RNA–Protein interactions for RNA: ENST00000601978.1

SUPT5H-220, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT5H, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-220ENST00000601978 NISCHQ9Y2I1 1504 aa33.93■■■■□ 3.02
SUPT5H-220ENST00000601978 ABCC9O60706 1549 aa30.73■■■□□ 2.51
SUPT5H-220ENST00000601978 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
SUPT5H-220ENST00000601978 RB1CC1Q8TDY2 1594 aa29.18■■■□□ 2.26
SUPT5H-220ENST00000601978 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
SUPT5H-220ENST00000601978 NACADO15069 1562 aa28.96■■■□□ 2.23
SUPT5H-220ENST00000601978 DCAF8L2P0C7V8 631 aa28.68■■■□□ 2.18
SUPT5H-220ENST00000601978 PABPN1Q86U42 306 aaKnown RBP eCLIP28.59■■■□□ 2.17
SUPT5H-220ENST00000601978 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
SUPT5H-220ENST00000601978 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
SUPT5H-220ENST00000601978 BICRAQ9NZM4 1560 aa28.35■■■□□ 2.13
SUPT5H-220ENST00000601978 ZCCHC6Q5VYS8 1495 aaKnown RBP28.06■■■□□ 2.08
SUPT5H-220ENST00000601978 DCAF1Q9Y4B6 1507 aa28.06■■■□□ 2.08
SUPT5H-220ENST00000601978 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
SUPT5H-220ENST00000601978 CC2D2AQ9P2K1 1620 aa27.76■■■□□ 2.03
SUPT5H-220ENST00000601978 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
SUPT5H-220ENST00000601978 SCRIBQ14160 1630 aa27.73■■■□□ 2.03
SUPT5H-220ENST00000601978 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
SUPT5H-220ENST00000601978 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
SUPT5H-220ENST00000601978 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
SUPT5H-220ENST00000601978 CUX2O14529 1486 aa26.66■■□□□ 1.86
SUPT5H-220ENST00000601978 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
SUPT5H-220ENST00000601978 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
SUPT5H-220ENST00000601978 SMARCA2P51531 1590 aa26.52■■□□□ 1.84
SUPT5H-220ENST00000601978 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
SUPT5H-220ENST00000601978 SMARCA4P51532 1647 aa26.48■■□□□ 1.83
SUPT5H-220ENST00000601978 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
SUPT5H-220ENST00000601978 NESP48681 1621 aa26.33■■□□□ 1.81
SUPT5H-220ENST00000601978 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
SUPT5H-220ENST00000601978 PEG3Q9GZU2 1588 aa26.28■■□□□ 1.8
SUPT5H-220ENST00000601978 LAMC3Q9Y6N6 1575 aa26.16■■□□□ 1.78
SUPT5H-220ENST00000601978 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
SUPT5H-220ENST00000601978 THOC2Q8NI27 1593 aaKnown RBP26.12■■□□□ 1.77
SUPT5H-220ENST00000601978 PDS5BQ9NTI5 1447 aa26.04■■□□□ 1.76
SUPT5H-220ENST00000601978 KIF21AQ7Z4S6 1674 aa25.95■■□□□ 1.74
SUPT5H-220ENST00000601978 CADPSQ9ULU8 1353 aa25.93■■□□□ 1.74
SUPT5H-220ENST00000601978 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
SUPT5H-220ENST00000601978 WIZO95785 1651 aa25.75■■□□□ 1.71
SUPT5H-220ENST00000601978 WDR62O43379 1518 aa25.73■■□□□ 1.71
SUPT5H-220ENST00000601978 CEP164Q9UPV0 1460 aa25.64■■□□□ 1.69
SUPT5H-220ENST00000601978 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
SUPT5H-220ENST00000601978 CFTRP13569 1480 aa25.58■■□□□ 1.69
SUPT5H-220ENST00000601978 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
SUPT5H-220ENST00000601978 RSF1Q96T23 1441 aaPredicted RBP25.52■■□□□ 1.68
SUPT5H-220ENST00000601978 TOP2AP11388 1531 aaKnown RBP25.44■■□□□ 1.66
SUPT5H-220ENST00000601978 OSCARQ8IYS5 282 aa25.42■■□□□ 1.66
SUPT5H-220ENST00000601978 URB2Q14146 1524 aaKnown RBP25.39■■□□□ 1.66
SUPT5H-220ENST00000601978 PRDM2Q13029 1718 aa25.21■■□□□ 1.63
SUPT5H-220ENST00000601978 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
SUPT5H-220ENST00000601978 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
SUPT5H-220ENST00000601978 ZNF608Q9ULD9 1512 aaPredicted RBP25.11■■□□□ 1.61
SUPT5H-220ENST00000601978 TOPBP1Q92547 1522 aa25.07■■□□□ 1.6
SUPT5H-220ENST00000601978 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
SUPT5H-220ENST00000601978 RIMBP3CA6NJZ7 1639 aa25.03■■□□□ 1.6
SUPT5H-220ENST00000601978 RIMBP3BA6NNM3 1639 aa25.03■■□□□ 1.6
SUPT5H-220ENST00000601978 RIMBP3Q9UFD9 1639 aa25.03■■□□□ 1.6
SUPT5H-220ENST00000601978 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
SUPT5H-220ENST00000601978 ARHGEF11O15085 1522 aa24.96■■□□□ 1.59
SUPT5H-220ENST00000601978 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
SUPT5H-220ENST00000601978 TARBP1Q13395 1621 aaKnown RBP24.86■■□□□ 1.57
SUPT5H-220ENST00000601978 AQRO60306 1485 aaKnown RBP eCLIP24.86■■□□□ 1.575e-11■□□□□ 10
SUPT5H-220ENST00000601978 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
SUPT5H-220ENST00000601978 CYB5RLQ6IPT4 315 aa24.8■■□□□ 1.56
SUPT5H-220ENST00000601978 CHD1O14646 1710 aa24.77■■□□□ 1.56
SUPT5H-220ENST00000601978 FBLN2P98095 1184 aa24.72■■□□□ 1.55
SUPT5H-220ENST00000601978 SOGA1O94964 1423 aa24.71■■□□□ 1.55
SUPT5H-220ENST00000601978 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
SUPT5H-220ENST00000601978 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
SUPT5H-220ENST00000601978 TDRD9Q8NDG6 1382 aaKnown RBP24.67■■□□□ 1.54
SUPT5H-220ENST00000601978 WDR97A6NE52 1622 aa24.64■■□□□ 1.53
SUPT5H-220ENST00000601978 FGD5Q6ZNL6 1462 aa24.6■■□□□ 1.53
SUPT5H-220ENST00000601978 SNAPC4Q5SXM2 1469 aa24.58■■□□□ 1.53
SUPT5H-220ENST00000601978 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
SUPT5H-220ENST00000601978 CUX1P39880 1505 aa24.56■■□□□ 1.52
SUPT5H-220ENST00000601978 MAGI1Q96QZ7 1491 aaPredicted RBP24.55■■□□□ 1.52
SUPT5H-220ENST00000601978 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
SUPT5H-220ENST00000601978 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
SUPT5H-220ENST00000601978 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
SUPT5H-220ENST00000601978 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
SUPT5H-220ENST00000601978 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
SUPT5H-220ENST00000601978 GAPVD1Q14C86 1478 aa24.39■■□□□ 1.5
SUPT5H-220ENST00000601978 ABCA10Q8WWZ4 1543 aa24.35■■□□□ 1.49
SUPT5H-220ENST00000601978 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
SUPT5H-220ENST00000601978 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
SUPT5H-220ENST00000601978 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
SUPT5H-220ENST00000601978 GRIN2AQ12879 1464 aa24.19■■□□□ 1.46
SUPT5H-220ENST00000601978 NUP160Q12769 1436 aa24.16■■□□□ 1.46
SUPT5H-220ENST00000601978 SUPT5HO00267 1087 aaKnown RBP24.13■■□□□ 1.45
SUPT5H-220ENST00000601978 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
SUPT5H-220ENST00000601978 ERCC6L2Q5T890 1561 aa24.1■■□□□ 1.45
SUPT5H-220ENST00000601978 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
SUPT5H-220ENST00000601978 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
SUPT5H-220ENST00000601978 CEP170Q5SW79 1584 aa24.08■■□□□ 1.45
SUPT5H-220ENST00000601978 BIVM-ERCC5R4GMW8 1640 aa24.08■■□□□ 1.45
SUPT5H-220ENST00000601978 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
SUPT5H-220ENST00000601978 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
SUPT5H-220ENST00000601978 ERICH3Q5RHP9 1530 aa24.04■■□□□ 1.44
SUPT5H-220ENST00000601978 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
SUPT5H-220ENST00000601978 PRG4Q92954 1404 aaPredicted RBP23.91■■□□□ 1.42
SUPT5H-220ENST00000601978 KIF13AQ9H1H9 1805 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms