RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 WDR97A6NE52 1622 aa23.63■■□□□ 1.37
CAPN12-211ENST00000601685 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
CAPN12-211ENST00000601685 FKBP8Q14318 412 aa23.62■■□□□ 1.37
CAPN12-211ENST00000601685 DDX10Q13206 875 aaKnown RBP23.61■■□□□ 1.37
CAPN12-211ENST00000601685 BCANQ96GW7 911 aa23.61■■□□□ 1.37
CAPN12-211ENST00000601685 CARMIL1Q5VZK9 1371 aa23.6■■□□□ 1.37
CAPN12-211ENST00000601685 FGD5Q6ZNL6 1462 aa23.59■■□□□ 1.37
CAPN12-211ENST00000601685 PPP1R15AO75807 674 aaPredicted RBP23.58■■□□□ 1.37
CAPN12-211ENST00000601685 LRRC9Q6ZRR7 1453 aa23.57■■□□□ 1.36
CAPN12-211ENST00000601685 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
CAPN12-211ENST00000601685 SIN3AQ96ST3 1273 aa23.55■■□□□ 1.36
CAPN12-211ENST00000601685 PHLDB1Q86UU1 1377 aa23.53■■□□□ 1.36
CAPN12-211ENST00000601685 CCER2I3L3R5 266 aa23.51■■□□□ 1.35
CAPN12-211ENST00000601685 NEFLP07196 543 aa23.48■■□□□ 1.35
CAPN12-211ENST00000601685 CFAP43Q8NDM7 1665 aa23.45■■□□□ 1.34
CAPN12-211ENST00000601685 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
CAPN12-211ENST00000601685 P3H3Q8IVL6 736 aa23.44■■□□□ 1.34
CAPN12-211ENST00000601685 RBM19Q9Y4C8 960 aaKnown RBP23.43■■□□□ 1.34
CAPN12-211ENST00000601685 FHAD1B1AJZ9 1412 aa23.43■■□□□ 1.34
CAPN12-211ENST00000601685 ANP32CO43423 234 aa23.42■■□□□ 1.34
CAPN12-211ENST00000601685 FANCD2Q9BXW9 1451 aa23.41■■□□□ 1.34
CAPN12-211ENST00000601685 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.34
CAPN12-211ENST00000601685 PCF11O94913 1555 aaKnown RBP23.38■■□□□ 1.33
CAPN12-211ENST00000601685 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
CAPN12-211ENST00000601685 TRIM52Q96A61 297 aa23.38■■□□□ 1.33
CAPN12-211ENST00000601685 HIRIP3Q9BW71 556 aaPredicted RBP23.36■■□□□ 1.33
CAPN12-211ENST00000601685 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
CAPN12-211ENST00000601685 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.35■■□□□ 1.333e-6■■□□□ 12.8
CAPN12-211ENST00000601685 FHOD3Q2V2M9 1422 aa23.33■■□□□ 1.33
CAPN12-211ENST00000601685 BCL11AQ9H165 835 aa23.33■■□□□ 1.32
CAPN12-211ENST00000601685 DNMBPQ6XZF7 1577 aa23.3■■□□□ 1.32
CAPN12-211ENST00000601685 ABCA10Q8WWZ4 1543 aa23.29■■□□□ 1.32
CAPN12-211ENST00000601685 POLA1P09884 1462 aaPredicted RBP23.29■■□□□ 1.32
CAPN12-211ENST00000601685 TOPBP1Q92547 1522 aa23.27■■□□□ 1.31
CAPN12-211ENST00000601685 FYCO1Q9BQS8 1478 aa23.25■■□□□ 1.31
CAPN12-211ENST00000601685 TONSLQ96HA7 1378 aa23.25■■□□□ 1.31
CAPN12-211ENST00000601685 EFCAB5A4FU69 1503 aa23.23■■□□□ 1.31
CAPN12-211ENST00000601685 NESP48681 1621 aa23.22■■□□□ 1.31
CAPN12-211ENST00000601685 CASKIN1Q8WXD9 1431 aa23.22■■□□□ 1.31
CAPN12-211ENST00000601685 AQRO60306 1485 aaKnown RBP eCLIP23.21■■□□□ 1.312e-12■■■■□ 26.1
CAPN12-211ENST00000601685 CUL7Q14999 1698 aa23.19■■□□□ 1.3
CAPN12-211ENST00000601685 CCDC18Q5T9S5 1454 aa23.19■■□□□ 1.3
CAPN12-211ENST00000601685 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
CAPN12-211ENST00000601685 FGD6Q6ZV73 1430 aa23.17■■□□□ 1.3
CAPN12-211ENST00000601685 UACAQ9BZF9 1416 aa23.17■■□□□ 1.3
CAPN12-211ENST00000601685 MSH5O43196 834 aa23.16■■□□□ 1.3
CAPN12-211ENST00000601685 DNAJC5BQ9UF47 199 aa23.16■■□□□ 1.3
CAPN12-211ENST00000601685 HFM1A2PYH4 1435 aa23.14■■□□□ 1.3
CAPN12-211ENST00000601685 FMN1Q68DA7 1419 aa23.13■■□□□ 1.29
CAPN12-211ENST00000601685 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
CAPN12-211ENST00000601685 PTPN23Q9H3S7 1636 aa23.12■■□□□ 1.29
CAPN12-211ENST00000601685 HNRNPUQ00839 825 aaKnown RBP eCLIP23.1■■□□□ 1.29
CAPN12-211ENST00000601685 PTPRKQ15262 1439 aa23.09■■□□□ 1.29
CAPN12-211ENST00000601685 SNAPC4Q5SXM2 1469 aa23.09■■□□□ 1.29
CAPN12-211ENST00000601685 KDM5BQ9UGL1 1544 aa23.09■■□□□ 1.29
CAPN12-211ENST00000601685 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.28
CAPN12-211ENST00000601685 CDK11AQ9UQ88 783 aaPredicted RBP23.07■■□□□ 1.28
CAPN12-211ENST00000601685 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
CAPN12-211ENST00000601685 TDRD9Q8NDG6 1382 aaKnown RBP23.05■■□□□ 1.28
CAPN12-211ENST00000601685 NAIPQ13075 1403 aa23.05■■□□□ 1.28
CAPN12-211ENST00000601685 ERICH6BQ5W0A0 696 aa23.02■■□□□ 1.28
CAPN12-211ENST00000601685 IRX6P78412 446 aaPredicted RBP23■■□□□ 1.27
CAPN12-211ENST00000601685 SAMD9Q5K651 1589 aa22.99■■□□□ 1.27
CAPN12-211ENST00000601685 LAMC3Q9Y6N6 1575 aa22.99■■□□□ 1.27
CAPN12-211ENST00000601685 LRRIQ1Q96JM4 1722 aa22.99■■□□□ 1.27
CAPN12-211ENST00000601685 ABCA5Q8WWZ7 1642 aa22.98■■□□□ 1.27
CAPN12-211ENST00000601685 WASHC2AQ641Q2 1341 aa22.98■■□□□ 1.27
CAPN12-211ENST00000601685 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
CAPN12-211ENST00000601685 MYOM3Q5VTT5 1437 aa22.97■■□□□ 1.27
CAPN12-211ENST00000601685 NCOA2Q15596 1464 aa22.96■■□□□ 1.27
CAPN12-211ENST00000601685 HSPA5P11021 654 aaKnown RBP22.95■■□□□ 1.26
CAPN12-211ENST00000601685 GRIN2BQ13224 1484 aa22.94■■□□□ 1.26
CAPN12-211ENST00000601685 PPP4R2Q9NY27 417 aa22.93■■□□□ 1.26
CAPN12-211ENST00000601685 ERICH6Q7L0X2 663 aa22.92■■□□□ 1.26
CAPN12-211ENST00000601685 CNTLNQ9NXG0 1405 aa22.9■■□□□ 1.26
CAPN12-211ENST00000601685 SUPT6HQ7KZ85 1726 aaKnown RBP22.89■■□□□ 1.26
CAPN12-211ENST00000601685 THOC2Q8NI27 1593 aaKnown RBP22.88■■□□□ 1.25
CAPN12-211ENST00000601685 EIF4G2P78344 907 aaKnown RBP eCLIP22.87■■□□□ 1.25
CAPN12-211ENST00000601685 EHBP1L1Q8N3D4 1523 aa22.87■■□□□ 1.25
CAPN12-211ENST00000601685 PDS5BQ9NTI5 1447 aa22.86■■□□□ 1.25
CAPN12-211ENST00000601685 DENND4BO75064 1496 aaPredicted RBP22.86■■□□□ 1.25
CAPN12-211ENST00000601685 HECW1Q76N89 1606 aa22.86■■□□□ 1.25
CAPN12-211ENST00000601685 CCDC184Q52MB2 194 aa22.85■■□□□ 1.25
CAPN12-211ENST00000601685 UGGT2Q9NYU1 1516 aa22.83■■□□□ 1.25
CAPN12-211ENST00000601685 GCC2Q8IWJ2 1684 aa22.83■■□□□ 1.25
CAPN12-211ENST00000601685 ARHGEF11O15085 1522 aa22.83■■□□□ 1.24
CAPN12-211ENST00000601685 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
CAPN12-211ENST00000601685 PRKRIP1Q9H875 184 aaPredicted RBP22.81■■□□□ 1.24
CAPN12-211ENST00000601685 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
CAPN12-211ENST00000601685 NCOA1Q15788 1441 aa22.8■■□□□ 1.24
CAPN12-211ENST00000601685 RRP7BPQ9NSQ0 103 aa22.8■■□□□ 1.24
CAPN12-211ENST00000601685 AKNAQ7Z591 1439 aa22.79■■□□□ 1.24
CAPN12-211ENST00000601685 ZBED9Q6R2W3 1325 aa22.79■■□□□ 1.24
CAPN12-211ENST00000601685 KIF21AQ7Z4S6 1674 aa22.79■■□□□ 1.24
CAPN12-211ENST00000601685 CHIC2Q9UKJ5 165 aa22.79■■□□□ 1.24
CAPN12-211ENST00000601685 MYT1LQ9UL68 1186 aa22.79■■□□□ 1.24
CAPN12-211ENST00000601685 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
CAPN12-211ENST00000601685 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
CAPN12-211ENST00000601685 C11orf95C9JLR9 678 aaPredicted RBP22.76■■□□□ 1.23
CAPN12-211ENST00000601685 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms