RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 JPH4Q96JJ6 628 aa12.27□□□□□ -0.45
CUX2P1-201ENST00000606426 GOLGA3Q08378 1498 aa12.25□□□□□ -0.45
CUX2P1-201ENST00000606426 IQGAP2Q13576 1575 aa12.23□□□□□ -0.45
CUX2P1-201ENST00000606426 ARHGEF11O15085 1522 aa12.23□□□□□ -0.45
CUX2P1-201ENST00000606426 SHROOM2Q13796 1616 aa12.22□□□□□ -0.45
CUX2P1-201ENST00000606426 CARMIL2Q6F5E8 1435 aa12.21□□□□□ -0.45
CUX2P1-201ENST00000606426 PRG4Q92954 1404 aaPredicted RBP12.21□□□□□ -0.45
CUX2P1-201ENST00000606426 UBTFP17480 764 aaKnown RBP12.21□□□□□ -0.45
CUX2P1-201ENST00000606426 RIMBP3CA6NJZ7 1639 aa12.19□□□□□ -0.46
CUX2P1-201ENST00000606426 RIMBP3BA6NNM3 1639 aa12.19□□□□□ -0.46
CUX2P1-201ENST00000606426 RIMBP3Q9UFD9 1639 aa12.19□□□□□ -0.46
CUX2P1-201ENST00000606426 UGGT2Q9NYU1 1516 aa12.18□□□□□ -0.46
CUX2P1-201ENST00000606426 CTTNBP2Q8WZ74 1663 aa12.18□□□□□ -0.46
CUX2P1-201ENST00000606426 TNIKQ9UKE5 1360 aa12.15□□□□□ -0.46
CUX2P1-201ENST00000606426 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
CUX2P1-201ENST00000606426 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
CUX2P1-201ENST00000606426 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
CUX2P1-201ENST00000606426 DISP1Q96F81 1524 aa12.12□□□□□ -0.47
CUX2P1-201ENST00000606426 PTPRGP23470 1445 aa12.11□□□□□ -0.47
CUX2P1-201ENST00000606426 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
CUX2P1-201ENST00000606426 KIAA0556O60303 1618 aa12.11□□□□□ -0.47
CUX2P1-201ENST00000606426 EFCAB5A4FU69 1503 aa12.1□□□□□ -0.47
CUX2P1-201ENST00000606426 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
CUX2P1-201ENST00000606426 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
CUX2P1-201ENST00000606426 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
CUX2P1-201ENST00000606426 TTBK1Q5TCY1 1321 aaPredicted RBP12.04□□□□□ -0.48
CUX2P1-201ENST00000606426 UACAQ9BZF9 1416 aa12.03□□□□□ -0.48
CUX2P1-201ENST00000606426 LOC105371045A0A1W2PR82 267 aa12.03□□□□□ -0.48
CUX2P1-201ENST00000606426 NPM1P06748 294 aaKnown RBP eCLIP12.03□□□□□ -0.48
CUX2P1-201ENST00000606426 CLIP1P30622 1438 aa12.03□□□□□ -0.48
CUX2P1-201ENST00000606426 FMN1Q68DA7 1419 aa12.02□□□□□ -0.49
CUX2P1-201ENST00000606426 UHRF1BP1LA0JNW5 1464 aa12.02□□□□□ -0.49
CUX2P1-201ENST00000606426 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.49
CUX2P1-201ENST00000606426 FHOD3Q2V2M9 1422 aa12.01□□□□□ -0.49
CUX2P1-201ENST00000606426 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CUX2P1-201ENST00000606426 ABCC2Q92887 1545 aa11.99□□□□□ -0.49
CUX2P1-201ENST00000606426 ABCA8O94911 1581 aa11.96□□□□□ -0.49
CUX2P1-201ENST00000606426 PLB1Q6P1J6 1458 aa11.96□□□□□ -0.49
CUX2P1-201ENST00000606426 ADCY10Q96PN6 1610 aa11.96□□□□□ -0.5
CUX2P1-201ENST00000606426 KDM5BQ9UGL1 1544 aa11.94□□□□□ -0.5
CUX2P1-201ENST00000606426 RAPGEF6Q8TEU7 1601 aa11.93□□□□□ -0.5
CUX2P1-201ENST00000606426 MAPKBP1O60336 1514 aa11.91□□□□□ -0.5
CUX2P1-201ENST00000606426 CASKIN1Q8WXD9 1431 aa11.9□□□□□ -0.5
CUX2P1-201ENST00000606426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
CUX2P1-201ENST00000606426 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
CUX2P1-201ENST00000606426 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
CUX2P1-201ENST00000606426 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
CUX2P1-201ENST00000606426 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
CUX2P1-201ENST00000606426 HECW1Q76N89 1606 aa11.88□□□□□ -0.51
CUX2P1-201ENST00000606426 ATP10BO94823 1461 aa11.88□□□□□ -0.51
CUX2P1-201ENST00000606426 FYCO1Q9BQS8 1478 aa11.88□□□□□ -0.51
CUX2P1-201ENST00000606426 ASXL2Q76L83 1435 aa11.86□□□□□ -0.51
CUX2P1-201ENST00000606426 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
CUX2P1-201ENST00000606426 CCDC18Q5T9S5 1454 aa11.86□□□□□ -0.51
CUX2P1-201ENST00000606426 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
CUX2P1-201ENST00000606426 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
CUX2P1-201ENST00000606426 TRHP20396 242 aaPredicted RBP11.85□□□□□ -0.51
CUX2P1-201ENST00000606426 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
CUX2P1-201ENST00000606426 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
CUX2P1-201ENST00000606426 ARID3CA6NKF2 412 aa11.84□□□□□ -0.51
CUX2P1-201ENST00000606426 ABCC10Q5T3U5 1492 aa11.83□□□□□ -0.52
CUX2P1-201ENST00000606426 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
CUX2P1-201ENST00000606426 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
CUX2P1-201ENST00000606426 APLP2Q06481 763 aa11.79□□□□□ -0.52
CUX2P1-201ENST00000606426 CDK13Q14004 1512 aaKnown RBP11.79□□□□□ -0.52
CUX2P1-201ENST00000606426 GLI2P10070 1586 aa11.79□□□□□ -0.52
CUX2P1-201ENST00000606426 KCNH8Q96L42 1107 aa11.78□□□□□ -0.52
CUX2P1-201ENST00000606426 DIP2BQ9P265 1576 aa11.78□□□□□ -0.52
CUX2P1-201ENST00000606426 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.53
CUX2P1-201ENST00000606426 MAP3K1Q13233 1512 aa11.76□□□□□ -0.53
CUX2P1-201ENST00000606426 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
CUX2P1-201ENST00000606426 CD109Q6YHK3 1445 aa11.73□□□□□ -0.53
CUX2P1-201ENST00000606426 TEX14Q8IWB6 1497 aa11.72□□□□□ -0.53
CUX2P1-201ENST00000606426 KIF14Q15058 1648 aa11.71□□□□□ -0.54
CUX2P1-201ENST00000606426 ABCA9Q8IUA7 1624 aa11.71□□□□□ -0.54
CUX2P1-201ENST00000606426 TIAM1Q13009 1591 aa11.71□□□□□ -0.54
CUX2P1-201ENST00000606426 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
CUX2P1-201ENST00000606426 KIF13AQ9H1H9 1805 aa11.7□□□□□ -0.54
CUX2P1-201ENST00000606426 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
CUX2P1-201ENST00000606426 CFAP43Q8NDM7 1665 aa11.7□□□□□ -0.54
CUX2P1-201ENST00000606426 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
CUX2P1-201ENST00000606426 PHLDB1Q86UU1 1377 aa11.69□□□□□ -0.54
CUX2P1-201ENST00000606426 MAP3K4Q9Y6R4 1608 aa11.69□□□□□ -0.54
CUX2P1-201ENST00000606426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.69□□□□□ -0.54
CUX2P1-201ENST00000606426 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
CUX2P1-201ENST00000606426 PLCH2O75038 1416 aa11.67□□□□□ -0.54
CUX2P1-201ENST00000606426 CCNB3Q8WWL7 1395 aa11.66□□□□□ -0.54
CUX2P1-201ENST00000606426 ARAP3Q8WWN8 1544 aa11.65□□□□□ -0.54
CUX2P1-201ENST00000606426 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
CUX2P1-201ENST00000606426 NEO1Q92859 1461 aa11.64□□□□□ -0.55
CUX2P1-201ENST00000606426 AEBP2Q6ZN18 517 aaPredicted RBP11.64□□□□□ -0.55
CUX2P1-201ENST00000606426 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
CUX2P1-201ENST00000606426 KANK4Q5T7N3 995 aaPredicted RBP11.63□□□□□ -0.55
CUX2P1-201ENST00000606426 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
CUX2P1-201ENST00000606426 FANCAO15360 1455 aa11.63□□□□□ -0.55
CUX2P1-201ENST00000606426 NCOA2Q15596 1464 aa11.62□□□□□ -0.55
CUX2P1-201ENST00000606426 CFAP74Q9C0B2 1584 aa11.62□□□□□ -0.55
CUX2P1-201ENST00000606426 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
CUX2P1-201ENST00000606426 PPRC1Q5VV67 1664 aaKnown RBP11.61□□□□□ -0.55
CUX2P1-201ENST00000606426 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms