■ 4.41
VEGFA-226ENST00000611736 ZCCHC11Q5TAX3 1644 aaKnown RBP42.6■■■■■ 4.41
VEGFA-226ENST00000611736 FAM69CQ0P6D2 419 aa42.59■■■■■ 4.41
VEGFA-226ENST00000611736 ASXL2Q76L83 1435 aa42.58■■■■■ 4.41
VEGFA-226ENST00000611736 DIP2BQ9P265 1576 aa42.57■■■■■ 4.41
VEGFA-226ENST00000611736 RAPGEF6Q8TEU7 1601 aa42.46■■■■■ 4.39
VEGFA-226ENST00000611736 ARID3CA6NKF2 412 aa42.45■■■■■ 4.39
VEGFA-226ENST00000611736 ARHGAP35Q9NRY4 1499 aa42.42■■■■■ 4.38
VEGFA-226ENST00000611736 ATP10BO94823 1461 aa42.34■■■■■ 4.37
VEGFA-226ENST00000611736 WDR7Q9Y4E6 1490 aa42.34■■■■■ 4.37
VEGFA-226ENST00000611736 EPRSP07814 1512 aaKnown RBP42.32■■■■■ 4.37
VEGFA-226ENST00000611736 TSPOAP1O95153 1857 aa42.3■■■■■ 4.36
VEGFA-226ENST00000611736 NUP153P49790 1475 aaKnown RBP42.3■■■■■ 4.36
VEGFA-226ENST00000611736 GLI2P10070 1586 aa42.29■■■■■ 4.36
VEGFA-226ENST00000611736 FMN1Q68DA7 1419 aa42.22■■■■■ 4.35
VEGFA-226ENST00000611736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.22■■■■■ 4.35
VEGFA-226ENST00000611736 HNRNPUL2Q1KMD3 747 aaKnown RBP42.22■■■■■ 4.35
VEGFA-226ENST00000611736 KCNH8Q96L42 1107 aa42.2■■■■■ 4.35
VEGFA-226ENST00000611736 CLIP1P30622 1438 aa42.14■■■■■ 4.34
VEGFA-226ENST00000611736 MAP3K4Q9Y6R4 1608 aa42.12■■■■■ 4.33
VEGFA-226ENST00000611736 ATP1B4Q9UN42 357 aaPredicted RBP42.1■■■■■ 4.33
VEGFA-226ENST00000611736 PPRC1Q5VV67 1664 aaKnown RBP42.09■■■■■ 4.33
VEGFA-226ENST00000611736 HECW1Q76N89 1606 aa42.06■■■■■ 4.32
VEGFA-226ENST00000611736 LOC105371045A0A1W2PR82 267 aa42.04■■■■■ 4.32
VEGFA-226ENST00000611736 CDK13Q14004 1512 aaKnown RBP42.03■■■■■ 4.32
VEGFA-226ENST00000611736 CFAP43Q8NDM7 1665 aa41.99■■■■■ 4.31
VEGFA-226ENST00000611736 CD109Q6YHK3 1445 aa41.96■■■■■ 4.31
VEGFA-226ENST00000611736 PLEKHD1A6NEE1 506 aa41.96■■■■■ 4.31
VEGFA-226ENST00000611736 CEP162Q5TB80 1403 aa41.95■■■■■ 4.31
VEGFA-226ENST00000611736 PCF11O94913 1555 aaKnown RBP41.93■■■■■ 4.3
VEGFA-226ENST00000611736 KDM6BO15054 1643 aa41.93■■■■■ 4.3
VEGFA-226ENST00000611736 TEX14Q8IWB6 1497 aa41.92■■■■■ 4.3
VEGFA-226ENST00000611736 CASKIN1Q8WXD9 1431 aa41.89■■■■■ 4.3
VEGFA-226ENST00000611736 ABCA9Q8IUA7 1624 aa41.87■■■■■ 4.29
VEGFA-226ENST00000611736 MAGI3Q5TCQ9 1506 aa41.85■■■■■ 4.29
VEGFA-226ENST00000611736 LRRIQ1Q96JM4 1722 aa41.85■■■■■ 4.29
VEGFA-226ENST00000611736 FYCO1Q9BQS8 1478 aa41.79■■■■■ 4.28
VEGFA-226ENST00000611736 CDK11AQ9UQ88 783 aaPredicted RBP41.76■■■■■ 4.28
VEGFA-226ENST00000611736 CCDC18Q5T9S5 1454 aa41.72■■■■■ 4.27
VEGFA-226ENST00000611736 COL17A1Q9UMD9 1497 aaPredicted RBP41.71■■■■■ 4.27
VEGFA-226ENST00000611736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP41.7■■■■■ 4.272e-6■■□□□ 11.9
VEGFA-226ENST00000611736 TTC37Q6PGP7 1564 aa41.67■■■■■ 4.26
VEGFA-226ENST00000611736 TROQ12816 1431 aaPredicted RBP41.65■■■■■ 4.26
VEGFA-226ENST00000611736 AEBP2Q6ZN18 517 aaPredicted RBP41.65■■■■■ 4.26
VEGFA-226ENST00000611736 KIF14Q15058 1648 aa41.58■■■■■ 4.25
VEGFA-226ENST00000611736 NEO1Q92859 1461 aa41.53■■■■■ 4.24
VEGFA-226ENST00000611736 PHLDB1Q86UU1 1377 aa41.5■■■■■ 4.23
VEGFA-226ENST00000611736 ARAP3Q8WWN8 1544 aa41.49■■■■■ 4.23
VEGFA-226ENST00000611736 FANCAO15360 1455 aa41.47■■■■■ 4.23
VEGFA-226ENST00000611736 MYO5CQ9NQX4 1742 aa41.44■■■■■ 4.22
VEGFA-226ENST00000611736 PLCH2O75038 1416 aa41.44■■■■■ 4.22
VEGFA-226ENST00000611736 CFAP74Q9C0B2 1584 aa41.42■■■■■ 4.22
VEGFA-226ENST00000611736 VPS8Q8N3P4 1428 aa41.42■■■■■ 4.22
VEGFA-226ENST00000611736 AKNAQ7Z591 1439 aa41.39■■■■■ 4.22
VEGFA-226ENST00000611736 RAPGEF3O95398 923 aa41.34■■■■■ 4.21
VEGFA-226ENST00000611736 MTUS2Q5JR59 1369 aa41.33■■■■■ 4.21
VEGFA-226ENST00000611736 ARHGAP5Q13017 1502 aa41.29■■■■■ 4.2
VEGFA-226ENST00000611736 EFCAB2Q5VUJ9 269 aa41.29■■■■■ 4.2
VEGFA-226ENST00000611736 DENND4BO75064 1496 aaPredicted RBP41.28■■■■■ 4.2
VEGFA-226ENST00000611736 FRMPD1Q5SYB0 1578 aa41.26■■■■■ 4.2
VEGFA-226ENST00000611736 ADGRL1O94910 1474 aa41.25■■■■■ 4.19
VEGFA-226ENST00000611736 CDC42BPBQ9Y5S2 1711 aa41.24■■■■■ 4.19
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