RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 KIF13AQ9H1H9 1805 aa30■■■□□ 2.39
CCDC12-210ENST00000604181 IGF1RP08069 1367 aa29.86■■■□□ 2.37
CCDC12-210ENST00000604181 ADCY10Q96PN6 1610 aa29.82■■■□□ 2.36
CCDC12-210ENST00000604181 KIAA0586Q9BVV6 1533 aa29.8■■■□□ 2.36
CCDC12-210ENST00000604181 ABCC10Q5T3U5 1492 aa29.8■■■□□ 2.36
CCDC12-210ENST00000604181 FAM69CQ0P6D2 419 aa29.78■■■□□ 2.36
CCDC12-210ENST00000604181 MAPKBP1O60336 1514 aa29.76■■■□□ 2.36
CCDC12-210ENST00000604181 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
CCDC12-210ENST00000604181 DIP2BQ9P265 1576 aa29.73■■■□□ 2.35
CCDC12-210ENST00000604181 CUL7Q14999 1698 aa29.73■■■□□ 2.35
CCDC12-210ENST00000604181 NPM1P06748 294 aaKnown RBP eCLIP29.71■■■□□ 2.35
CCDC12-210ENST00000604181 CARMIL1Q5VZK9 1371 aa29.63■■■□□ 2.33
CCDC12-210ENST00000604181 PTPRGP23470 1445 aa29.57■■■□□ 2.32
CCDC12-210ENST00000604181 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
CCDC12-210ENST00000604181 TSPOAP1O95153 1857 aa29.55■■■□□ 2.32
CCDC12-210ENST00000604181 KDM6BO15054 1643 aa29.5■■■□□ 2.31
CCDC12-210ENST00000604181 TNIKQ9UKE5 1360 aa29.49■■■□□ 2.31
CCDC12-210ENST00000604181 IQGAP2Q13576 1575 aa29.47■■■□□ 2.31
CCDC12-210ENST00000604181 ABCC2Q92887 1545 aa29.45■■■□□ 2.31
CCDC12-210ENST00000604181 CARMIL2Q6F5E8 1435 aa29.45■■■□□ 2.3
CCDC12-210ENST00000604181 DISP1Q96F81 1524 aa29.41■■■□□ 2.3
CCDC12-210ENST00000604181 KDM4FA0A1W2PPD8 638 aa29.41■■■□□ 2.3
CCDC12-210ENST00000604181 ASXL2Q76L83 1435 aa29.4■■■□□ 2.3
CCDC12-210ENST00000604181 PPRC1Q5VV67 1664 aaKnown RBP29.36■■■□□ 2.29
CCDC12-210ENST00000604181 UHRF1BP1LA0JNW5 1464 aa29.36■■■□□ 2.29
CCDC12-210ENST00000604181 UACAQ9BZF9 1416 aa29.34■■■□□ 2.29
CCDC12-210ENST00000604181 PLB1Q6P1J6 1458 aa29.33■■■□□ 2.29
CCDC12-210ENST00000604181 GLI2P10070 1586 aa29.31■■■□□ 2.28
CCDC12-210ENST00000604181 RAPGEF2Q9Y4G8 1499 aa29.3■■■□□ 2.28
CCDC12-210ENST00000604181 UGGT2Q9NYU1 1516 aa29.3■■■□□ 2.28
CCDC12-210ENST00000604181 KDM5BQ9UGL1 1544 aa29.25■■■□□ 2.27
CCDC12-210ENST00000604181 KIAA0556O60303 1618 aa29.23■■■□□ 2.27
CCDC12-210ENST00000604181 EPRSP07814 1512 aaKnown RBP29.23■■■□□ 2.27
CCDC12-210ENST00000604181 COL17A1Q9UMD9 1497 aaPredicted RBP29.22■■■□□ 2.27
CCDC12-210ENST00000604181 ZCCHC11Q5TAX3 1644 aaKnown RBP29.2■■■□□ 2.27
CCDC12-210ENST00000604181 MAP3K4Q9Y6R4 1608 aa29.17■■■□□ 2.26
CCDC12-210ENST00000604181 CTTNBP2Q8WZ74 1663 aa29.08■■■□□ 2.25
CCDC12-210ENST00000604181 ADGRL1O94910 1474 aa29.07■■■□□ 2.24
CCDC12-210ENST00000604181 WDR7Q9Y4E6 1490 aa29.05■■■□□ 2.24
CCDC12-210ENST00000604181 TEX14Q8IWB6 1497 aa29.03■■■□□ 2.24
CCDC12-210ENST00000604181 ABCA8O94911 1581 aa29■■■□□ 2.23
CCDC12-210ENST00000604181 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
CCDC12-210ENST00000604181 GOLGA3Q08378 1498 aa28.95■■■□□ 2.22
CCDC12-210ENST00000604181 KCNH8Q96L42 1107 aa28.91■■■□□ 2.22
CCDC12-210ENST00000604181 CD109Q6YHK3 1445 aa28.9■■■□□ 2.22
CCDC12-210ENST00000604181 MAGI3Q5TCQ9 1506 aa28.89■■■□□ 2.21
CCDC12-210ENST00000604181 CFAP43Q8NDM7 1665 aa28.87■■■□□ 2.21
CCDC12-210ENST00000604181 ARID3CA6NKF2 412 aa28.82■■■□□ 2.2
CCDC12-210ENST00000604181 P3H3Q8IVL6 736 aa28.81■■■□□ 2.2
CCDC12-210ENST00000604181 ATP10BO94823 1461 aa28.77■■■□□ 2.2
CCDC12-210ENST00000604181 HECW2Q9P2P5 1572 aa28.76■■■□□ 2.19
CCDC12-210ENST00000604181 ILDR1Q86SU0 546 aaPredicted RBP28.75■■■□□ 2.19
CCDC12-210ENST00000604181 KIF21BO75037 1637 aa28.69■■■□□ 2.18
CCDC12-210ENST00000604181 SAMD9Q5K651 1589 aa28.68■■■□□ 2.18
CCDC12-210ENST00000604181 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
CCDC12-210ENST00000604181 CSRNP3Q8WYN3 585 aa28.65■■■□□ 2.18
CCDC12-210ENST00000604181 ABCA9Q8IUA7 1624 aa28.64■■■□□ 2.18
CCDC12-210ENST00000604181 RAPGEF6Q8TEU7 1601 aa28.61■■■□□ 2.17
CCDC12-210ENST00000604181 NUP153P49790 1475 aaKnown RBP28.55■■■□□ 2.16
CCDC12-210ENST00000604181 RAPGEF3O95398 923 aa28.54■■■□□ 2.16
CCDC12-210ENST00000604181 FAM9AQ8IZU1 332 aaPredicted RBP28.53■■■□□ 2.16
CCDC12-210ENST00000604181 RANGAP1P46060 587 aaPredicted RBP28.52■■■□□ 2.16
CCDC12-210ENST00000604181 FHOD3Q2V2M9 1422 aa28.52■■■□□ 2.16
CCDC12-210ENST00000604181 FRMPD1Q5SYB0 1578 aa28.5■■■□□ 2.15
CCDC12-210ENST00000604181 PHLDB1Q86UU1 1377 aa28.5■■■□□ 2.15
CCDC12-210ENST00000604181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.49■■■□□ 2.15
CCDC12-210ENST00000604181 HNRNPUL2Q1KMD3 747 aaKnown RBP28.49■■■□□ 2.15
CCDC12-210ENST00000604181 NEO1Q92859 1461 aa28.48■■■□□ 2.15
CCDC12-210ENST00000604181 ADAMTSL3P82987 1691 aa28.46■■■□□ 2.15
CCDC12-210ENST00000604181 EEA1Q15075 1411 aa28.42■■■□□ 2.14
CCDC12-210ENST00000604181 PTPRMP28827 1452 aa28.41■■■□□ 2.14
CCDC12-210ENST00000604181 BCORL1Q5H9F3 1711 aa28.36■■■□□ 2.13
CCDC12-210ENST00000604181 MADDQ8WXG6 1647 aa28.33■■■□□ 2.13
CCDC12-210ENST00000604181 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCDC12-210ENST00000604181 RICTORQ6R327 1708 aa28.32■■■□□ 2.12
CCDC12-210ENST00000604181 PLEKHD1A6NEE1 506 aa28.32■■■□□ 2.12
CCDC12-210ENST00000604181 TTC37Q6PGP7 1564 aa28.3■■■□□ 2.12
CCDC12-210ENST00000604181 ARHGEF40Q8TER5 1519 aa28.3■■■□□ 2.12
CCDC12-210ENST00000604181 AKNAQ7Z591 1439 aa28.3■■■□□ 2.12
CCDC12-210ENST00000604181 DENND4BO75064 1496 aaPredicted RBP28.29■■■□□ 2.12
CCDC12-210ENST00000604181 ARID4BQ4LE39 1312 aaPredicted RBP28.29■■■□□ 2.12
CCDC12-210ENST00000604181 FANCAO15360 1455 aa28.28■■■□□ 2.12
CCDC12-210ENST00000604181 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
CCDC12-210ENST00000604181 CDK13Q14004 1512 aaKnown RBP28.28■■■□□ 2.12
CCDC12-210ENST00000604181 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
CCDC12-210ENST00000604181 CFAP74Q9C0B2 1584 aa28.2■■■□□ 2.11
CCDC12-210ENST00000604181 RIMS1Q86UR5 1692 aaKnown RBP28.2■■■□□ 2.11
CCDC12-210ENST00000604181 YEATS2Q9ULM3 1422 aa28.2■■■□□ 2.11
CCDC12-210ENST00000604181 LMTK3Q96Q04 1460 aa28.2■■■□□ 2.1
CCDC12-210ENST00000604181 PCF11O94913 1555 aaKnown RBP28.2■■■□□ 2.1
CCDC12-210ENST00000604181 ZMYM4Q5VZL5 1548 aa28.19■■■□□ 2.1
CCDC12-210ENST00000604181 EHMT2Q96KQ7 1210 aa28.19■■■□□ 2.1
CCDC12-210ENST00000604181 ZFYVE16Q7Z3T8 1539 aa28.13■■■□□ 2.09
CCDC12-210ENST00000604181 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
CCDC12-210ENST00000604181 PLCH2O75038 1416 aa28.11■■■□□ 2.09
CCDC12-210ENST00000604181 FBXO41Q8TF61 875 aa28.11■■■□□ 2.09
CCDC12-210ENST00000604181 SCAPERQ9BY12 1400 aa28.09■■■□□ 2.09
CCDC12-210ENST00000604181 ARHGAP35Q9NRY4 1499 aa28.09■■■□□ 2.09
CCDC12-210ENST00000604181 PLPPR3Q6T4P5 718 aa28.08■■■□□ 2.09
CCDC12-210ENST00000604181 POGZQ7Z3K3 1410 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms