RNA–Protein interactions for RNA: ENST00000602351.5

PPFIA3-203, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 5 BASIC

Gene PPFIA3, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-203ENST00000602351 NISCHQ9Y2I1 1504 aa28.04■■■□□ 2.08
PPFIA3-203ENST00000602351 DCAF8L2P0C7V8 631 aa26.76■■□□□ 1.87
PPFIA3-203ENST00000602351 SHROOM4Q9ULL8 1493 aa25.59■■□□□ 1.69
PPFIA3-203ENST00000602351 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
PPFIA3-203ENST00000602351 ABCC9O60706 1549 aa24.15■■□□□ 1.46
PPFIA3-203ENST00000602351 EHMT2Q96KQ7 1210 aa24.1■■□□□ 1.45
PPFIA3-203ENST00000602351 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
PPFIA3-203ENST00000602351 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
PPFIA3-203ENST00000602351 FAM9AQ8IZU1 332 aaPredicted RBP23.67■■□□□ 1.38
PPFIA3-203ENST00000602351 PABPN1Q86U42 306 aaKnown RBP eCLIP23.63■■□□□ 1.375e-6■■■■□ 22.2
PPFIA3-203ENST00000602351 HRCP23327 699 aa23.61■■□□□ 1.37
PPFIA3-203ENST00000602351 PPARGC1BQ86YN6 1023 aaKnown RBP23.32■■□□□ 1.32
PPFIA3-203ENST00000602351 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
PPFIA3-203ENST00000602351 CCDC180Q9P1Z9 1646 aa23.3■■□□□ 1.32
PPFIA3-203ENST00000602351 TRIM41Q8WV44 630 aa23.24■■□□□ 1.31
PPFIA3-203ENST00000602351 RANGAP1P46060 587 aaPredicted RBP23.11■■□□□ 1.29
PPFIA3-203ENST00000602351 MYT1Q01538 1121 aa23.09■■□□□ 1.29
PPFIA3-203ENST00000602351 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
PPFIA3-203ENST00000602351 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
PPFIA3-203ENST00000602351 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
PPFIA3-203ENST00000602351 APLP2Q06481 763 aa22.94■■□□□ 1.26
PPFIA3-203ENST00000602351 ZEB1P37275 1124 aaPredicted RBP22.9■■□□□ 1.26
PPFIA3-203ENST00000602351 LOC105371045A0A1W2PR82 267 aa22.84■■□□□ 1.25
PPFIA3-203ENST00000602351 CENPBP07199 599 aaPredicted RBP22.81■■□□□ 1.24
PPFIA3-203ENST00000602351 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
PPFIA3-203ENST00000602351 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
PPFIA3-203ENST00000602351 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
PPFIA3-203ENST00000602351 ATP1B4Q9UN42 357 aaPredicted RBP22.47■■□□□ 1.19
PPFIA3-203ENST00000602351 RB1CC1Q8TDY2 1594 aa22.46■■□□□ 1.19
PPFIA3-203ENST00000602351 YTHDC1Q96MU7 727 aaKnown RBP22.43■■□□□ 1.18
PPFIA3-203ENST00000602351 NACADO15069 1562 aa22.37■■□□□ 1.17
PPFIA3-203ENST00000602351 CECR2Q9BXF3 1484 aa22.29■■□□□ 1.16
PPFIA3-203ENST00000602351 RSF1Q96T23 1441 aaPredicted RBP22.26■■□□□ 1.15
PPFIA3-203ENST00000602351 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
PPFIA3-203ENST00000602351 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
PPFIA3-203ENST00000602351 DCAF1Q9Y4B6 1507 aa22.23■■□□□ 1.15
PPFIA3-203ENST00000602351 ACIN1Q9UKV3 1341 aaKnown RBP22.09■■□□□ 1.13
PPFIA3-203ENST00000602351 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
PPFIA3-203ENST00000602351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.98■■□□□ 1.11
PPFIA3-203ENST00000602351 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
PPFIA3-203ENST00000602351 NEUROD1Q13562 356 aa21.89■■□□□ 1.09
PPFIA3-203ENST00000602351 ITGAEP38570 1179 aa21.88■■□□□ 1.09
PPFIA3-203ENST00000602351 FBLN2P98095 1184 aa21.82■■□□□ 1.08
PPFIA3-203ENST00000602351 HNRNPUL2Q1KMD3 747 aaKnown RBP21.81■■□□□ 1.08
PPFIA3-203ENST00000602351 CSRNP3Q8WYN3 585 aa21.81■■□□□ 1.08
PPFIA3-203ENST00000602351 ERICH6Q7L0X2 663 aa21.8■■□□□ 1.08
PPFIA3-203ENST00000602351 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
PPFIA3-203ENST00000602351 P3H3Q8IVL6 736 aa21.76■■□□□ 1.07
PPFIA3-203ENST00000602351 BAZ1AQ9NRL2 1556 aaPredicted RBP21.75■■□□□ 1.07
PPFIA3-203ENST00000602351 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
PPFIA3-203ENST00000602351 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
PPFIA3-203ENST00000602351 WIZO95785 1651 aa21.63■■□□□ 1.05
PPFIA3-203ENST00000602351 NEFLP07196 543 aa21.54■■□□□ 1.04
PPFIA3-203ENST00000602351 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
PPFIA3-203ENST00000602351 WRNQ14191 1432 aaPredicted RBP eCLIP21.44■■□□□ 1.02
PPFIA3-203ENST00000602351 ZNF316A6NFI3 1004 aaPredicted RBP21.41■■□□□ 1.02
PPFIA3-203ENST00000602351 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
PPFIA3-203ENST00000602351 FAM50AQ14320 339 aaKnown RBP21.38■■□□□ 1.01
PPFIA3-203ENST00000602351 ATAD2BQ9ULI0 1458 aa21.34■■□□□ 1.01
PPFIA3-203ENST00000602351 BCANQ96GW7 911 aa21.33■■□□□ 1.01
PPFIA3-203ENST00000602351 SOGA1O94964 1423 aa21.32■■□□□ 1
PPFIA3-203ENST00000602351 SMARCA4P51532 1647 aa21.32■■□□□ 1
PPFIA3-203ENST00000602351 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
PPFIA3-203ENST00000602351 SMARCA2P51531 1590 aa21.22■□□□□ 0.99
PPFIA3-203ENST00000602351 TOP2AP11388 1531 aaKnown RBP21.21■□□□□ 0.99
PPFIA3-203ENST00000602351 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.98
PPFIA3-203ENST00000602351 CHMP7Q8WUX9 453 aaPredicted RBP21.11■□□□□ 0.97
PPFIA3-203ENST00000602351 MIER1Q8N108 512 aa21.1■□□□□ 0.97
PPFIA3-203ENST00000602351 ERCC6Q03468 1493 aa21.07■□□□□ 0.96
PPFIA3-203ENST00000602351 CLIP1P30622 1438 aa21.06■□□□□ 0.96
PPFIA3-203ENST00000602351 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
PPFIA3-203ENST00000602351 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
PPFIA3-203ENST00000602351 EIF4G1Q04637 1599 aaKnown RBP21.03■□□□□ 0.96
PPFIA3-203ENST00000602351 BICRAQ9NZM4 1560 aa21.03■□□□□ 0.96
PPFIA3-203ENST00000602351 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
PPFIA3-203ENST00000602351 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
PPFIA3-203ENST00000602351 ZNF777Q9ULD5 760 aaPredicted RBP21.02■□□□□ 0.96
PPFIA3-203ENST00000602351 BCL11AQ9H165 835 aa21.02■□□□□ 0.96
PPFIA3-203ENST00000602351 ANP32EQ9BTT0 268 aa21.01■□□□□ 0.95
PPFIA3-203ENST00000602351 TDRD9Q8NDG6 1382 aaKnown RBP21.01■□□□□ 0.95
PPFIA3-203ENST00000602351 CUX2O14529 1486 aa21.01■□□□□ 0.95
PPFIA3-203ENST00000602351 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
PPFIA3-203ENST00000602351 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
PPFIA3-203ENST00000602351 GOLGA3Q08378 1498 aa20.96■□□□□ 0.95
PPFIA3-203ENST00000602351 CNGB1Q14028 1251 aaPredicted RBP20.94■□□□□ 0.94
PPFIA3-203ENST00000602351 EEA1Q15075 1411 aa20.91■□□□□ 0.94
PPFIA3-203ENST00000602351 CLSPNQ9HAW4 1339 aa20.87■□□□□ 0.93
PPFIA3-203ENST00000602351 FKBP8Q14318 412 aa20.86■□□□□ 0.93
PPFIA3-203ENST00000602351 CARMIL1Q5VZK9 1371 aa20.86■□□□□ 0.93
PPFIA3-203ENST00000602351 TNIKQ9UKE5 1360 aa20.86■□□□□ 0.93
PPFIA3-203ENST00000602351 CHIC2Q9UKJ5 165 aa20.85■□□□□ 0.93
PPFIA3-203ENST00000602351 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
PPFIA3-203ENST00000602351 NCAPD3P42695 1498 aa20.84■□□□□ 0.93
PPFIA3-203ENST00000602351 PDS5BQ9NTI5 1447 aa20.83■□□□□ 0.93
PPFIA3-203ENST00000602351 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
PPFIA3-203ENST00000602351 NESP48681 1621 aa20.81■□□□□ 0.92
PPFIA3-203ENST00000602351 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
PPFIA3-203ENST00000602351 RTL5Q5HYW3 569 aaPredicted RBP20.78■□□□□ 0.92
PPFIA3-203ENST00000602351 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
PPFIA3-203ENST00000602351 CDK11AQ9UQ88 783 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms