RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, humanhuman

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-211ENST00000601685 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
CAPN12-211ENST00000601685 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
CAPN12-211ENST00000601685 SUPT5HO00267 1087 aaKnown RBP28.13■■■□□ 2.09
CAPN12-211ENST00000601685 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
CAPN12-211ENST00000601685 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
CAPN12-211ENST00000601685 HRCP23327 699 aa27.81■■■□□ 2.04
CAPN12-211ENST00000601685 MYO15BQ96JP2 1530 aa27.72■■■□□ 2.03
CAPN12-211ENST00000601685 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
CAPN12-211ENST00000601685 DCAF8L2P0C7V8 631 aa27.57■■■□□ 2
CAPN12-211ENST00000601685 PCGF6Q9BYE7 350 aa27.36■■□□□ 1.97
CAPN12-211ENST00000601685 DCAF1Q9Y4B6 1507 aa27.19■■□□□ 1.94
CAPN12-211ENST00000601685 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
CAPN12-211ENST00000601685 LOC105371045A0A1W2PR82 267 aa26.85■■□□□ 1.89
CAPN12-211ENST00000601685 TRIM26Q12899 539 aaPredicted RBP26.74■■□□□ 1.87
CAPN12-211ENST00000601685 ABCC9O60706 1549 aa26.55■■□□□ 1.84
CAPN12-211ENST00000601685 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
CAPN12-211ENST00000601685 ZEB1P37275 1124 aaPredicted RBP26.43■■□□□ 1.82
CAPN12-211ENST00000601685 RSF1Q96T23 1441 aaPredicted RBP26.34■■□□□ 1.81
CAPN12-211ENST00000601685 TRIM41Q8WV44 630 aa26.17■■□□□ 1.78
CAPN12-211ENST00000601685 PELP1Q8IZL8 1130 aaKnown RBP26.16■■□□□ 1.78
CAPN12-211ENST00000601685 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
CAPN12-211ENST00000601685 NACADO15069 1562 aa25.97■■□□□ 1.75
CAPN12-211ENST00000601685 FAM9AQ8IZU1 332 aaPredicted RBP25.97■■□□□ 1.75
CAPN12-211ENST00000601685 SCAF1Q9H7N4 1312 aaKnown RBP25.96■■□□□ 1.75
CAPN12-211ENST00000601685 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
CAPN12-211ENST00000601685 MROH2BQ7Z745 1585 aa25.83■■□□□ 1.73
CAPN12-211ENST00000601685 WIZO95785 1651 aa25.71■■□□□ 1.71
CAPN12-211ENST00000601685 EHMT2Q96KQ7 1210 aa25.7■■□□□ 1.71
CAPN12-211ENST00000601685 ACIN1Q9UKV3 1341 aaKnown RBP25.54■■□□□ 1.68
CAPN12-211ENST00000601685 BAZ1AQ9NRL2 1556 aaPredicted RBP25.53■■□□□ 1.68
CAPN12-211ENST00000601685 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
CAPN12-211ENST00000601685 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
CAPN12-211ENST00000601685 NEUROD1Q13562 356 aa25.43■■□□□ 1.66
CAPN12-211ENST00000601685 EIF4G1Q04637 1599 aaKnown RBP25.42■■□□□ 1.66
CAPN12-211ENST00000601685 DIEXFQ68CQ4 756 aaKnown RBP25.34■■□□□ 1.65
CAPN12-211ENST00000601685 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
CAPN12-211ENST00000601685 CENPBP07199 599 aaPredicted RBP25.29■■□□□ 1.64
CAPN12-211ENST00000601685 TOP2AP11388 1531 aaKnown RBP25.27■■□□□ 1.64
CAPN12-211ENST00000601685 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
CAPN12-211ENST00000601685 GTF3C3Q9Y5Q9 886 aa25.23■■□□□ 1.63
CAPN12-211ENST00000601685 ABCC8Q09428 1581 aa25.21■■□□□ 1.63
CAPN12-211ENST00000601685 CCDC88BA6NC98 1476 aa25.2■■□□□ 1.62
CAPN12-211ENST00000601685 UNC13AQ9UPW8 1703 aa25.18■■□□□ 1.62
CAPN12-211ENST00000601685 SMARCA2P51531 1590 aa25.16■■□□□ 1.62
CAPN12-211ENST00000601685 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
CAPN12-211ENST00000601685 TNIKQ9UKE5 1360 aa25.09■■□□□ 1.61
CAPN12-211ENST00000601685 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
CAPN12-211ENST00000601685 MYT1Q01538 1121 aa25.02■■□□□ 1.6
CAPN12-211ENST00000601685 ZNF316A6NFI3 1004 aaPredicted RBP25.01■■□□□ 1.6
CAPN12-211ENST00000601685 SOGA1O94964 1423 aa25■■□□□ 1.59
CAPN12-211ENST00000601685 EEA1Q15075 1411 aa24.98■■□□□ 1.59
CAPN12-211ENST00000601685 PABPN1Q86U42 306 aaKnown RBP eCLIP24.92■■□□□ 1.583e-9■□□□□ 11.2
CAPN12-211ENST00000601685 CSRNP3Q8WYN3 585 aa24.91■■□□□ 1.58
CAPN12-211ENST00000601685 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
CAPN12-211ENST00000601685 BICRAQ9NZM4 1560 aa24.85■■□□□ 1.57
CAPN12-211ENST00000601685 UBTFP17480 764 aaKnown RBP24.84■■□□□ 1.57
CAPN12-211ENST00000601685 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
CAPN12-211ENST00000601685 PEG3Q9GZU2 1588 aa24.74■■□□□ 1.55
CAPN12-211ENST00000601685 YTHDC1Q96MU7 727 aaKnown RBP24.73■■□□□ 1.55
CAPN12-211ENST00000601685 MIER1Q8N108 512 aa24.72■■□□□ 1.55
CAPN12-211ENST00000601685 CEP164Q9UPV0 1460 aa24.63■■□□□ 1.53
CAPN12-211ENST00000601685 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
CAPN12-211ENST00000601685 KIF21BO75037 1637 aa24.62■■□□□ 1.53
CAPN12-211ENST00000601685 SYNJ1O43426 1573 aa24.62■■□□□ 1.53
CAPN12-211ENST00000601685 ATAD2BQ9ULI0 1458 aa24.57■■□□□ 1.52
CAPN12-211ENST00000601685 CLIP1P30622 1438 aa24.57■■□□□ 1.52
CAPN12-211ENST00000601685 VPS8Q8N3P4 1428 aa24.54■■□□□ 1.52
CAPN12-211ENST00000601685 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
CAPN12-211ENST00000601685 APLP2Q06481 763 aa24.42■■□□□ 1.5
CAPN12-211ENST00000601685 RAPGEF2Q9Y4G8 1499 aa24.38■■□□□ 1.49
CAPN12-211ENST00000601685 CLSPNQ9HAW4 1339 aa24.37■■□□□ 1.49
CAPN12-211ENST00000601685 RANGAP1P46060 587 aaPredicted RBP24.31■■□□□ 1.48
CAPN12-211ENST00000601685 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
CAPN12-211ENST00000601685 DHX57Q6P158 1386 aaKnown RBP24.28■■□□□ 1.48
CAPN12-211ENST00000601685 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
CAPN12-211ENST00000601685 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
CAPN12-211ENST00000601685 ERICH3Q5RHP9 1530 aa24.12■■□□□ 1.45
CAPN12-211ENST00000601685 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
CAPN12-211ENST00000601685 PRXQ9BXM0 1461 aa24.1■■□□□ 1.45
CAPN12-211ENST00000601685 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
CAPN12-211ENST00000601685 KANK4Q5T7N3 995 aaPredicted RBP24.05■■□□□ 1.44
CAPN12-211ENST00000601685 CUX2O14529 1486 aa24.05■■□□□ 1.44
CAPN12-211ENST00000601685 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
CAPN12-211ENST00000601685 HMGXB3Q12766 1538 aa24.05■■□□□ 1.44
CAPN12-211ENST00000601685 CUX1P39880 1505 aa24.03■■□□□ 1.44
CAPN12-211ENST00000601685 KIF27Q86VH2 1401 aa23.96■■□□□ 1.43
CAPN12-211ENST00000601685 TSHZ2Q9NRE2 1034 aa23.95■■□□□ 1.42
CAPN12-211ENST00000601685 CFTRP13569 1480 aa23.92■■□□□ 1.42
CAPN12-211ENST00000601685 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
CAPN12-211ENST00000601685 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
CAPN12-211ENST00000601685 MAPKBP1O60336 1514 aa23.8■■□□□ 1.4
CAPN12-211ENST00000601685 KCNH8Q96L42 1107 aa23.79■■□□□ 1.4
CAPN12-211ENST00000601685 ANP32EQ9BTT0 268 aa23.79■■□□□ 1.4
CAPN12-211ENST00000601685 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CAPN12-211ENST00000601685 ITGAEP38570 1179 aa23.74■■□□□ 1.39
CAPN12-211ENST00000601685 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
CAPN12-211ENST00000601685 IGF1RP08069 1367 aa23.69■■□□□ 1.38
CAPN12-211ENST00000601685 MAP3K1Q13233 1512 aa23.69■■□□□ 1.38
CAPN12-211ENST00000601685 SETD5Q9C0A6 1442 aa23.67■■□□□ 1.38
CAPN12-211ENST00000601685 TIAM1Q13009 1591 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms