RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 KIF21BO75037 1637 aa16.21■□□□□ 0.19
GDF15-205ENST00000604609 KIAA0586Q9BVV6 1533 aa16.2■□□□□ 0.18
GDF15-205ENST00000604609 RANGAP1P46060 587 aaPredicted RBP16.2■□□□□ 0.18
GDF15-205ENST00000604609 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
GDF15-205ENST00000604609 ERCC6L2Q5T890 1561 aa16.18■□□□□ 0.18
GDF15-205ENST00000604609 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
GDF15-205ENST00000604609 JPH4Q96JJ6 628 aa16.18■□□□□ 0.18
GDF15-205ENST00000604609 PRG4Q92954 1404 aaPredicted RBP16.14■□□□□ 0.17
GDF15-205ENST00000604609 ARHGEF11O15085 1522 aa16.13■□□□□ 0.17
GDF15-205ENST00000604609 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
GDF15-205ENST00000604609 P3H3Q8IVL6 736 aa16.1■□□□□ 0.17
GDF15-205ENST00000604609 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
GDF15-205ENST00000604609 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
GDF15-205ENST00000604609 DISP1Q96F81 1524 aa16.08■□□□□ 0.16
GDF15-205ENST00000604609 UGGT2Q9NYU1 1516 aa16.06■□□□□ 0.16
GDF15-205ENST00000604609 ARAP1Q96P48 1450 aa16.06■□□□□ 0.16
GDF15-205ENST00000604609 RIMBP3CA6NJZ7 1639 aa16.05■□□□□ 0.16
GDF15-205ENST00000604609 RIMBP3BA6NNM3 1639 aa16.05■□□□□ 0.16
GDF15-205ENST00000604609 RIMBP3Q9UFD9 1639 aa16.05■□□□□ 0.16
GDF15-205ENST00000604609 TNIKQ9UKE5 1360 aa16.05■□□□□ 0.16
GDF15-205ENST00000604609 CTTNBP2Q8WZ74 1663 aa16.03■□□□□ 0.16
GDF15-205ENST00000604609 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
GDF15-205ENST00000604609 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
GDF15-205ENST00000604609 ARHGAP35Q9NRY4 1499 aa15.99■□□□□ 0.15
GDF15-205ENST00000604609 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
GDF15-205ENST00000604609 CARMIL2Q6F5E8 1435 aa15.98■□□□□ 0.15
GDF15-205ENST00000604609 PTPRGP23470 1445 aa15.96■□□□□ 0.15
GDF15-205ENST00000604609 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
GDF15-205ENST00000604609 SAMD9Q5K651 1589 aa15.96■□□□□ 0.14
GDF15-205ENST00000604609 CLIP1P30622 1438 aa15.95■□□□□ 0.14
GDF15-205ENST00000604609 PLB1Q6P1J6 1458 aa15.91■□□□□ 0.14
GDF15-205ENST00000604609 ARID3CA6NKF2 412 aa15.9■□□□□ 0.14
GDF15-205ENST00000604609 EFCAB5A4FU69 1503 aa15.89■□□□□ 0.13
GDF15-205ENST00000604609 UACAQ9BZF9 1416 aa15.85■□□□□ 0.13
GDF15-205ENST00000604609 ADCY10Q96PN6 1610 aa15.82■□□□□ 0.12
GDF15-205ENST00000604609 ABCA8O94911 1581 aa15.81■□□□□ 0.12
GDF15-205ENST00000604609 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
GDF15-205ENST00000604609 ATP1B4Q9UN42 357 aaPredicted RBP15.79■□□□□ 0.12
GDF15-205ENST00000604609 NUP153P49790 1475 aaKnown RBP15.78■□□□□ 0.12
GDF15-205ENST00000604609 UHRF1BP1LA0JNW5 1464 aa15.78■□□□□ 0.12
GDF15-205ENST00000604609 FMN1Q68DA7 1419 aa15.77■□□□□ 0.11
GDF15-205ENST00000604609 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
GDF15-205ENST00000604609 ATP10BO94823 1461 aa15.73■□□□□ 0.11
GDF15-205ENST00000604609 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
GDF15-205ENST00000604609 CDK13Q14004 1512 aaKnown RBP15.73■□□□□ 0.11
GDF15-205ENST00000604609 CASKIN1Q8WXD9 1431 aa15.72■□□□□ 0.11
GDF15-205ENST00000604609 KDM5BQ9UGL1 1544 aa15.72■□□□□ 0.11
GDF15-205ENST00000604609 VPS8Q8N3P4 1428 aa15.71■□□□□ 0.11
GDF15-205ENST00000604609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
GDF15-205ENST00000604609 NPM1P06748 294 aaKnown RBP eCLIP15.69■□□□□ 0.1
GDF15-205ENST00000604609 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
GDF15-205ENST00000604609 EPRSP07814 1512 aaKnown RBP15.68■□□□□ 0.1
GDF15-205ENST00000604609 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
GDF15-205ENST00000604609 ZCCHC11Q5TAX3 1644 aaKnown RBP15.66■□□□□ 0.1
GDF15-205ENST00000604609 FYCO1Q9BQS8 1478 aa15.65■□□□□ 0.1
GDF15-205ENST00000604609 HECW1Q76N89 1606 aa15.64■□□□□ 0.09
GDF15-205ENST00000604609 KCNH8Q96L42 1107 aa15.62■□□□□ 0.09
GDF15-205ENST00000604609 MAGI3Q5TCQ9 1506 aa15.62■□□□□ 0.09
GDF15-205ENST00000604609 MAPKBP1O60336 1514 aa15.61■□□□□ 0.09
GDF15-205ENST00000604609 WDR7Q9Y4E6 1490 aa15.6■□□□□ 0.09
GDF15-205ENST00000604609 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
GDF15-205ENST00000604609 LRRIQ1Q96JM4 1722 aa15.6■□□□□ 0.09
GDF15-205ENST00000604609 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
GDF15-205ENST00000604609 FAM69CQ0P6D2 419 aa15.58■□□□□ 0.08
GDF15-205ENST00000604609 PPARGC1BQ86YN6 1023 aaKnown RBP15.58■□□□□ 0.08
GDF15-205ENST00000604609 PLEKHD1A6NEE1 506 aa15.56■□□□□ 0.08
GDF15-205ENST00000604609 ABCC10Q5T3U5 1492 aa15.56■□□□□ 0.08
GDF15-205ENST00000604609 CCDC18Q5T9S5 1454 aa15.55■□□□□ 0.08
GDF15-205ENST00000604609 TROQ12816 1431 aaPredicted RBP15.53■□□□□ 0.08
GDF15-205ENST00000604609 DIP2BQ9P265 1576 aa15.53■□□□□ 0.08
GDF15-205ENST00000604609 TIAM1Q13009 1591 aa15.52■□□□□ 0.07
GDF15-205ENST00000604609 KIF14Q15058 1648 aa15.5■□□□□ 0.07
GDF15-205ENST00000604609 CDK11AQ9UQ88 783 aaPredicted RBP15.5■□□□□ 0.07
GDF15-205ENST00000604609 MTUS2Q5JR59 1369 aa15.49■□□□□ 0.07
GDF15-205ENST00000604609 LRRC9Q6ZRR7 1453 aa15.49■□□□□ 0.07
GDF15-205ENST00000604609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.47■□□□□ 0.07
GDF15-205ENST00000604609 APLP2Q06481 763 aa15.46■□□□□ 0.07
GDF15-205ENST00000604609 CFAP43Q8NDM7 1665 aa15.46■□□□□ 0.07
GDF15-205ENST00000604609 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
GDF15-205ENST00000604609 MAP3K1Q13233 1512 aa15.44■□□□□ 0.06
GDF15-205ENST00000604609 GLI2P10070 1586 aa15.44■□□□□ 0.06
GDF15-205ENST00000604609 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
GDF15-205ENST00000604609 EHBP1L1Q8N3D4 1523 aa15.43■□□□□ 0.06
GDF15-205ENST00000604609 NCOA2Q15596 1464 aa15.42■□□□□ 0.06
GDF15-205ENST00000604609 KIF13AQ9H1H9 1805 aa15.4■□□□□ 0.06
GDF15-205ENST00000604609 ABCA9Q8IUA7 1624 aa15.4■□□□□ 0.06
GDF15-205ENST00000604609 PHLDB1Q86UU1 1377 aa15.39■□□□□ 0.05
GDF15-205ENST00000604609 GPATCH8Q9UKJ3 1502 aaKnown RBP15.38■□□□□ 0.05
GDF15-205ENST00000604609 MAP3K4Q9Y6R4 1608 aa15.38■□□□□ 0.05
GDF15-205ENST00000604609 PLCH2O75038 1416 aa15.37■□□□□ 0.05
GDF15-205ENST00000604609 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
GDF15-205ENST00000604609 CCNB3Q8WWL7 1395 aa15.36■□□□□ 0.05
GDF15-205ENST00000604609 PPRC1Q5VV67 1664 aaKnown RBP15.35■□□□□ 0.05
GDF15-205ENST00000604609 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
GDF15-205ENST00000604609 ZNF777Q9ULD5 760 aaPredicted RBP15.34■□□□□ 0.05
GDF15-205ENST00000604609 FANCAO15360 1455 aa15.33■□□□□ 0.04
GDF15-205ENST00000604609 ARHGAP5Q13017 1502 aa15.32■□□□□ 0.04
GDF15-205ENST00000604609 CFDP1Q9UEE9 299 aaPredicted RBP15.31■□□□□ 0.04
GDF15-205ENST00000604609 TSPOAP1O95153 1857 aa15.3■□□□□ 0.04
GDF15-205ENST00000604609 SUPT6HQ7KZ85 1726 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms