RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 RUSC2Q8N2Y8 1516 aa23.78■■□□□ 1.4
SUPT5H-220ENST00000601978 NPM1P06748 294 aaKnown RBP eCLIP23.73■■□□□ 1.39
SUPT5H-220ENST00000601978 ABCC10Q5T3U5 1492 aa23.73■■□□□ 1.39
SUPT5H-220ENST00000601978 MAPKBP1O60336 1514 aa23.7■■□□□ 1.38
SUPT5H-220ENST00000601978 FAM69CQ0P6D2 419 aa23.7■■□□□ 1.38
SUPT5H-220ENST00000601978 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
SUPT5H-220ENST00000601978 IGF1RP08069 1367 aa23.69■■□□□ 1.38
SUPT5H-220ENST00000601978 ADCY10Q96PN6 1610 aa23.64■■□□□ 1.38
SUPT5H-220ENST00000601978 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
SUPT5H-220ENST00000601978 DIP2BQ9P265 1576 aa23.61■■□□□ 1.37
SUPT5H-220ENST00000601978 CUL7Q14999 1698 aa23.6■■□□□ 1.37
SUPT5H-220ENST00000601978 PTPRGP23470 1445 aa23.52■■□□□ 1.36
SUPT5H-220ENST00000601978 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
SUPT5H-220ENST00000601978 KDM6BO15054 1643 aa23.46■■□□□ 1.35
SUPT5H-220ENST00000601978 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
SUPT5H-220ENST00000601978 CARMIL2Q6F5E8 1435 aa23.45■■□□□ 1.34
SUPT5H-220ENST00000601978 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
SUPT5H-220ENST00000601978 KDM4FA0A1W2PPD8 638 aa23.42■■□□□ 1.34
SUPT5H-220ENST00000601978 TSPOAP1O95153 1857 aa23.41■■□□□ 1.34
SUPT5H-220ENST00000601978 UHRF1BP1LA0JNW5 1464 aa23.38■■□□□ 1.33
SUPT5H-220ENST00000601978 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
SUPT5H-220ENST00000601978 PLB1Q6P1J6 1458 aa23.37■■□□□ 1.33
SUPT5H-220ENST00000601978 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
SUPT5H-220ENST00000601978 TTBK1Q5TCY1 1321 aaPredicted RBP23.35■■□□□ 1.33
SUPT5H-220ENST00000601978 GLI2P10070 1586 aa23.35■■□□□ 1.33
SUPT5H-220ENST00000601978 UACAQ9BZF9 1416 aa23.33■■□□□ 1.32
SUPT5H-220ENST00000601978 DISP1Q96F81 1524 aa23.32■■□□□ 1.32
SUPT5H-220ENST00000601978 PPRC1Q5VV67 1664 aaKnown RBP23.27■■□□□ 1.32
SUPT5H-220ENST00000601978 KDM5BQ9UGL1 1544 aa23.27■■□□□ 1.32
SUPT5H-220ENST00000601978 UGGT2Q9NYU1 1516 aa23.26■■□□□ 1.31
SUPT5H-220ENST00000601978 RAPGEF2Q9Y4G8 1499 aa23.25■■□□□ 1.31
SUPT5H-220ENST00000601978 EPRSP07814 1512 aaKnown RBP23.22■■□□□ 1.31
SUPT5H-220ENST00000601978 COL17A1Q9UMD9 1497 aaPredicted RBP23.18■■□□□ 1.3
SUPT5H-220ENST00000601978 MAP3K4Q9Y6R4 1608 aa23.17■■□□□ 1.3
SUPT5H-220ENST00000601978 TEX14Q8IWB6 1497 aa23.16■■□□□ 1.3
SUPT5H-220ENST00000601978 KIAA0556O60303 1618 aa23.15■■□□□ 1.3
SUPT5H-220ENST00000601978 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.29
SUPT5H-220ENST00000601978 ADGRL1O94910 1474 aa23.11■■□□□ 1.29
SUPT5H-220ENST00000601978 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
SUPT5H-220ENST00000601978 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
SUPT5H-220ENST00000601978 CTTNBP2Q8WZ74 1663 aa23■■□□□ 1.27
SUPT5H-220ENST00000601978 MAGI3Q5TCQ9 1506 aa23■■□□□ 1.27
SUPT5H-220ENST00000601978 ABCA8O94911 1581 aa23■■□□□ 1.27
SUPT5H-220ENST00000601978 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
SUPT5H-220ENST00000601978 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
SUPT5H-220ENST00000601978 ILDR1Q86SU0 546 aaPredicted RBP22.95■■□□□ 1.26
SUPT5H-220ENST00000601978 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.26
SUPT5H-220ENST00000601978 KCNH8Q96L42 1107 aa22.94■■□□□ 1.26
SUPT5H-220ENST00000601978 HECW2Q9P2P5 1572 aa22.87■■□□□ 1.25
SUPT5H-220ENST00000601978 FAM9AQ8IZU1 332 aaPredicted RBP22.86■■□□□ 1.25
SUPT5H-220ENST00000601978 ARAP3Q8WWN8 1544 aa22.83■■□□□ 1.25
SUPT5H-220ENST00000601978 ATP10BO94823 1461 aa22.83■■□□□ 1.25
SUPT5H-220ENST00000601978 PHLDB1Q86UU1 1377 aa22.8■■□□□ 1.24
SUPT5H-220ENST00000601978 P3H3Q8IVL6 736 aa22.76■■□□□ 1.23
SUPT5H-220ENST00000601978 ABCA9Q8IUA7 1624 aa22.73■■□□□ 1.23
SUPT5H-220ENST00000601978 ARID3CA6NKF2 412 aa22.73■■□□□ 1.23
SUPT5H-220ENST00000601978 KIF21BO75037 1637 aa22.72■■□□□ 1.23
SUPT5H-220ENST00000601978 CSRNP3Q8WYN3 585 aa22.72■■□□□ 1.23
SUPT5H-220ENST00000601978 SAMD9Q5K651 1589 aa22.71■■□□□ 1.23
SUPT5H-220ENST00000601978 NEO1Q92859 1461 aa22.68■■□□□ 1.22
SUPT5H-220ENST00000601978 RAPGEF3O95398 923 aa22.66■■□□□ 1.22
SUPT5H-220ENST00000601978 RAPGEF6Q8TEU7 1601 aa22.66■■□□□ 1.22
SUPT5H-220ENST00000601978 ADAMTSL3P82987 1691 aa22.63■■□□□ 1.21
SUPT5H-220ENST00000601978 PTPRMP28827 1452 aa22.61■■□□□ 1.21
SUPT5H-220ENST00000601978 NUP153P49790 1475 aaKnown RBP22.61■■□□□ 1.21
SUPT5H-220ENST00000601978 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
SUPT5H-220ENST00000601978 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
SUPT5H-220ENST00000601978 EEA1Q15075 1411 aa22.58■■□□□ 1.21
SUPT5H-220ENST00000601978 FRMPD1Q5SYB0 1578 aa22.57■■□□□ 1.2
SUPT5H-220ENST00000601978 PLEKHD1A6NEE1 506 aa22.55■■□□□ 1.2
SUPT5H-220ENST00000601978 BCORL1Q5H9F3 1711 aa22.54■■□□□ 1.2
SUPT5H-220ENST00000601978 FHOD3Q2V2M9 1422 aa22.53■■□□□ 1.2
SUPT5H-220ENST00000601978 FBXO41Q8TF61 875 aa22.51■■□□□ 1.19
SUPT5H-220ENST00000601978 ARID4BQ4LE39 1312 aaPredicted RBP22.51■■□□□ 1.19
SUPT5H-220ENST00000601978 DENND4BO75064 1496 aaPredicted RBP22.5■■□□□ 1.19
SUPT5H-220ENST00000601978 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
SUPT5H-220ENST00000601978 ARHGEF40Q8TER5 1519 aa22.47■■□□□ 1.19
SUPT5H-220ENST00000601978 RANGAP1P46060 587 aaPredicted RBP22.47■■□□□ 1.19
SUPT5H-220ENST00000601978 MADDQ8WXG6 1647 aa22.46■■□□□ 1.19
SUPT5H-220ENST00000601978 FANCAO15360 1455 aa22.46■■□□□ 1.19
SUPT5H-220ENST00000601978 RICTORQ6R327 1708 aa22.45■■□□□ 1.19
SUPT5H-220ENST00000601978 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.45■■□□□ 1.185e-6■□□□□ 9.5
SUPT5H-220ENST00000601978 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
SUPT5H-220ENST00000601978 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
SUPT5H-220ENST00000601978 CFAP74Q9C0B2 1584 aa22.44■■□□□ 1.18
SUPT5H-220ENST00000601978 LMTK3Q96Q04 1460 aa22.42■■□□□ 1.18
SUPT5H-220ENST00000601978 ZMYM4Q5VZL5 1548 aa22.41■■□□□ 1.18
SUPT5H-220ENST00000601978 MAGI2Q86UL8 1455 aa22.4■■□□□ 1.18
SUPT5H-220ENST00000601978 POGZQ7Z3K3 1410 aa22.39■■□□□ 1.17
SUPT5H-220ENST00000601978 TTC37Q6PGP7 1564 aa22.38■■□□□ 1.17
SUPT5H-220ENST00000601978 RIMS1Q86UR5 1692 aaKnown RBP22.36■■□□□ 1.17
SUPT5H-220ENST00000601978 YEATS2Q9ULM3 1422 aa22.35■■□□□ 1.17
SUPT5H-220ENST00000601978 ZFYVE16Q7Z3T8 1539 aa22.35■■□□□ 1.17
SUPT5H-220ENST00000601978 PLCH2O75038 1416 aa22.34■■□□□ 1.17
SUPT5H-220ENST00000601978 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
SUPT5H-220ENST00000601978 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
SUPT5H-220ENST00000601978 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
SUPT5H-220ENST00000601978 SIGLEC1Q9BZZ2 1709 aa22.29■■□□□ 1.16
SUPT5H-220ENST00000601978 HSPA2P54652 639 aa22.27■■□□□ 1.16
SUPT5H-220ENST00000601978 FMN1Q68DA7 1419 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms