RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CEP162Q5TB80 1403 aa26.63■■□□□ 1.85
PMF1-206ENST00000606952 CHMP7Q8WUX9 453 aaPredicted RBP26.61■■□□□ 1.85
PMF1-206ENST00000606952 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
PMF1-206ENST00000606952 IQGAP2Q13576 1575 aa26.58■■□□□ 1.85
PMF1-206ENST00000606952 CLIP1P30622 1438 aa26.53■■□□□ 1.84
PMF1-206ENST00000606952 EFCAB5A4FU69 1503 aa26.52■■□□□ 1.84
PMF1-206ENST00000606952 UGGT2Q9NYU1 1516 aa26.5■■□□□ 1.83
PMF1-206ENST00000606952 SAMD9Q5K651 1589 aa26.5■■□□□ 1.83
PMF1-206ENST00000606952 FBLN2P98095 1184 aa26.47■■□□□ 1.83
PMF1-206ENST00000606952 CLASP1Q7Z460 1538 aa26.46■■□□□ 1.83
PMF1-206ENST00000606952 ARHGAP35Q9NRY4 1499 aa26.46■■□□□ 1.83
PMF1-206ENST00000606952 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
PMF1-206ENST00000606952 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
PMF1-206ENST00000606952 KIAA0556O60303 1618 aa26.34■■□□□ 1.81
PMF1-206ENST00000606952 DISP1Q96F81 1524 aa26.34■■□□□ 1.81
PMF1-206ENST00000606952 VPS8Q8N3P4 1428 aa26.29■■□□□ 1.8
PMF1-206ENST00000606952 JPH4Q96JJ6 628 aa26.26■■□□□ 1.79
PMF1-206ENST00000606952 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
PMF1-206ENST00000606952 CARMIL2Q6F5E8 1435 aa26.22■■□□□ 1.79
PMF1-206ENST00000606952 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
PMF1-206ENST00000606952 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
PMF1-206ENST00000606952 FMN1Q68DA7 1419 aa26.19■■□□□ 1.78
PMF1-206ENST00000606952 PRG4Q92954 1404 aaPredicted RBP26.17■■□□□ 1.78
PMF1-206ENST00000606952 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
PMF1-206ENST00000606952 FYCO1Q9BQS8 1478 aa26.11■■□□□ 1.77
PMF1-206ENST00000606952 CASKIN1Q8WXD9 1431 aa26.1■■□□□ 1.77
PMF1-206ENST00000606952 ERCC6L2Q5T890 1561 aa26.09■■□□□ 1.77
PMF1-206ENST00000606952 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
PMF1-206ENST00000606952 MAP3K1Q13233 1512 aa26.04■■□□□ 1.76
PMF1-206ENST00000606952 ABCA8O94911 1581 aa26.02■■□□□ 1.76
PMF1-206ENST00000606952 HECW1Q76N89 1606 aa26.02■■□□□ 1.76
PMF1-206ENST00000606952 RAPGEF6Q8TEU7 1601 aa26.02■■□□□ 1.76
PMF1-206ENST00000606952 CFAP43Q8NDM7 1665 aa25.99■■□□□ 1.75
PMF1-206ENST00000606952 LRRIQ1Q96JM4 1722 aa25.98■■□□□ 1.75
PMF1-206ENST00000606952 PTPRGP23470 1445 aa25.96■■□□□ 1.75
PMF1-206ENST00000606952 TIAM1Q13009 1591 aa25.95■■□□□ 1.74
PMF1-206ENST00000606952 CCDC18Q5T9S5 1454 aa25.91■■□□□ 1.74
PMF1-206ENST00000606952 PLB1Q6P1J6 1458 aa25.91■■□□□ 1.74
PMF1-206ENST00000606952 NUP153P49790 1475 aaKnown RBP25.9■■□□□ 1.74
PMF1-206ENST00000606952 ARHGEF11O15085 1522 aa25.89■■□□□ 1.74
PMF1-206ENST00000606952 UHRF1BP1LA0JNW5 1464 aa25.88■■□□□ 1.73
PMF1-206ENST00000606952 RIMBP3CA6NJZ7 1639 aa25.87■■□□□ 1.73
PMF1-206ENST00000606952 RIMBP3BA6NNM3 1639 aa25.87■■□□□ 1.73
PMF1-206ENST00000606952 RIMBP3Q9UFD9 1639 aa25.87■■□□□ 1.73
PMF1-206ENST00000606952 EPRSP07814 1512 aaKnown RBP25.87■■□□□ 1.73
PMF1-206ENST00000606952 UACAQ9BZF9 1416 aa25.87■■□□□ 1.73
PMF1-206ENST00000606952 ABCC2Q92887 1545 aa25.86■■□□□ 1.73
PMF1-206ENST00000606952 APLP2Q06481 763 aa25.79■■□□□ 1.72
PMF1-206ENST00000606952 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
PMF1-206ENST00000606952 CDK13Q14004 1512 aaKnown RBP25.77■■□□□ 1.72
PMF1-206ENST00000606952 ADCY10Q96PN6 1610 aa25.76■■□□□ 1.71
PMF1-206ENST00000606952 EHBP1L1Q8N3D4 1523 aa25.73■■□□□ 1.71
PMF1-206ENST00000606952 KDM5BQ9UGL1 1544 aa25.73■■□□□ 1.71
PMF1-206ENST00000606952 ATP10BO94823 1461 aa25.73■■□□□ 1.71
PMF1-206ENST00000606952 TTBK1Q5TCY1 1321 aaPredicted RBP25.71■■□□□ 1.71
PMF1-206ENST00000606952 MAGI3Q5TCQ9 1506 aa25.71■■□□□ 1.71
PMF1-206ENST00000606952 ZCCHC11Q5TAX3 1644 aaKnown RBP25.67■■□□□ 1.7
PMF1-206ENST00000606952 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
PMF1-206ENST00000606952 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
PMF1-206ENST00000606952 SUPT6HQ7KZ85 1726 aaKnown RBP25.63■■□□□ 1.69
PMF1-206ENST00000606952 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
PMF1-206ENST00000606952 TROQ12816 1431 aaPredicted RBP25.62■■□□□ 1.69
PMF1-206ENST00000606952 MTUS2Q5JR59 1369 aa25.61■■□□□ 1.69
PMF1-206ENST00000606952 CDK11AQ9UQ88 783 aaPredicted RBP25.58■■□□□ 1.69
PMF1-206ENST00000606952 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
PMF1-206ENST00000606952 NCOA2Q15596 1464 aa25.53■■□□□ 1.68
PMF1-206ENST00000606952 ARID3CA6NKF2 412 aa25.51■■□□□ 1.67
PMF1-206ENST00000606952 KIF14Q15058 1648 aa25.51■■□□□ 1.67
PMF1-206ENST00000606952 CYB5RLQ6IPT4 315 aa25.48■■□□□ 1.67
PMF1-206ENST00000606952 PLEKHD1A6NEE1 506 aa25.47■■□□□ 1.67
PMF1-206ENST00000606952 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
PMF1-206ENST00000606952 RRBP1Q9P2E9 1410 aaKnown RBP25.46■■□□□ 1.67
PMF1-206ENST00000606952 ABCC10Q5T3U5 1492 aa25.46■■□□□ 1.67
PMF1-206ENST00000606952 PHLDB1Q86UU1 1377 aa25.45■■□□□ 1.67
PMF1-206ENST00000606952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
PMF1-206ENST00000606952 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
PMF1-206ENST00000606952 WDR7Q9Y4E6 1490 aa25.45■■□□□ 1.66
PMF1-206ENST00000606952 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
PMF1-206ENST00000606952 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
PMF1-206ENST00000606952 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
PMF1-206ENST00000606952 ASXL2Q76L83 1435 aa25.4■■□□□ 1.66
PMF1-206ENST00000606952 CDC42BPAQ5VT25 1732 aa25.37■■□□□ 1.65
PMF1-206ENST00000606952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.37■■□□□ 1.65
PMF1-206ENST00000606952 FGD6Q6ZV73 1430 aa25.37■■□□□ 1.65
PMF1-206ENST00000606952 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
PMF1-206ENST00000606952 NPM1P06748 294 aaKnown RBP eCLIP25.36■■□□□ 1.65
PMF1-206ENST00000606952 TTC37Q6PGP7 1564 aa25.35■■□□□ 1.65
PMF1-206ENST00000606952 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
PMF1-206ENST00000606952 ABCA9Q8IUA7 1624 aa25.34■■□□□ 1.65
PMF1-206ENST00000606952 PREX2Q70Z35 1606 aa25.34■■□□□ 1.65
PMF1-206ENST00000606952 GPATCH8Q9UKJ3 1502 aaKnown RBP25.33■■□□□ 1.65
PMF1-206ENST00000606952 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
PMF1-206ENST00000606952 CCNB3Q8WWL7 1395 aa25.32■■□□□ 1.64
PMF1-206ENST00000606952 MYO5CQ9NQX4 1742 aa25.31■■□□□ 1.64
PMF1-206ENST00000606952 ARAP3Q8WWN8 1544 aa25.3■■□□□ 1.64
PMF1-206ENST00000606952 PTPN23Q9H3S7 1636 aa25.3■■□□□ 1.64
PMF1-206ENST00000606952 CDC42BPBQ9Y5S2 1711 aa25.27■■□□□ 1.64
PMF1-206ENST00000606952 GLI2P10070 1586 aa25.26■■□□□ 1.63
PMF1-206ENST00000606952 PLCH2O75038 1416 aa25.2■■□□□ 1.63
PMF1-206ENST00000606952 DIP2BQ9P265 1576 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms