RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 NISCHQ9Y2I1 1504 aa42.77■■■■■ 4.44
CCDC12-210ENST00000604181 ABCC9O60706 1549 aa38.73■■■■□ 3.79
CCDC12-210ENST00000604181 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
CCDC12-210ENST00000604181 RB1CC1Q8TDY2 1594 aa36.66■■■■□ 3.46
CCDC12-210ENST00000604181 DNAJC5BQ9UF47 199 aa36.63■■■■□ 3.45
CCDC12-210ENST00000604181 NACADO15069 1562 aa36.36■■■■□ 3.41
CCDC12-210ENST00000604181 DCAF8L2P0C7V8 631 aa36.18■■■■□ 3.38
CCDC12-210ENST00000604181 PABPN1Q86U42 306 aaKnown RBP eCLIP36.05■■■■□ 3.36
CCDC12-210ENST00000604181 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
CCDC12-210ENST00000604181 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
CCDC12-210ENST00000604181 BICRAQ9NZM4 1560 aa35.73■■■■□ 3.31
CCDC12-210ENST00000604181 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
CCDC12-210ENST00000604181 DCAF1Q9Y4B6 1507 aa35.26■■■■□ 3.23
CCDC12-210ENST00000604181 SCRIBQ14160 1630 aa35.07■■■■□ 3.21
CCDC12-210ENST00000604181 SHROOM4Q9ULL8 1493 aa35.05■■■■□ 3.2
CCDC12-210ENST00000604181 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.19
CCDC12-210ENST00000604181 CECR2Q9BXF3 1484 aa34.88■■■■□ 3.17
CCDC12-210ENST00000604181 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
CCDC12-210ENST00000604181 DNAJC5Q9H3Z4 198 aa33.67■■■□□ 2.98
CCDC12-210ENST00000604181 NCAPD3P42695 1498 aa33.62■■■□□ 2.97
CCDC12-210ENST00000604181 ATAD2BQ9ULI0 1458 aa33.51■■■□□ 2.96
CCDC12-210ENST00000604181 SMARCA4P51532 1647 aa33.41■■■□□ 2.94
CCDC12-210ENST00000604181 CUX2O14529 1486 aa33.38■■■□□ 2.93
CCDC12-210ENST00000604181 ERCC6Q03468 1493 aa33.37■■■□□ 2.93
CCDC12-210ENST00000604181 SMARCA2P51531 1590 aa33.33■■■□□ 2.93
CCDC12-210ENST00000604181 HMGXB3Q12766 1538 aa33.33■■■□□ 2.93
CCDC12-210ENST00000604181 NESP48681 1621 aa33.25■■■□□ 2.91
CCDC12-210ENST00000604181 BAZ1AQ9NRL2 1556 aaPredicted RBP33.16■■■□□ 2.9
CCDC12-210ENST00000604181 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
CCDC12-210ENST00000604181 PEG3Q9GZU2 1588 aa33.07■■■□□ 2.88
CCDC12-210ENST00000604181 MROH2BQ7Z745 1585 aa33.01■■■□□ 2.88
CCDC12-210ENST00000604181 THOC2Q8NI27 1593 aaKnown RBP32.92■■■□□ 2.86
CCDC12-210ENST00000604181 LAMC3Q9Y6N6 1575 aa32.86■■■□□ 2.85
CCDC12-210ENST00000604181 KIF21AQ7Z4S6 1674 aa32.77■■■□□ 2.84
CCDC12-210ENST00000604181 PDS5BQ9NTI5 1447 aa32.66■■■□□ 2.82
CCDC12-210ENST00000604181 WIZO95785 1651 aa32.59■■■□□ 2.81
CCDC12-210ENST00000604181 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
CCDC12-210ENST00000604181 MRC2Q9UBG0 1479 aa32.43■■■□□ 2.78
CCDC12-210ENST00000604181 WDR62O43379 1518 aa32.38■■■□□ 2.77
CCDC12-210ENST00000604181 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
CCDC12-210ENST00000604181 FANCD2Q9BXW9 1451 aa32.23■■■□□ 2.75
CCDC12-210ENST00000604181 RSF1Q96T23 1441 aaPredicted RBP32.22■■■□□ 2.75
CCDC12-210ENST00000604181 CFTRP13569 1480 aa32.18■■■□□ 2.74
CCDC12-210ENST00000604181 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
CCDC12-210ENST00000604181 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
CCDC12-210ENST00000604181 URB2Q14146 1524 aaKnown RBP32.03■■■□□ 2.72
CCDC12-210ENST00000604181 OSCARQ8IYS5 282 aa31.82■■■□□ 2.68
CCDC12-210ENST00000604181 PRDM2Q13029 1718 aa31.79■■■□□ 2.68
CCDC12-210ENST00000604181 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
CCDC12-210ENST00000604181 ZNF608Q9ULD9 1512 aaPredicted RBP31.69■■■□□ 2.66
CCDC12-210ENST00000604181 TOPBP1Q92547 1522 aa31.61■■■□□ 2.65
CCDC12-210ENST00000604181 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
CCDC12-210ENST00000604181 RIMBP3CA6NJZ7 1639 aa31.5■■■□□ 2.63
CCDC12-210ENST00000604181 RIMBP3BA6NNM3 1639 aa31.5■■■□□ 2.63
CCDC12-210ENST00000604181 RIMBP3Q9UFD9 1639 aa31.5■■■□□ 2.63
CCDC12-210ENST00000604181 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
CCDC12-210ENST00000604181 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
CCDC12-210ENST00000604181 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
CCDC12-210ENST00000604181 ARHGEF11O15085 1522 aa31.38■■■□□ 2.61
CCDC12-210ENST00000604181 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
CCDC12-210ENST00000604181 AQRO60306 1485 aaKnown RBP eCLIP31.34■■■□□ 2.617e-7■■□□□ 14.5
CCDC12-210ENST00000604181 POLA1P09884 1462 aaPredicted RBP31.28■■■□□ 2.6
CCDC12-210ENST00000604181 CHD1O14646 1710 aa31.26■■■□□ 2.59
CCDC12-210ENST00000604181 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
CCDC12-210ENST00000604181 CYB5RLQ6IPT4 315 aa31.15■■■□□ 2.58
CCDC12-210ENST00000604181 FBLN2P98095 1184 aa31.12■■■□□ 2.57
CCDC12-210ENST00000604181 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
CCDC12-210ENST00000604181 SOGA1O94964 1423 aa31.1■■■□□ 2.57
CCDC12-210ENST00000604181 ARAP1Q96P48 1450 aa31.09■■■□□ 2.57
CCDC12-210ENST00000604181 FGD5Q6ZNL6 1462 aa31.04■■■□□ 2.56
CCDC12-210ENST00000604181 CUX1P39880 1505 aa31.02■■■□□ 2.56
CCDC12-210ENST00000604181 SNAPC4Q5SXM2 1469 aa31■■■□□ 2.55
CCDC12-210ENST00000604181 CLASP1Q7Z460 1538 aa30.9■■■□□ 2.54
CCDC12-210ENST00000604181 WDR97A6NE52 1622 aa30.9■■■□□ 2.54
CCDC12-210ENST00000604181 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
CCDC12-210ENST00000604181 GRIN2BQ13224 1484 aa30.83■■■□□ 2.53
CCDC12-210ENST00000604181 TRHP20396 242 aaPredicted RBP30.83■■■□□ 2.53
CCDC12-210ENST00000604181 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
CCDC12-210ENST00000604181 SYNJ1O43426 1573 aa30.78■■■□□ 2.52
CCDC12-210ENST00000604181 SYNJ2O15056 1496 aa30.76■■■□□ 2.52
CCDC12-210ENST00000604181 PBRM1Q86U86 1689 aa30.71■■■□□ 2.51
CCDC12-210ENST00000604181 GAPVD1Q14C86 1478 aa30.71■■■□□ 2.51
CCDC12-210ENST00000604181 ABCA10Q8WWZ4 1543 aa30.66■■■□□ 2.5
CCDC12-210ENST00000604181 ABCA5Q8WWZ7 1642 aa30.65■■■□□ 2.5
CCDC12-210ENST00000604181 SUPT5HO00267 1087 aaKnown RBP30.62■■■□□ 2.49
CCDC12-210ENST00000604181 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
CCDC12-210ENST00000604181 GRIN2AQ12879 1464 aa30.46■■■□□ 2.47
CCDC12-210ENST00000604181 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
CCDC12-210ENST00000604181 ADAMTS12P58397 1594 aa30.43■■■□□ 2.46
CCDC12-210ENST00000604181 CEP170Q5SW79 1584 aa30.41■■■□□ 2.46
CCDC12-210ENST00000604181 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
CCDC12-210ENST00000604181 BIVM-ERCC5R4GMW8 1640 aa30.4■■■□□ 2.46
CCDC12-210ENST00000604181 NUP160Q12769 1436 aa30.39■■■□□ 2.45
CCDC12-210ENST00000604181 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
CCDC12-210ENST00000604181 SHROOM2Q13796 1616 aa30.27■■■□□ 2.44
CCDC12-210ENST00000604181 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
CCDC12-210ENST00000604181 PRG4Q92954 1404 aaPredicted RBP30.1■■■□□ 2.41
CCDC12-210ENST00000604181 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
CCDC12-210ENST00000604181 AEBP2Q6ZN18 517 aaPredicted RBP30.03■■■□□ 2.4
CCDC12-210ENST00000604181 RUSC2Q8N2Y8 1516 aa30.01■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms