RNA–Protein interactions for RNA: ENST00000602710.5

UBE2E3-209, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-209ENST00000602710 CTTNBP2Q8WZ74 1663 aa30.8■■■□□ 2.52
UBE2E3-209ENST00000602710 NUP160Q12769 1436 aa30.79■■■□□ 2.52
UBE2E3-209ENST00000602710 RANGAP1P46060 587 aaPredicted RBP30.73■■■□□ 2.51
UBE2E3-209ENST00000602710 KIAA0586Q9BVV6 1533 aa30.71■■■□□ 2.51
UBE2E3-209ENST00000602710 IQGAP2Q13576 1575 aa30.67■■■□□ 2.5
UBE2E3-209ENST00000602710 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
UBE2E3-209ENST00000602710 OSCARQ8IYS5 282 aa30.62■■■□□ 2.49
UBE2E3-209ENST00000602710 DNAJC5Q9H3Z4 198 aa30.61■■■□□ 2.49
UBE2E3-209ENST00000602710 CLASP1Q7Z460 1538 aa30.58■■■□□ 2.49
UBE2E3-209ENST00000602710 CLIP1P30622 1438 aa30.57■■■□□ 2.48
UBE2E3-209ENST00000602710 JPH4Q96JJ6 628 aa30.55■■■□□ 2.48
UBE2E3-209ENST00000602710 UGGT2Q9NYU1 1516 aa30.52■■■□□ 2.48
UBE2E3-209ENST00000602710 ARHGAP35Q9NRY4 1499 aa30.5■■■□□ 2.47
UBE2E3-209ENST00000602710 P3H3Q8IVL6 736 aa30.47■■■□□ 2.47
UBE2E3-209ENST00000602710 SHROOM2Q13796 1616 aa30.45■■■□□ 2.47
UBE2E3-209ENST00000602710 SAMD9Q5K651 1589 aa30.45■■■□□ 2.46
UBE2E3-209ENST00000602710 EFCAB5A4FU69 1503 aa30.43■■■□□ 2.46
UBE2E3-209ENST00000602710 DISP1Q96F81 1524 aa30.42■■■□□ 2.46
UBE2E3-209ENST00000602710 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
UBE2E3-209ENST00000602710 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
UBE2E3-209ENST00000602710 FHOD3Q2V2M9 1422 aa30.37■■■□□ 2.45
UBE2E3-209ENST00000602710 KIAA0556O60303 1618 aa30.37■■■□□ 2.45
UBE2E3-209ENST00000602710 CARMIL2Q6F5E8 1435 aa30.33■■■□□ 2.45
UBE2E3-209ENST00000602710 ERCC6L2Q5T890 1561 aa30.33■■■□□ 2.45
UBE2E3-209ENST00000602710 TTBK1Q5TCY1 1321 aaPredicted RBP30.26■■■□□ 2.43
UBE2E3-209ENST00000602710 VPS8Q8N3P4 1428 aa30.2■■■□□ 2.42
UBE2E3-209ENST00000602710 FMN1Q68DA7 1419 aa30.15■■■□□ 2.42
UBE2E3-209ENST00000602710 PTPRGP23470 1445 aa30.13■■■□□ 2.41
UBE2E3-209ENST00000602710 ARHGEF11O15085 1522 aa30.1■■■□□ 2.41
UBE2E3-209ENST00000602710 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
UBE2E3-209ENST00000602710 PLB1Q6P1J6 1458 aa30.05■■■□□ 2.4
UBE2E3-209ENST00000602710 ATP1B4Q9UN42 357 aaPredicted RBP30.04■■■□□ 2.4
UBE2E3-209ENST00000602710 CASKIN1Q8WXD9 1431 aa30.04■■■□□ 2.4
UBE2E3-209ENST00000602710 RIMBP3CA6NJZ7 1639 aa30.03■■■□□ 2.4
UBE2E3-209ENST00000602710 RIMBP3BA6NNM3 1639 aa30.03■■■□□ 2.4
UBE2E3-209ENST00000602710 RIMBP3Q9UFD9 1639 aa30.03■■■□□ 2.4
UBE2E3-209ENST00000602710 RAPGEF6Q8TEU7 1601 aa29.99■■■□□ 2.39
UBE2E3-209ENST00000602710 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
UBE2E3-209ENST00000602710 ABCA8O94911 1581 aa29.99■■■□□ 2.39
UBE2E3-209ENST00000602710 UACAQ9BZF9 1416 aa29.94■■■□□ 2.38
UBE2E3-209ENST00000602710 HECW1Q76N89 1606 aa29.92■■■□□ 2.38
UBE2E3-209ENST00000602710 LRRIQ1Q96JM4 1722 aa29.92■■■□□ 2.38
UBE2E3-209ENST00000602710 NUP153P49790 1475 aaKnown RBP29.91■■■□□ 2.38
UBE2E3-209ENST00000602710 ARID3CA6NKF2 412 aa29.91■■■□□ 2.38
UBE2E3-209ENST00000602710 APLP2Q06481 763 aa29.87■■■□□ 2.37
UBE2E3-209ENST00000602710 ABCC2Q92887 1545 aa29.86■■■□□ 2.37
UBE2E3-209ENST00000602710 CYB5RLQ6IPT4 315 aa29.86■■■□□ 2.37
UBE2E3-209ENST00000602710 EPRSP07814 1512 aaKnown RBP29.85■■■□□ 2.37
UBE2E3-209ENST00000602710 UHRF1BP1LA0JNW5 1464 aa29.83■■■□□ 2.37
UBE2E3-209ENST00000602710 CDK13Q14004 1512 aaKnown RBP29.83■■■□□ 2.37
UBE2E3-209ENST00000602710 PPARGC1BQ86YN6 1023 aaKnown RBP29.82■■■□□ 2.36
UBE2E3-209ENST00000602710 ADCY10Q96PN6 1610 aa29.82■■■□□ 2.36
UBE2E3-209ENST00000602710 TIAM1Q13009 1591 aa29.8■■■□□ 2.36
UBE2E3-209ENST00000602710 CCDC18Q5T9S5 1454 aa29.79■■■□□ 2.36
UBE2E3-209ENST00000602710 ATP10BO94823 1461 aa29.78■■■□□ 2.36
UBE2E3-209ENST00000602710 CFAP43Q8NDM7 1665 aa29.78■■■□□ 2.36
UBE2E3-209ENST00000602710 MAP3K1Q13233 1512 aa29.77■■■□□ 2.36
UBE2E3-209ENST00000602710 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.77■■■□□ 2.36
UBE2E3-209ENST00000602710 HNRNPUL2Q1KMD3 747 aaKnown RBP29.77■■■□□ 2.36
UBE2E3-209ENST00000602710 KANK4Q5T7N3 995 aaPredicted RBP29.76■■■□□ 2.35
UBE2E3-209ENST00000602710 KDM5BQ9UGL1 1544 aa29.71■■■□□ 2.35
UBE2E3-209ENST00000602710 ZCCHC11Q5TAX3 1644 aaKnown RBP29.69■■■□□ 2.34
UBE2E3-209ENST00000602710 LRRC9Q6ZRR7 1453 aa29.68■■■□□ 2.34
UBE2E3-209ENST00000602710 MAGI3Q5TCQ9 1506 aa29.66■■■□□ 2.34
UBE2E3-209ENST00000602710 MTUS2Q5JR59 1369 aa29.63■■■□□ 2.33
UBE2E3-209ENST00000602710 CDK11AQ9UQ88 783 aaPredicted RBP29.62■■■□□ 2.33
UBE2E3-209ENST00000602710 NPM1P06748 294 aaKnown RBP eCLIP29.6■■■□□ 2.33
UBE2E3-209ENST00000602710 PLEKHD1A6NEE1 506 aa29.59■■■□□ 2.33
UBE2E3-209ENST00000602710 EHBP1L1Q8N3D4 1523 aa29.56■■■□□ 2.32
UBE2E3-209ENST00000602710 TROQ12816 1431 aaPredicted RBP29.54■■■□□ 2.32
UBE2E3-209ENST00000602710 ASXL2Q76L83 1435 aa29.49■■■□□ 2.31
UBE2E3-209ENST00000602710 SUPT6HQ7KZ85 1726 aaKnown RBP29.46■■■□□ 2.31
UBE2E3-209ENST00000602710 KIF14Q15058 1648 aa29.45■■■□□ 2.31
UBE2E3-209ENST00000602710 KCNH8Q96L42 1107 aa29.45■■■□□ 2.31
UBE2E3-209ENST00000602710 WDR7Q9Y4E6 1490 aa29.45■■■□□ 2.3
UBE2E3-209ENST00000602710 NCOA2Q15596 1464 aa29.44■■■□□ 2.3
UBE2E3-209ENST00000602710 MAPKBP1O60336 1514 aa29.4■■■□□ 2.3
UBE2E3-209ENST00000602710 PHLDB1Q86UU1 1377 aa29.39■■■□□ 2.3
UBE2E3-209ENST00000602710 ABCC10Q5T3U5 1492 aa29.34■■■□□ 2.29
UBE2E3-209ENST00000602710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.33■■■□□ 2.29
UBE2E3-209ENST00000602710 TTC37Q6PGP7 1564 aa29.29■■■□□ 2.28
UBE2E3-209ENST00000602710 CCNB3Q8WWL7 1395 aa29.29■■■□□ 2.28
UBE2E3-209ENST00000602710 MYOM3Q5VTT5 1437 aa29.27■■■□□ 2.28
UBE2E3-209ENST00000602710 GPATCH8Q9UKJ3 1502 aaKnown RBP29.25■■■□□ 2.27
UBE2E3-209ENST00000602710 CDC42BPAQ5VT25 1732 aa29.24■■■□□ 2.27
UBE2E3-209ENST00000602710 ABCA9Q8IUA7 1624 aa29.22■■■□□ 2.27
UBE2E3-209ENST00000602710 FGD6Q6ZV73 1430 aa29.2■■■□□ 2.26
UBE2E3-209ENST00000602710 TRIM26Q12899 539 aaPredicted RBP29.19■■■□□ 2.26
UBE2E3-209ENST00000602710 ITSN2Q9NZM3 1697 aa29.18■■■□□ 2.26
UBE2E3-209ENST00000602710 RRBP1Q9P2E9 1410 aaKnown RBP29.18■■■□□ 2.26
UBE2E3-209ENST00000602710 MYO5CQ9NQX4 1742 aa29.18■■■□□ 2.26
UBE2E3-209ENST00000602710 DIP2BQ9P265 1576 aa29.18■■■□□ 2.26
UBE2E3-209ENST00000602710 CFDP1Q9UEE9 299 aaPredicted RBP29.17■■■□□ 2.26
UBE2E3-209ENST00000602710 CDC42BPBQ9Y5S2 1711 aa29.16■■■□□ 2.26
UBE2E3-209ENST00000602710 PREX2Q70Z35 1606 aa29.16■■■□□ 2.26
UBE2E3-209ENST00000602710 FAM69CQ0P6D2 419 aa29.16■■■□□ 2.26
UBE2E3-209ENST00000602710 GLI2P10070 1586 aa29.14■■■□□ 2.26
UBE2E3-209ENST00000602710 PLCH2O75038 1416 aa29.14■■■□□ 2.26
UBE2E3-209ENST00000602710 MIA2Q96PC5 1412 aa29.14■■■□□ 2.26
UBE2E3-209ENST00000602710 PTPN23Q9H3S7 1636 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms