RNA–Protein interactions for RNA: ENST00000602351.5

PPFIA3-203, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 5 BASIC

Gene PPFIA3, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-203ENST00000602351 MTUS2Q5JR59 1369 aa20.72■□□□□ 0.91
PPFIA3-203ENST00000602351 SUPT16HQ9Y5B9 1047 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-203ENST00000602351 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
PPFIA3-203ENST00000602351 KCNH8Q96L42 1107 aa20.71■□□□□ 0.91
PPFIA3-203ENST00000602351 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
PPFIA3-203ENST00000602351 RAD54L2Q9Y4B4 1467 aa20.67■□□□□ 0.9
PPFIA3-203ENST00000602351 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
PPFIA3-203ENST00000602351 RRP7BPQ9NSQ0 103 aa20.59■□□□□ 0.89
PPFIA3-203ENST00000602351 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
PPFIA3-203ENST00000602351 ANP32CO43423 234 aa20.55■□□□□ 0.88
PPFIA3-203ENST00000602351 TSHZ2Q9NRE2 1034 aa20.55■□□□□ 0.88
PPFIA3-203ENST00000602351 NPM1P06748 294 aaKnown RBP eCLIP20.54■□□□□ 0.88
PPFIA3-203ENST00000602351 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
PPFIA3-203ENST00000602351 CFTRP13569 1480 aa20.53■□□□□ 0.88
PPFIA3-203ENST00000602351 SYNJ1O43426 1573 aa20.52■□□□□ 0.88
PPFIA3-203ENST00000602351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.5■□□□□ 0.87
PPFIA3-203ENST00000602351 IGF1RP08069 1367 aa20.49■□□□□ 0.87
PPFIA3-203ENST00000602351 PLEKHD1A6NEE1 506 aa20.48■□□□□ 0.87
PPFIA3-203ENST00000602351 NBR1Q14596 966 aa20.47■□□□□ 0.87
PPFIA3-203ENST00000602351 AQRO60306 1485 aaKnown RBP eCLIP20.47■□□□□ 0.873e-9■■■■■ 38.1
PPFIA3-203ENST00000602351 DDX10Q13206 875 aaKnown RBP20.46■□□□□ 0.87
PPFIA3-203ENST00000602351 FHOD3Q2V2M9 1422 aa20.46■□□□□ 0.87
PPFIA3-203ENST00000602351 PLPPR3Q6T4P5 718 aa20.44■□□□□ 0.86
PPFIA3-203ENST00000602351 DAXXQ9UER7 740 aaPredicted RBP20.44■□□□□ 0.86
PPFIA3-203ENST00000602351 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
PPFIA3-203ENST00000602351 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
PPFIA3-203ENST00000602351 HIRIP3Q9BW71 556 aaPredicted RBP20.41■□□□□ 0.86
PPFIA3-203ENST00000602351 CFDP1Q9UEE9 299 aaPredicted RBP20.39■□□□□ 0.85
PPFIA3-203ENST00000602351 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
PPFIA3-203ENST00000602351 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
PPFIA3-203ENST00000602351 TSPY4P0CV99 314 aa20.37■□□□□ 0.85
PPFIA3-203ENST00000602351 TSPY10P0CW01 314 aa20.37■□□□□ 0.85
PPFIA3-203ENST00000602351 IRX6P78412 446 aaPredicted RBP20.37■□□□□ 0.85
PPFIA3-203ENST00000602351 RBM19Q9Y4C8 960 aaKnown RBP20.37■□□□□ 0.85
PPFIA3-203ENST00000602351 CUX1P39880 1505 aa20.37■□□□□ 0.85
PPFIA3-203ENST00000602351 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
PPFIA3-203ENST00000602351 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
PPFIA3-203ENST00000602351 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.84
PPFIA3-203ENST00000602351 ANP32AP39687 249 aaKnown RBP20.3■□□□□ 0.84
PPFIA3-203ENST00000602351 FHAD1B1AJZ9 1412 aa20.29■□□□□ 0.84
PPFIA3-203ENST00000602351 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
PPFIA3-203ENST00000602351 CHGAP10645 457 aaKnown RBP20.29■□□□□ 0.84
PPFIA3-203ENST00000602351 SIN3AQ96ST3 1273 aa20.27■□□□□ 0.84
PPFIA3-203ENST00000602351 CCNB3Q8WWL7 1395 aa20.25■□□□□ 0.83
PPFIA3-203ENST00000602351 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
PPFIA3-203ENST00000602351 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
PPFIA3-203ENST00000602351 KDM2AQ9Y2K7 1162 aa20.25■□□□□ 0.83
PPFIA3-203ENST00000602351 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
PPFIA3-203ENST00000602351 NPM2Q86SE8 214 aaKnown RBP20.21■□□□□ 0.83
PPFIA3-203ENST00000602351 DEKP35659 375 aaKnown RBP20.17■□□□□ 0.82
PPFIA3-203ENST00000602351 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
PPFIA3-203ENST00000602351 FOXD1Q16676 465 aa20.15■□□□□ 0.82
PPFIA3-203ENST00000602351 RGL3Q3MIN7 710 aa20.14■□□□□ 0.82
PPFIA3-203ENST00000602351 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.82
PPFIA3-203ENST00000602351 ZBTB47Q9UFB7 747 aaPredicted RBP20.13■□□□□ 0.81
PPFIA3-203ENST00000602351 FMN1Q68DA7 1419 aa20.13■□□□□ 0.81
PPFIA3-203ENST00000602351 CARMIL2Q6F5E8 1435 aa20.13■□□□□ 0.81
PPFIA3-203ENST00000602351 MRC2Q9UBG0 1479 aa20.09■□□□□ 0.81
PPFIA3-203ENST00000602351 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
PPFIA3-203ENST00000602351 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
PPFIA3-203ENST00000602351 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
PPFIA3-203ENST00000602351 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
PPFIA3-203ENST00000602351 ESF1Q9H501 851 aaKnown RBP20.04■□□□□ 0.8
PPFIA3-203ENST00000602351 URB2Q14146 1524 aaKnown RBP20.04■□□□□ 0.8
PPFIA3-203ENST00000602351 KIF21BO75037 1637 aa20.04■□□□□ 0.8
PPFIA3-203ENST00000602351 FAM9BQ8IZU0 186 aa20.03■□□□□ 0.8
PPFIA3-203ENST00000602351 HNRNPMP52272 730 aaKnown RBP eCLIP20.03■□□□□ 0.8
PPFIA3-203ENST00000602351 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
PPFIA3-203ENST00000602351 DNMBPQ6XZF7 1577 aa19.99■□□□□ 0.79
PPFIA3-203ENST00000602351 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
PPFIA3-203ENST00000602351 CCDC136Q96JN2 1154 aa19.98■□□□□ 0.79
PPFIA3-203ENST00000602351 ZNF644Q9H582 1327 aaPredicted RBP19.98■□□□□ 0.79
PPFIA3-203ENST00000602351 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
PPFIA3-203ENST00000602351 PTPRGP23470 1445 aa19.97■□□□□ 0.79
PPFIA3-203ENST00000602351 RAB3GAP2Q9H2M9 1393 aa19.96■□□□□ 0.79
PPFIA3-203ENST00000602351 LAMC3Q9Y6N6 1575 aa19.96■□□□□ 0.79
PPFIA3-203ENST00000602351 NOP58Q9Y2X3 529 aaKnown RBP19.95■□□□□ 0.79
PPFIA3-203ENST00000602351 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
PPFIA3-203ENST00000602351 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
PPFIA3-203ENST00000602351 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
PPFIA3-203ENST00000602351 MLECQ14165 292 aa19.93■□□□□ 0.78
PPFIA3-203ENST00000602351 NEFMP07197 916 aa19.92■□□□□ 0.78
PPFIA3-203ENST00000602351 B4GALNT3Q6L9W6 998 aa19.89■□□□□ 0.78
PPFIA3-203ENST00000602351 ARID4BQ4LE39 1312 aaPredicted RBP19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 SENP3-EIF4A1A0A087X0R7 540 aa19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 CANXP27824 592 aaKnown RBP19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 IFT140Q96RY7 1462 aa19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 EIF4G2P78344 907 aaKnown RBP eCLIP19.89■□□□□ 0.774e-8■■■■■ 37.9
PPFIA3-203ENST00000602351 PHLDB1Q86UU1 1377 aa19.89■□□□□ 0.77
PPFIA3-203ENST00000602351 PRKCSHP14314 528 aaPredicted RBP19.88■□□□□ 0.77
PPFIA3-203ENST00000602351 ABCA10Q8WWZ4 1543 aa19.87■□□□□ 0.77
PPFIA3-203ENST00000602351 GGT6Q6P531 493 aa19.87■□□□□ 0.77
PPFIA3-203ENST00000602351 PPP4R2Q9NY27 417 aa19.86■□□□□ 0.77
PPFIA3-203ENST00000602351 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.85■□□□□ 0.77
PPFIA3-203ENST00000602351 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
PPFIA3-203ENST00000602351 TMC1Q8TDI8 760 aa19.84■□□□□ 0.77
PPFIA3-203ENST00000602351 PKD2Q13563 968 aa19.84■□□□□ 0.77
PPFIA3-203ENST00000602351 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
PPFIA3-203ENST00000602351 EFCAB2Q5VUJ9 269 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms