RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 NISCHQ9Y2I1 1504 aa23.52■■□□□ 1.36
GDF15-205ENST00000604609 CCDC180Q9P1Z9 1646 aa20.61■□□□□ 0.89
GDF15-205ENST00000604609 ABCC9O60706 1549 aa20.21■□□□□ 0.83
GDF15-205ENST00000604609 DCAF8L2P0C7V8 631 aa19.69■□□□□ 0.74
GDF15-205ENST00000604609 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
GDF15-205ENST00000604609 NACADO15069 1562 aa19.39■□□□□ 0.69
GDF15-205ENST00000604609 DCAF1Q9Y4B6 1507 aa19.36■□□□□ 0.69
GDF15-205ENST00000604609 RB1CC1Q8TDY2 1594 aa19.35■□□□□ 0.69
GDF15-205ENST00000604609 MYO15BQ96JP2 1530 aa19.32■□□□□ 0.68
GDF15-205ENST00000604609 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
GDF15-205ENST00000604609 PABPN1Q86U42 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
GDF15-205ENST00000604609 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
GDF15-205ENST00000604609 BICRAQ9NZM4 1560 aa18.88■□□□□ 0.61
GDF15-205ENST00000604609 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
GDF15-205ENST00000604609 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
GDF15-205ENST00000604609 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
GDF15-205ENST00000604609 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
GDF15-205ENST00000604609 MROH2BQ7Z745 1585 aa18.21■□□□□ 0.51
GDF15-205ENST00000604609 CC2D2AQ9P2K1 1620 aa18.18■□□□□ 0.5
GDF15-205ENST00000604609 SMARCA4P51532 1647 aa18.16■□□□□ 0.5
GDF15-205ENST00000604609 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
GDF15-205ENST00000604609 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
GDF15-205ENST00000604609 ATAD2BQ9ULI0 1458 aa18.07■□□□□ 0.48
GDF15-205ENST00000604609 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
GDF15-205ENST00000604609 WIZO95785 1651 aa17.96■□□□□ 0.47
GDF15-205ENST00000604609 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
GDF15-205ENST00000604609 PEG3Q9GZU2 1588 aa17.93■□□□□ 0.46
GDF15-205ENST00000604609 SUPT5HO00267 1087 aaKnown RBP17.92■□□□□ 0.46
GDF15-205ENST00000604609 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
GDF15-205ENST00000604609 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
GDF15-205ENST00000604609 TOP2AP11388 1531 aaKnown RBP17.76■□□□□ 0.43
GDF15-205ENST00000604609 CCDC88BA6NC98 1476 aa17.63■□□□□ 0.41
GDF15-205ENST00000604609 NESP48681 1621 aa17.59■□□□□ 0.41
GDF15-205ENST00000604609 CADPSQ9ULU8 1353 aa17.49■□□□□ 0.39
GDF15-205ENST00000604609 CFTRP13569 1480 aa17.43■□□□□ 0.38
GDF15-205ENST00000604609 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
GDF15-205ENST00000604609 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
GDF15-205ENST00000604609 FANCD2Q9BXW9 1451 aa17.3■□□□□ 0.36
GDF15-205ENST00000604609 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
GDF15-205ENST00000604609 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
GDF15-205ENST00000604609 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
GDF15-205ENST00000604609 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
GDF15-205ENST00000604609 URB2Q14146 1524 aaKnown RBP17.15■□□□□ 0.34
GDF15-205ENST00000604609 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
GDF15-205ENST00000604609 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
GDF15-205ENST00000604609 WDR62O43379 1518 aa17.06■□□□□ 0.32
GDF15-205ENST00000604609 PRDM2Q13029 1718 aa17.06■□□□□ 0.32
GDF15-205ENST00000604609 CUX1P39880 1505 aa17.06■□□□□ 0.32
GDF15-205ENST00000604609 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
GDF15-205ENST00000604609 WRNQ14191 1432 aaPredicted RBP eCLIP17.01■□□□□ 0.31
GDF15-205ENST00000604609 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
GDF15-205ENST00000604609 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
GDF15-205ENST00000604609 CUX2O14529 1486 aa16.97■□□□□ 0.31
GDF15-205ENST00000604609 FGD5Q6ZNL6 1462 aa16.94■□□□□ 0.3
GDF15-205ENST00000604609 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
GDF15-205ENST00000604609 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
GDF15-205ENST00000604609 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
GDF15-205ENST00000604609 SOGA1O94964 1423 aa16.87■□□□□ 0.29
GDF15-205ENST00000604609 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
GDF15-205ENST00000604609 CHIC1Q5VXU3 224 aa16.85■□□□□ 0.29
GDF15-205ENST00000604609 DNAJC5Q9H3Z4 198 aa16.85■□□□□ 0.29
GDF15-205ENST00000604609 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
GDF15-205ENST00000604609 BIVM-ERCC5R4GMW8 1640 aa16.83■□□□□ 0.28
GDF15-205ENST00000604609 TDRD9Q8NDG6 1382 aaKnown RBP16.82■□□□□ 0.28
GDF15-205ENST00000604609 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
GDF15-205ENST00000604609 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
GDF15-205ENST00000604609 AQRO60306 1485 aaKnown RBP eCLIP16.79■□□□□ 0.283e-9■■■■■ 37.1
GDF15-205ENST00000604609 ABCA10Q8WWZ4 1543 aa16.73■□□□□ 0.27
GDF15-205ENST00000604609 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
GDF15-205ENST00000604609 EIF4G3O43432 1585 aaKnown RBP16.68■□□□□ 0.26
GDF15-205ENST00000604609 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
GDF15-205ENST00000604609 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
GDF15-205ENST00000604609 ABCA5Q8WWZ7 1642 aa16.62■□□□□ 0.25
GDF15-205ENST00000604609 FAM9AQ8IZU1 332 aaPredicted RBP16.6■□□□□ 0.25
GDF15-205ENST00000604609 KIF27Q86VH2 1401 aa16.6■□□□□ 0.25
GDF15-205ENST00000604609 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
GDF15-205ENST00000604609 GRIN2BQ13224 1484 aa16.59■□□□□ 0.25
GDF15-205ENST00000604609 IGF1RP08069 1367 aa16.58■□□□□ 0.24
GDF15-205ENST00000604609 FBLN2P98095 1184 aa16.53■□□□□ 0.24
GDF15-205ENST00000604609 ERICH3Q5RHP9 1530 aa16.49■□□□□ 0.23
GDF15-205ENST00000604609 MAGI1Q96QZ7 1491 aaPredicted RBP16.48■□□□□ 0.23
GDF15-205ENST00000604609 PBRM1Q86U86 1689 aa16.48■□□□□ 0.23
GDF15-205ENST00000604609 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
GDF15-205ENST00000604609 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
GDF15-205ENST00000604609 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
GDF15-205ENST00000604609 FHAD1B1AJZ9 1412 aa16.45■□□□□ 0.22
GDF15-205ENST00000604609 CSRNP3Q8WYN3 585 aa16.45■□□□□ 0.22
GDF15-205ENST00000604609 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
GDF15-205ENST00000604609 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
GDF15-205ENST00000604609 GRIN2AQ12879 1464 aa16.41■□□□□ 0.22
GDF15-205ENST00000604609 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
GDF15-205ENST00000604609 EEA1Q15075 1411 aa16.37■□□□□ 0.21
GDF15-205ENST00000604609 OSCARQ8IYS5 282 aa16.37■□□□□ 0.21
GDF15-205ENST00000604609 CHD1O14646 1710 aa16.36■□□□□ 0.21
GDF15-205ENST00000604609 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
GDF15-205ENST00000604609 NUP160Q12769 1436 aa16.33■□□□□ 0.2
GDF15-205ENST00000604609 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
GDF15-205ENST00000604609 CUL7Q14999 1698 aa16.33■□□□□ 0.2
GDF15-205ENST00000604609 CLASP1Q7Z460 1538 aa16.27■□□□□ 0.2
GDF15-205ENST00000604609 LOC105371045A0A1W2PR82 267 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms