RNA–Protein interactions for RNA: ENST00000601004.1

CDC42EP3P1-201, Transcript of CDC42 effector protein 3 pseudogene 1, humanhuman

BASIC

Gene CDC42EP3P1, Length 764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3P1-201ENST00000601004 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 OSCARQ8IYS5 282 aa9.14□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 FAM9AQ8IZU1 332 aaPredicted RBP9.14□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 GRIN2AQ12879 1464 aa9.12□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 RAPGEF2Q9Y4G8 1499 aa9.12□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 CARMIL1Q5VZK9 1371 aa9.12□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 KIF21BO75037 1637 aa9.11□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 IGF1RP08069 1367 aa9.11□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 CSRNP3Q8WYN3 585 aa9.1□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 RNF216Q9NWF9 866 aaPredicted RBP9.09□□□□□ -0.95
CDC42EP3P1-201ENST00000601004 FBLN2P98095 1184 aa9.07□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 PRXQ9BXM0 1461 aa9.07□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 NUP160Q12769 1436 aa9.06□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 IQGAP2Q13576 1575 aa9.04□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 GOLGA3Q08378 1498 aa9.04□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 CARMIL2Q6F5E8 1435 aa9.04□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 HOXD11P31277 338 aaPredicted RBP9.03□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 CLASP1Q7Z460 1538 aa9.03□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 RUSC2Q8N2Y8 1516 aa9.03□□□□□ -0.96
CDC42EP3P1-201ENST00000601004 SHROOM2Q13796 1616 aa9.02□□□□□ -0.97
CDC42EP3P1-201ENST00000601004 CEP170Q5SW79 1584 aa9.01□□□□□ -0.97
CDC42EP3P1-201ENST00000601004 EFCAB5A4FU69 1503 aa9□□□□□ -0.97
CDC42EP3P1-201ENST00000601004 UGGT2Q9NYU1 1516 aa8.98□□□□□ -0.97
CDC42EP3P1-201ENST00000601004 UBTFP17480 764 aaKnown RBP8.96□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 JPH4Q96JJ6 628 aa8.96□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 DNAJC5Q9H3Z4 198 aa8.96□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 TNIKQ9UKE5 1360 aa8.93□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 ARHGEF11O15085 1522 aa8.93□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 PRG4Q92954 1404 aaPredicted RBP8.92□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 RIMBP3CA6NJZ7 1639 aa8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 RIMBP3BA6NNM3 1639 aa8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 KIAA0556O60303 1618 aa8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 RIMBP3Q9UFD9 1639 aa8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 SAMD9Q5K651 1589 aa8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 SLC4A1APQ9BWU0 796 aaKnown RBP8.91□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 FMN1Q68DA7 1419 aa8.9□□□□□ -0.98
CDC42EP3P1-201ENST00000601004 NPM1P06748 294 aaKnown RBP eCLIP8.87□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 PTPRGP23470 1445 aa8.87□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 DISP1Q96F81 1524 aa8.85□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 UHRF1BP1LA0JNW5 1464 aa8.85□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 POTEDQ86YR6 584 aa8.85□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 CLIP1P30622 1438 aa8.84□□□□□ -0.99
CDC42EP3P1-201ENST00000601004 HECW1Q76N89 1606 aa8.83□□□□□ -1
CDC42EP3P1-201ENST00000601004 UACAQ9BZF9 1416 aa8.82□□□□□ -1
CDC42EP3P1-201ENST00000601004 ABCC2Q92887 1545 aa8.82□□□□□ -1
CDC42EP3P1-201ENST00000601004 CDK11AQ9UQ88 783 aaPredicted RBP8.82□□□□□ -1
CDC42EP3P1-201ENST00000601004 RAPGEF6Q8TEU7 1601 aa8.82□□□□□ -1
CDC42EP3P1-201ENST00000601004 CCDC18Q5T9S5 1454 aa8.82□□□□□ -1
CDC42EP3P1-201ENST00000601004 ARAP1Q96P48 1450 aa8.81□□□□□ -1
CDC42EP3P1-201ENST00000601004 CEP162Q5TB80 1403 aa8.8□□□□□ -1
CDC42EP3P1-201ENST00000601004 FYCO1Q9BQS8 1478 aa8.8□□□□□ -1
CDC42EP3P1-201ENST00000601004 ABCA8O94911 1581 aa8.79□□□□□ -1
CDC42EP3P1-201ENST00000601004 ARHGAP35Q9NRY4 1499 aa8.79□□□□□ -1
CDC42EP3P1-201ENST00000601004 MAPKBP1O60336 1514 aa8.79□□□□□ -1
CDC42EP3P1-201ENST00000601004 CYB5RLQ6IPT4 315 aa8.78□□□□□ -1
CDC42EP3P1-201ENST00000601004 PLB1Q6P1J6 1458 aa8.77□□□□□ -1
CDC42EP3P1-201ENST00000601004 KDM5BQ9UGL1 1544 aa8.77□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 APLP2Q06481 763 aa8.77□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 CASKIN1Q8WXD9 1431 aa8.77□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 ERCC6L2Q5T890 1561 aa8.76□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 ADCY10Q96PN6 1610 aa8.76□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 MAP3K1Q13233 1512 aa8.75□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 FHOD3Q2V2M9 1422 aa8.75□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 VPS8Q8N3P4 1428 aa8.74□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 ZCCHC11Q5TAX3 1644 aaKnown RBP8.74□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 PLEKHD1A6NEE1 506 aa8.72□□□□□ -1.01
CDC42EP3P1-201ENST00000601004 CFAP43Q8NDM7 1665 aa8.71□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 WDR7Q9Y4E6 1490 aa8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 EPRSP07814 1512 aaKnown RBP8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 GLI2P10070 1586 aa8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 CFAP74Q9C0B2 1584 aa8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 RANGAP1P46060 587 aaPredicted RBP8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 HNRNPUL2Q1KMD3 747 aaKnown RBP8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 P3H3Q8IVL6 736 aa8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 NUP153P49790 1475 aaKnown RBP8.7□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 PCF11O94913 1555 aaKnown RBP8.69□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 KIF14Q15058 1648 aa8.69□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 EHMT2Q96KQ7 1210 aa8.69□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 PHLDB1Q86UU1 1377 aa8.69□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 TEX14Q8IWB6 1497 aa8.69□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 LOC105371045A0A1W2PR82 267 aa8.68□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ATP10BO94823 1461 aa8.67□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ABCC10Q5T3U5 1492 aa8.67□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 TTBK1Q5TCY1 1321 aaPredicted RBP8.67□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ITSN2Q9NZM3 1697 aa8.67□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 SUPT6HQ7KZ85 1726 aaKnown RBP8.66□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ARAP3Q8WWN8 1544 aa8.66□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 MTUS2Q5JR59 1369 aa8.66□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 TIAM1Q13009 1591 aa8.65□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 DIP2BQ9P265 1576 aa8.65□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 TROQ12816 1431 aaPredicted RBP8.65□□□□□ -1.02
CDC42EP3P1-201ENST00000601004 MYO5CQ9NQX4 1742 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms