RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 ARAP1Q96P48 1450 aa10.24□□□□□ -0.77
FOCAD-213ENST00000604254 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
FOCAD-213ENST00000604254 FBLN2P98095 1184 aa10.21□□□□□ -0.77
FOCAD-213ENST00000604254 SYNJ2O15056 1496 aa10.2□□□□□ -0.78
FOCAD-213ENST00000604254 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
FOCAD-213ENST00000604254 CHMP7Q8WUX9 453 aaPredicted RBP10.16□□□□□ -0.78
FOCAD-213ENST00000604254 ERICH3Q5RHP9 1530 aa10.16□□□□□ -0.78
FOCAD-213ENST00000604254 CLASP1Q7Z460 1538 aa10.16□□□□□ -0.78
FOCAD-213ENST00000604254 RNF216Q9NWF9 866 aaPredicted RBP10.14□□□□□ -0.79
FOCAD-213ENST00000604254 GRIN2AQ12879 1464 aa10.12□□□□□ -0.79
FOCAD-213ENST00000604254 FHAD1B1AJZ9 1412 aa10.11□□□□□ -0.79
FOCAD-213ENST00000604254 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
FOCAD-213ENST00000604254 CUL7Q14999 1698 aa10.1□□□□□ -0.79
FOCAD-213ENST00000604254 HOXD11P31277 338 aaPredicted RBP10.09□□□□□ -0.79
FOCAD-213ENST00000604254 KIF27Q86VH2 1401 aa10.07□□□□□ -0.8
FOCAD-213ENST00000604254 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
FOCAD-213ENST00000604254 NUP160Q12769 1436 aa10.06□□□□□ -0.8
FOCAD-213ENST00000604254 RUSC2Q8N2Y8 1516 aa10.05□□□□□ -0.8
FOCAD-213ENST00000604254 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
FOCAD-213ENST00000604254 ERCC6L2Q5T890 1561 aa10.01□□□□□ -0.81
FOCAD-213ENST00000604254 KIF13AQ9H1H9 1805 aa10□□□□□ -0.81
FOCAD-213ENST00000604254 IGF1RP08069 1367 aa9.99□□□□□ -0.81
FOCAD-213ENST00000604254 CARMIL1Q5VZK9 1371 aa9.96□□□□□ -0.82
FOCAD-213ENST00000604254 CTTNBP2Q8WZ74 1663 aa9.94□□□□□ -0.82
FOCAD-213ENST00000604254 KIAA0586Q9BVV6 1533 aa9.94□□□□□ -0.82
FOCAD-213ENST00000604254 PRG4Q92954 1404 aaPredicted RBP9.94□□□□□ -0.82
FOCAD-213ENST00000604254 EHMT2Q96KQ7 1210 aa9.94□□□□□ -0.82
FOCAD-213ENST00000604254 IQGAP2Q13576 1575 aa9.93□□□□□ -0.82
FOCAD-213ENST00000604254 ILDR1Q86SU0 546 aaPredicted RBP9.93□□□□□ -0.82
FOCAD-213ENST00000604254 RAPGEF2Q9Y4G8 1499 aa9.92□□□□□ -0.82
FOCAD-213ENST00000604254 POTEDQ86YR6 584 aa9.92□□□□□ -0.82
FOCAD-213ENST00000604254 JPH4Q96JJ6 628 aa9.91□□□□□ -0.82
FOCAD-213ENST00000604254 DCAF8L1A6NGE4 600 aa9.89□□□□□ -0.83
FOCAD-213ENST00000604254 KDM4FA0A1W2PPD8 638 aa9.86□□□□□ -0.83
FOCAD-213ENST00000604254 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
FOCAD-213ENST00000604254 ADCY10Q96PN6 1610 aa9.85□□□□□ -0.83
FOCAD-213ENST00000604254 KIAA0556O60303 1618 aa9.85□□□□□ -0.83
FOCAD-213ENST00000604254 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
FOCAD-213ENST00000604254 EEA1Q15075 1411 aa9.84□□□□□ -0.83
FOCAD-213ENST00000604254 UGGT2Q9NYU1 1516 aa9.84□□□□□ -0.83
FOCAD-213ENST00000604254 DISP1Q96F81 1524 aa9.82□□□□□ -0.84
FOCAD-213ENST00000604254 ABCC10Q5T3U5 1492 aa9.81□□□□□ -0.84
FOCAD-213ENST00000604254 TNIKQ9UKE5 1360 aa9.81□□□□□ -0.84
FOCAD-213ENST00000604254 ZBTB22O15209 634 aa9.81□□□□□ -0.84
FOCAD-213ENST00000604254 PTPRGP23470 1445 aa9.81□□□□□ -0.84
FOCAD-213ENST00000604254 MAPKBP1O60336 1514 aa9.8□□□□□ -0.84
FOCAD-213ENST00000604254 TTBK1Q5TCY1 1321 aaPredicted RBP9.8□□□□□ -0.84
FOCAD-213ENST00000604254 GOLGA3Q08378 1498 aa9.79□□□□□ -0.84
FOCAD-213ENST00000604254 KDM6BO15054 1643 aa9.78□□□□□ -0.84
FOCAD-213ENST00000604254 KIF21BO75037 1637 aa9.78□□□□□ -0.84
FOCAD-213ENST00000604254 NPM1P06748 294 aaKnown RBP eCLIP9.78□□□□□ -0.84
FOCAD-213ENST00000604254 FAM69CQ0P6D2 419 aa9.78□□□□□ -0.84
FOCAD-213ENST00000604254 CSRNP3Q8WYN3 585 aa9.78□□□□□ -0.84
FOCAD-213ENST00000604254 TSPOAP1O95153 1857 aa9.77□□□□□ -0.85
FOCAD-213ENST00000604254 ABCC2Q92887 1545 aa9.77□□□□□ -0.85
FOCAD-213ENST00000604254 DIP2BQ9P265 1576 aa9.76□□□□□ -0.85
FOCAD-213ENST00000604254 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
FOCAD-213ENST00000604254 FAM9AQ8IZU1 332 aaPredicted RBP9.76□□□□□ -0.85
FOCAD-213ENST00000604254 UHRF1BP1LA0JNW5 1464 aa9.75□□□□□ -0.85
FOCAD-213ENST00000604254 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
FOCAD-213ENST00000604254 ZCCHC11Q5TAX3 1644 aaKnown RBP9.74□□□□□ -0.85
FOCAD-213ENST00000604254 UACAQ9BZF9 1416 aa9.74□□□□□ -0.85
FOCAD-213ENST00000604254 ABCA8O94911 1581 aa9.71□□□□□ -0.85
FOCAD-213ENST00000604254 PLB1Q6P1J6 1458 aa9.71□□□□□ -0.86
FOCAD-213ENST00000604254 KDM5BQ9UGL1 1544 aa9.7□□□□□ -0.86
FOCAD-213ENST00000604254 EFCAB5A4FU69 1503 aa9.69□□□□□ -0.86
FOCAD-213ENST00000604254 ASXL2Q76L83 1435 aa9.69□□□□□ -0.86
FOCAD-213ENST00000604254 RAPGEF6Q8TEU7 1601 aa9.68□□□□□ -0.86
FOCAD-213ENST00000604254 FOXD4L1Q9NU39 408 aa9.68□□□□□ -0.86
FOCAD-213ENST00000604254 GLI2P10070 1586 aa9.67□□□□□ -0.86
FOCAD-213ENST00000604254 RANGAP1P46060 587 aaPredicted RBP9.66□□□□□ -0.86
FOCAD-213ENST00000604254 P3H3Q8IVL6 736 aa9.66□□□□□ -0.86
FOCAD-213ENST00000604254 MAP3K4Q9Y6R4 1608 aa9.66□□□□□ -0.86
FOCAD-213ENST00000604254 HECW2Q9P2P5 1572 aa9.65□□□□□ -0.86
FOCAD-213ENST00000604254 WDR7Q9Y4E6 1490 aa9.65□□□□□ -0.87
FOCAD-213ENST00000604254 FHOD3Q2V2M9 1422 aa9.65□□□□□ -0.87
FOCAD-213ENST00000604254 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
FOCAD-213ENST00000604254 EPRSP07814 1512 aaKnown RBP9.64□□□□□ -0.87
FOCAD-213ENST00000604254 ADGRL1O94910 1474 aa9.64□□□□□ -0.87
FOCAD-213ENST00000604254 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
FOCAD-213ENST00000604254 FBXO41Q8TF61 875 aa9.63□□□□□ -0.87
FOCAD-213ENST00000604254 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
FOCAD-213ENST00000604254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.62□□□□□ -0.87
FOCAD-213ENST00000604254 NUP153P49790 1475 aaKnown RBP9.59□□□□□ -0.87
FOCAD-213ENST00000604254 TEX14Q8IWB6 1497 aa9.59□□□□□ -0.87
FOCAD-213ENST00000604254 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
FOCAD-213ENST00000604254 HECW1Q76N89 1606 aa9.59□□□□□ -0.87
FOCAD-213ENST00000604254 ATP10BO94823 1461 aa9.59□□□□□ -0.87
FOCAD-213ENST00000604254 ARHGAP35Q9NRY4 1499 aa9.58□□□□□ -0.88
FOCAD-213ENST00000604254 FMN1Q68DA7 1419 aa9.56□□□□□ -0.88
FOCAD-213ENST00000604254 ABCA9Q8IUA7 1624 aa9.56□□□□□ -0.88
FOCAD-213ENST00000604254 COL17A1Q9UMD9 1497 aaPredicted RBP9.56□□□□□ -0.88
FOCAD-213ENST00000604254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
FOCAD-213ENST00000604254 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
FOCAD-213ENST00000604254 KCNH8Q96L42 1107 aa9.55□□□□□ -0.88
FOCAD-213ENST00000604254 LRRIQ1Q96JM4 1722 aa9.54□□□□□ -0.88
FOCAD-213ENST00000604254 CDK13Q14004 1512 aaKnown RBP9.54□□□□□ -0.88
FOCAD-213ENST00000604254 MAGI3Q5TCQ9 1506 aa9.54□□□□□ -0.88
FOCAD-213ENST00000604254 CD109Q6YHK3 1445 aa9.54□□□□□ -0.88
FOCAD-213ENST00000604254 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms