RNA–Protein interactions for RNA: ENST00000602230.1

BRD4-211, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-211ENST00000602230 RIMBP3BA6NNM3 1639 aa21.8■■□□□ 1.08
BRD4-211ENST00000602230 RIMBP3Q9UFD9 1639 aa21.8■■□□□ 1.08
BRD4-211ENST00000602230 KIAA0586Q9BVV6 1533 aa21.79■■□□□ 1.08
BRD4-211ENST00000602230 JPH4Q96JJ6 628 aa21.77■■□□□ 1.08
BRD4-211ENST00000602230 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
BRD4-211ENST00000602230 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
BRD4-211ENST00000602230 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
BRD4-211ENST00000602230 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
BRD4-211ENST00000602230 KIF21BO75037 1637 aa21.66■■□□□ 1.06
BRD4-211ENST00000602230 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
BRD4-211ENST00000602230 ARAP1Q96P48 1450 aa21.64■■□□□ 1.05
BRD4-211ENST00000602230 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
BRD4-211ENST00000602230 CARMIL2Q6F5E8 1435 aa21.58■■□□□ 1.05
BRD4-211ENST00000602230 UGGT2Q9NYU1 1516 aa21.56■■□□□ 1.04
BRD4-211ENST00000602230 UBTFP17480 764 aaKnown RBP21.55■■□□□ 1.04
BRD4-211ENST00000602230 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
BRD4-211ENST00000602230 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
BRD4-211ENST00000602230 DISP1Q96F81 1524 aa21.5■■□□□ 1.03
BRD4-211ENST00000602230 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
BRD4-211ENST00000602230 PTPRGP23470 1445 aa21.46■■□□□ 1.03
BRD4-211ENST00000602230 KIAA0556O60303 1618 aa21.45■■□□□ 1.02
BRD4-211ENST00000602230 TTBK1Q5TCY1 1321 aaPredicted RBP21.44■■□□□ 1.02
BRD4-211ENST00000602230 RANGAP1P46060 587 aaPredicted RBP21.42■■□□□ 1.02
BRD4-211ENST00000602230 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
BRD4-211ENST00000602230 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
BRD4-211ENST00000602230 NPM1P06748 294 aaKnown RBP eCLIP21.33■■□□□ 1.01
BRD4-211ENST00000602230 EFCAB5A4FU69 1503 aa21.32■■□□□ 1
BRD4-211ENST00000602230 UACAQ9BZF9 1416 aa21.31■■□□□ 1
BRD4-211ENST00000602230 ADCY10Q96PN6 1610 aa21.29■■□□□ 1
BRD4-211ENST00000602230 UHRF1BP1LA0JNW5 1464 aa21.27■■□□□ 1
BRD4-211ENST00000602230 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
BRD4-211ENST00000602230 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
BRD4-211ENST00000602230 ABCC2Q92887 1545 aa21.24■□□□□ 0.99
BRD4-211ENST00000602230 PLB1Q6P1J6 1458 aa21.23■□□□□ 0.99
BRD4-211ENST00000602230 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
BRD4-211ENST00000602230 ABCA8O94911 1581 aa21.21■□□□□ 0.99
BRD4-211ENST00000602230 TRHP20396 242 aaPredicted RBP21.19■□□□□ 0.98
BRD4-211ENST00000602230 CLIP1P30622 1438 aa21.18■□□□□ 0.98
BRD4-211ENST00000602230 KDM5BQ9UGL1 1544 aa21.16■□□□□ 0.98
BRD4-211ENST00000602230 FMN1Q68DA7 1419 aa21.15■□□□□ 0.98
BRD4-211ENST00000602230 RAPGEF6Q8TEU7 1601 aa21.15■□□□□ 0.98
BRD4-211ENST00000602230 MAPKBP1O60336 1514 aa21.14■□□□□ 0.98
BRD4-211ENST00000602230 ZCCHC11Q5TAX3 1644 aaKnown RBP21.11■□□□□ 0.97
BRD4-211ENST00000602230 CEP162Q5TB80 1403 aa21.11■□□□□ 0.97
BRD4-211ENST00000602230 ARID3CA6NKF2 412 aa21.08■□□□□ 0.97
BRD4-211ENST00000602230 ASXL2Q76L83 1435 aa21.08■□□□□ 0.97
BRD4-211ENST00000602230 ATP10BO94823 1461 aa21.07■□□□□ 0.96
BRD4-211ENST00000602230 ATP1B4Q9UN42 357 aaPredicted RBP21.06■□□□□ 0.96
BRD4-211ENST00000602230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.05■□□□□ 0.96
BRD4-211ENST00000602230 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
BRD4-211ENST00000602230 NUP153P49790 1475 aaKnown RBP21.05■□□□□ 0.96
BRD4-211ENST00000602230 ABCC10Q5T3U5 1492 aa21.04■□□□□ 0.96
BRD4-211ENST00000602230 FAM69CQ0P6D2 419 aa21.03■□□□□ 0.96
BRD4-211ENST00000602230 HECW1Q76N89 1606 aa21■□□□□ 0.95
BRD4-211ENST00000602230 KIF13AQ9H1H9 1805 aa20.99■□□□□ 0.95
BRD4-211ENST00000602230 WDR7Q9Y4E6 1490 aa20.99■□□□□ 0.95
BRD4-211ENST00000602230 DIP2BQ9P265 1576 aa20.98■□□□□ 0.95
BRD4-211ENST00000602230 CASKIN1Q8WXD9 1431 aa20.98■□□□□ 0.95
BRD4-211ENST00000602230 PLEKHD1A6NEE1 506 aa20.96■□□□□ 0.95
BRD4-211ENST00000602230 KCNH8Q96L42 1107 aa20.96■□□□□ 0.95
BRD4-211ENST00000602230 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
BRD4-211ENST00000602230 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
BRD4-211ENST00000602230 FYCO1Q9BQS8 1478 aa20.93■□□□□ 0.94
BRD4-211ENST00000602230 GLI2P10070 1586 aa20.93■□□□□ 0.94
BRD4-211ENST00000602230 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
BRD4-211ENST00000602230 CDK13Q14004 1512 aaKnown RBP20.92■□□□□ 0.94
BRD4-211ENST00000602230 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
BRD4-211ENST00000602230 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
BRD4-211ENST00000602230 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
BRD4-211ENST00000602230 TSPOAP1O95153 1857 aa20.84■□□□□ 0.93
BRD4-211ENST00000602230 MAP3K4Q9Y6R4 1608 aa20.82■□□□□ 0.92
BRD4-211ENST00000602230 CFAP43Q8NDM7 1665 aa20.81■□□□□ 0.92
BRD4-211ENST00000602230 CD109Q6YHK3 1445 aa20.8■□□□□ 0.92
BRD4-211ENST00000602230 TROQ12816 1431 aaPredicted RBP20.78■□□□□ 0.92
BRD4-211ENST00000602230 ABCA9Q8IUA7 1624 aa20.78■□□□□ 0.92
BRD4-211ENST00000602230 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
BRD4-211ENST00000602230 PPRC1Q5VV67 1664 aaKnown RBP20.73■□□□□ 0.91
BRD4-211ENST00000602230 MAGI3Q5TCQ9 1506 aa20.73■□□□□ 0.91
BRD4-211ENST00000602230 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.73■□□□□ 0.91
BRD4-211ENST00000602230 KIF14Q15058 1648 aa20.72■□□□□ 0.91
BRD4-211ENST00000602230 MTUS2Q5JR59 1369 aa20.71■□□□□ 0.91
BRD4-211ENST00000602230 APLP2Q06481 763 aa20.7■□□□□ 0.9
BRD4-211ENST00000602230 TTC37Q6PGP7 1564 aa20.68■□□□□ 0.9
BRD4-211ENST00000602230 TIAM1Q13009 1591 aa20.67■□□□□ 0.9
BRD4-211ENST00000602230 MAP3K1Q13233 1512 aa20.66■□□□□ 0.9
BRD4-211ENST00000602230 PLCH2O75038 1416 aa20.64■□□□□ 0.89
BRD4-211ENST00000602230 PHLDB1Q86UU1 1377 aa20.64■□□□□ 0.89
BRD4-211ENST00000602230 KDM6BO15054 1643 aa20.64■□□□□ 0.89
BRD4-211ENST00000602230 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
BRD4-211ENST00000602230 MYO5CQ9NQX4 1742 aa20.62■□□□□ 0.89
BRD4-211ENST00000602230 NEO1Q92859 1461 aa20.62■□□□□ 0.89
BRD4-211ENST00000602230 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
BRD4-211ENST00000602230 FANCAO15360 1455 aa20.6■□□□□ 0.89
BRD4-211ENST00000602230 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
BRD4-211ENST00000602230 CFAP74Q9C0B2 1584 aa20.59■□□□□ 0.89
BRD4-211ENST00000602230 ARAP3Q8WWN8 1544 aa20.58■□□□□ 0.89
BRD4-211ENST00000602230 KANK4Q5T7N3 995 aaPredicted RBP20.57■□□□□ 0.88
BRD4-211ENST00000602230 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
BRD4-211ENST00000602230 CCNB3Q8WWL7 1395 aa20.56■□□□□ 0.88
BRD4-211ENST00000602230 SUPT6HQ7KZ85 1726 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms