RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NUP160Q12769 1436 aa29.77■■■□□ 2.36
SSBP4-212ENST00000601919 CEP162Q5TB80 1403 aa29.76■■■□□ 2.35
SSBP4-212ENST00000601919 CEP170Q5SW79 1584 aa29.74■■■□□ 2.35
SSBP4-212ENST00000601919 KIAA0586Q9BVV6 1533 aa29.74■■■□□ 2.35
SSBP4-212ENST00000601919 IQGAP2Q13576 1575 aa29.73■■■□□ 2.35
SSBP4-212ENST00000601919 CLIP1P30622 1438 aa29.69■■■□□ 2.34
SSBP4-212ENST00000601919 RANGAP1P46060 587 aaPredicted RBP29.62■■■□□ 2.33
SSBP4-212ENST00000601919 EFCAB5A4FU69 1503 aa29.6■■■□□ 2.33
SSBP4-212ENST00000601919 UGGT2Q9NYU1 1516 aa29.57■■■□□ 2.32
SSBP4-212ENST00000601919 CLASP1Q7Z460 1538 aa29.52■■■□□ 2.32
SSBP4-212ENST00000601919 OSCARQ8IYS5 282 aa29.52■■■□□ 2.32
SSBP4-212ENST00000601919 ARHGAP35Q9NRY4 1499 aa29.52■■■□□ 2.32
SSBP4-212ENST00000601919 SAMD9Q5K651 1589 aa29.52■■■□□ 2.32
SSBP4-212ENST00000601919 JPH4Q96JJ6 628 aa29.5■■■□□ 2.31
SSBP4-212ENST00000601919 SHROOM2Q13796 1616 aa29.45■■■□□ 2.3
SSBP4-212ENST00000601919 CARMIL2Q6F5E8 1435 aa29.44■■■□□ 2.3
SSBP4-212ENST00000601919 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
SSBP4-212ENST00000601919 KIAA0556O60303 1618 aa29.4■■■□□ 2.3
SSBP4-212ENST00000601919 DISP1Q96F81 1524 aa29.39■■■□□ 2.3
SSBP4-212ENST00000601919 P3H3Q8IVL6 736 aa29.37■■■□□ 2.29
SSBP4-212ENST00000601919 FHOD3Q2V2M9 1422 aa29.36■■■□□ 2.29
SSBP4-212ENST00000601919 VPS8Q8N3P4 1428 aa29.36■■■□□ 2.29
SSBP4-212ENST00000601919 PRG4Q92954 1404 aaPredicted RBP29.36■■■□□ 2.29
SSBP4-212ENST00000601919 FMN1Q68DA7 1419 aa29.32■■■□□ 2.28
SSBP4-212ENST00000601919 ERCC6L2Q5T890 1561 aa29.15■■■□□ 2.26
SSBP4-212ENST00000601919 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
SSBP4-212ENST00000601919 FYCO1Q9BQS8 1478 aa29.15■■■□□ 2.26
SSBP4-212ENST00000601919 PTPRGP23470 1445 aa29.14■■■□□ 2.26
SSBP4-212ENST00000601919 PCF11O94913 1555 aaKnown RBP29.13■■■□□ 2.25
SSBP4-212ENST00000601919 APLP2Q06481 763 aa29.12■■■□□ 2.25
SSBP4-212ENST00000601919 TTBK1Q5TCY1 1321 aaPredicted RBP29.1■■■□□ 2.25
SSBP4-212ENST00000601919 HECW1Q76N89 1606 aa29.07■■■□□ 2.24
SSBP4-212ENST00000601919 RAPGEF6Q8TEU7 1601 aa29.07■■■□□ 2.24
SSBP4-212ENST00000601919 ATP1B4Q9UN42 357 aaPredicted RBP29.05■■■□□ 2.24
SSBP4-212ENST00000601919 ABCA8O94911 1581 aa29.01■■■□□ 2.24
SSBP4-212ENST00000601919 MAP3K1Q13233 1512 aa29■■■□□ 2.23
SSBP4-212ENST00000601919 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
SSBP4-212ENST00000601919 PLB1Q6P1J6 1458 aa28.99■■■□□ 2.23
SSBP4-212ENST00000601919 CCDC18Q5T9S5 1454 aa28.97■■■□□ 2.23
SSBP4-212ENST00000601919 UACAQ9BZF9 1416 aa28.97■■■□□ 2.23
SSBP4-212ENST00000601919 CFAP43Q8NDM7 1665 aa28.94■■■□□ 2.22
SSBP4-212ENST00000601919 TIAM1Q13009 1591 aa28.94■■■□□ 2.22
SSBP4-212ENST00000601919 NUP153P49790 1475 aaKnown RBP28.92■■■□□ 2.22
SSBP4-212ENST00000601919 LRRIQ1Q96JM4 1722 aa28.91■■■□□ 2.22
SSBP4-212ENST00000601919 EPRSP07814 1512 aaKnown RBP28.91■■■□□ 2.22
SSBP4-212ENST00000601919 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
SSBP4-212ENST00000601919 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
SSBP4-212ENST00000601919 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
SSBP4-212ENST00000601919 ABCC2Q92887 1545 aa28.9■■■□□ 2.22
SSBP4-212ENST00000601919 UHRF1BP1LA0JNW5 1464 aa28.9■■■□□ 2.22
SSBP4-212ENST00000601919 CDK13Q14004 1512 aaKnown RBP28.81■■■□□ 2.2
SSBP4-212ENST00000601919 CDK11AQ9UQ88 783 aaPredicted RBP28.81■■■□□ 2.2
SSBP4-212ENST00000601919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.8■■■□□ 2.2
SSBP4-212ENST00000601919 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
SSBP4-212ENST00000601919 LRRC9Q6ZRR7 1453 aa28.79■■■□□ 2.2
SSBP4-212ENST00000601919 ATP10BO94823 1461 aa28.78■■■□□ 2.2
SSBP4-212ENST00000601919 ADCY10Q96PN6 1610 aa28.77■■■□□ 2.2
SSBP4-212ENST00000601919 ARID3CA6NKF2 412 aa28.77■■■□□ 2.2
SSBP4-212ENST00000601919 MTUS2Q5JR59 1369 aa28.75■■■□□ 2.19
SSBP4-212ENST00000601919 KANK4Q5T7N3 995 aaPredicted RBP28.75■■■□□ 2.19
SSBP4-212ENST00000601919 PPARGC1BQ86YN6 1023 aaKnown RBP28.75■■■□□ 2.19
SSBP4-212ENST00000601919 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
SSBP4-212ENST00000601919 KDM5BQ9UGL1 1544 aa28.74■■■□□ 2.19
SSBP4-212ENST00000601919 ZCCHC11Q5TAX3 1644 aaKnown RBP28.7■■■□□ 2.19
SSBP4-212ENST00000601919 CYB5RLQ6IPT4 315 aa28.69■■■□□ 2.18
SSBP4-212ENST00000601919 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
SSBP4-212ENST00000601919 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
SSBP4-212ENST00000601919 SUPT6HQ7KZ85 1726 aaKnown RBP28.65■■■□□ 2.18
SSBP4-212ENST00000601919 MAGI3Q5TCQ9 1506 aa28.64■■■□□ 2.18
SSBP4-212ENST00000601919 TROQ12816 1431 aaPredicted RBP28.64■■■□□ 2.18
SSBP4-212ENST00000601919 DNAJC5Q9H3Z4 198 aa28.54■■■□□ 2.16
SSBP4-212ENST00000601919 KIF14Q15058 1648 aa28.54■■■□□ 2.16
SSBP4-212ENST00000601919 NCOA2Q15596 1464 aa28.53■■■□□ 2.16
SSBP4-212ENST00000601919 WDR7Q9Y4E6 1490 aa28.49■■■□□ 2.15
SSBP4-212ENST00000601919 TRIM26Q12899 539 aaPredicted RBP28.49■■■□□ 2.15
SSBP4-212ENST00000601919 ASXL2Q76L83 1435 aa28.47■■■□□ 2.15
SSBP4-212ENST00000601919 PHLDB1Q86UU1 1377 aa28.44■■■□□ 2.14
SSBP4-212ENST00000601919 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
SSBP4-212ENST00000601919 CCNB3Q8WWL7 1395 aa28.42■■■□□ 2.14
SSBP4-212ENST00000601919 MYOM3Q5VTT5 1437 aa28.42■■■□□ 2.14
SSBP4-212ENST00000601919 ITSN2Q9NZM3 1697 aa28.4■■■□□ 2.14
SSBP4-212ENST00000601919 KCNH8Q96L42 1107 aa28.39■■■□□ 2.14
SSBP4-212ENST00000601919 ABCC10Q5T3U5 1492 aa28.38■■■□□ 2.13
SSBP4-212ENST00000601919 RRBP1Q9P2E9 1410 aaKnown RBP28.37■■■□□ 2.13
SSBP4-212ENST00000601919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.35■■■□□ 2.13
SSBP4-212ENST00000601919 FGD6Q6ZV73 1430 aa28.34■■■□□ 2.13
SSBP4-212ENST00000601919 MIA2Q96PC5 1412 aa28.34■■■□□ 2.13
SSBP4-212ENST00000601919 CDC42BPAQ5VT25 1732 aa28.32■■■□□ 2.12
SSBP4-212ENST00000601919 GPATCH8Q9UKJ3 1502 aaKnown RBP28.32■■■□□ 2.12
SSBP4-212ENST00000601919 TTC37Q6PGP7 1564 aa28.31■■■□□ 2.12
SSBP4-212ENST00000601919 MYO5CQ9NQX4 1742 aa28.31■■■□□ 2.12
SSBP4-212ENST00000601919 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
SSBP4-212ENST00000601919 PREX2Q70Z35 1606 aa28.27■■■□□ 2.12
SSBP4-212ENST00000601919 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.26■■■□□ 2.12
SSBP4-212ENST00000601919 PTPN23Q9H3S7 1636 aa28.26■■■□□ 2.11
SSBP4-212ENST00000601919 CFDP1Q9UEE9 299 aaPredicted RBP28.26■■■□□ 2.11
SSBP4-212ENST00000601919 FAM50AQ14320 339 aaKnown RBP28.22■■■□□ 2.11
SSBP4-212ENST00000601919 PCGF6Q9BYE7 350 aa28.22■■■□□ 2.11
SSBP4-212ENST00000601919 CDC42BPBQ9Y5S2 1711 aa28.22■■■□□ 2.11
SSBP4-212ENST00000601919 ARAP3Q8WWN8 1544 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms