RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
RNF40-212ENST00000602784 SHROOM2Q13796 1616 aa22.99■■□□□ 1.27
RNF40-212ENST00000602784 RIMBP3CA6NJZ7 1639 aa22.98■■□□□ 1.27
RNF40-212ENST00000602784 RIMBP3BA6NNM3 1639 aa22.98■■□□□ 1.27
RNF40-212ENST00000602784 RIMBP3Q9UFD9 1639 aa22.98■■□□□ 1.27
RNF40-212ENST00000602784 KIF21BO75037 1637 aa22.93■■□□□ 1.26
RNF40-212ENST00000602784 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
RNF40-212ENST00000602784 PRG4Q92954 1404 aaPredicted RBP22.89■■□□□ 1.25
RNF40-212ENST00000602784 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
RNF40-212ENST00000602784 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
RNF40-212ENST00000602784 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
RNF40-212ENST00000602784 UGGT2Q9NYU1 1516 aa22.82■■□□□ 1.24
RNF40-212ENST00000602784 CYB5RLQ6IPT4 315 aa22.81■■□□□ 1.24
RNF40-212ENST00000602784 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
RNF40-212ENST00000602784 CARMIL2Q6F5E8 1435 aa22.79■■□□□ 1.24
RNF40-212ENST00000602784 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
RNF40-212ENST00000602784 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
RNF40-212ENST00000602784 TNIKQ9UKE5 1360 aa22.69■■□□□ 1.22
RNF40-212ENST00000602784 KIAA0556O60303 1618 aa22.67■■□□□ 1.22
RNF40-212ENST00000602784 PTPRGP23470 1445 aa22.66■■□□□ 1.22
RNF40-212ENST00000602784 EHMT2Q96KQ7 1210 aa22.66■■□□□ 1.22
RNF40-212ENST00000602784 SAMD9Q5K651 1589 aa22.6■■□□□ 1.21
RNF40-212ENST00000602784 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
RNF40-212ENST00000602784 RANGAP1P46060 587 aaPredicted RBP22.53■■□□□ 1.2
RNF40-212ENST00000602784 TTBK1Q5TCY1 1321 aaPredicted RBP22.53■■□□□ 1.2
RNF40-212ENST00000602784 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
RNF40-212ENST00000602784 UACAQ9BZF9 1416 aa22.51■■□□□ 1.19
RNF40-212ENST00000602784 UHRF1BP1LA0JNW5 1464 aa22.51■■□□□ 1.19
RNF40-212ENST00000602784 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
RNF40-212ENST00000602784 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
RNF40-212ENST00000602784 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
RNF40-212ENST00000602784 ABCC2Q92887 1545 aa22.46■■□□□ 1.19
RNF40-212ENST00000602784 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
RNF40-212ENST00000602784 FHOD3Q2V2M9 1422 aa22.45■■□□□ 1.18
RNF40-212ENST00000602784 ABCA8O94911 1581 aa22.44■■□□□ 1.18
RNF40-212ENST00000602784 PLB1Q6P1J6 1458 aa22.44■■□□□ 1.18
RNF40-212ENST00000602784 CLIP1P30622 1438 aa22.4■■□□□ 1.18
RNF40-212ENST00000602784 KDM5BQ9UGL1 1544 aa22.38■■□□□ 1.17
RNF40-212ENST00000602784 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
RNF40-212ENST00000602784 MAPKBP1O60336 1514 aa22.36■■□□□ 1.17
RNF40-212ENST00000602784 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
RNF40-212ENST00000602784 CEP162Q5TB80 1403 aa22.33■■□□□ 1.17
RNF40-212ENST00000602784 ZCCHC11Q5TAX3 1644 aaKnown RBP22.29■■□□□ 1.16
RNF40-212ENST00000602784 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
RNF40-212ENST00000602784 ATP10BO94823 1461 aa22.27■■□□□ 1.16
RNF40-212ENST00000602784 ASXL2Q76L83 1435 aa22.25■■□□□ 1.15
RNF40-212ENST00000602784 TRHP20396 242 aaPredicted RBP22.25■■□□□ 1.15
RNF40-212ENST00000602784 ABCC10Q5T3U5 1492 aa22.22■■□□□ 1.15
RNF40-212ENST00000602784 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
RNF40-212ENST00000602784 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
RNF40-212ENST00000602784 WDR7Q9Y4E6 1490 aa22.18■■□□□ 1.14
RNF40-212ENST00000602784 ARID3CA6NKF2 412 aa22.18■■□□□ 1.14
RNF40-212ENST00000602784 FAM69CQ0P6D2 419 aa22.16■■□□□ 1.14
RNF40-212ENST00000602784 DIP2BQ9P265 1576 aa22.16■■□□□ 1.14
RNF40-212ENST00000602784 EPRSP07814 1512 aaKnown RBP22.16■■□□□ 1.14
RNF40-212ENST00000602784 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
RNF40-212ENST00000602784 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
RNF40-212ENST00000602784 PCF11O94913 1555 aaKnown RBP22.14■■□□□ 1.13
RNF40-212ENST00000602784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.14■■□□□ 1.13
RNF40-212ENST00000602784 HNRNPUL2Q1KMD3 747 aaKnown RBP22.14■■□□□ 1.13
RNF40-212ENST00000602784 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
RNF40-212ENST00000602784 GLI2P10070 1586 aa22.12■■□□□ 1.13
RNF40-212ENST00000602784 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
RNF40-212ENST00000602784 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
RNF40-212ENST00000602784 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
RNF40-212ENST00000602784 CDK11AQ9UQ88 783 aaPredicted RBP22.09■■□□□ 1.13
RNF40-212ENST00000602784 VPS8Q8N3P4 1428 aa22.07■■□□□ 1.12
RNF40-212ENST00000602784 KCNH8Q96L42 1107 aa22.06■■□□□ 1.12
RNF40-212ENST00000602784 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
RNF40-212ENST00000602784 MAP3K4Q9Y6R4 1608 aa22■■□□□ 1.11
RNF40-212ENST00000602784 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
RNF40-212ENST00000602784 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
RNF40-212ENST00000602784 ABCA9Q8IUA7 1624 aa21.97■■□□□ 1.11
RNF40-212ENST00000602784 CD109Q6YHK3 1445 aa21.96■■□□□ 1.11
RNF40-212ENST00000602784 MAGI3Q5TCQ9 1506 aa21.93■■□□□ 1.1
RNF40-212ENST00000602784 TEX14Q8IWB6 1497 aa21.91■■□□□ 1.1
RNF40-212ENST00000602784 TSPOAP1O95153 1857 aa21.91■■□□□ 1.1
RNF40-212ENST00000602784 PPRC1Q5VV67 1664 aaKnown RBP21.91■■□□□ 1.1
RNF40-212ENST00000602784 MAP3K1Q13233 1512 aa21.9■■□□□ 1.1
RNF40-212ENST00000602784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.9■■□□□ 1.1
RNF40-212ENST00000602784 KIF14Q15058 1648 aa21.89■■□□□ 1.09
RNF40-212ENST00000602784 MTUS2Q5JR59 1369 aa21.87■■□□□ 1.09
RNF40-212ENST00000602784 TIAM1Q13009 1591 aa21.87■■□□□ 1.09
RNF40-212ENST00000602784 TTC37Q6PGP7 1564 aa21.85■■□□□ 1.09
RNF40-212ENST00000602784 APLP2Q06481 763 aa21.83■■□□□ 1.09
RNF40-212ENST00000602784 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
RNF40-212ENST00000602784 PLCH2O75038 1416 aa21.82■■□□□ 1.08
RNF40-212ENST00000602784 EHBP1L1Q8N3D4 1523 aa21.82■■□□□ 1.08
RNF40-212ENST00000602784 ARAP3Q8WWN8 1544 aa21.8■■□□□ 1.08
RNF40-212ENST00000602784 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
RNF40-212ENST00000602784 NEO1Q92859 1461 aa21.79■■□□□ 1.08
RNF40-212ENST00000602784 MYO5CQ9NQX4 1742 aa21.77■■□□□ 1.08
RNF40-212ENST00000602784 FANCAO15360 1455 aa21.76■■□□□ 1.07
RNF40-212ENST00000602784 KDM6BO15054 1643 aa21.75■■□□□ 1.07
RNF40-212ENST00000602784 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
RNF40-212ENST00000602784 KANK4Q5T7N3 995 aaPredicted RBP21.74■■□□□ 1.07
RNF40-212ENST00000602784 EFCAB2Q5VUJ9 269 aa21.74■■□□□ 1.07
RNF40-212ENST00000602784 CCNB3Q8WWL7 1395 aa21.72■■□□□ 1.07
RNF40-212ENST00000602784 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
RNF40-212ENST00000602784 AKNAQ7Z591 1439 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms