RNA–Protein interactions for RNA: ENST00000601004.1

CDC42EP3P1-201, Transcript of CDC42 effector protein 3 pseudogene 1, humanhuman

BASIC

Gene CDC42EP3P1, Length 764 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3P1-201ENST00000601004 AEBP2Q6ZN18 517 aaPredicted RBP13.49□□□□□ -0.25
CDC42EP3P1-201ENST00000601004 CHIC1Q5VXU3 224 aa13.28□□□□□ -0.28
CDC42EP3P1-201ENST00000601004 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
CDC42EP3P1-201ENST00000601004 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
CDC42EP3P1-201ENST00000601004 PHF23Q9BUL5 403 aaPredicted RBP11.65□□□□□ -0.54
CDC42EP3P1-201ENST00000601004 SENP3Q9H4L4 574 aaPredicted RBP11.53□□□□□ -0.56
CDC42EP3P1-201ENST00000601004 ABCC9O60706 1549 aa11.05□□□□□ -0.64
CDC42EP3P1-201ENST00000601004 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
CDC42EP3P1-201ENST00000601004 NACADO15069 1562 aa10.96□□□□□ -0.65
CDC42EP3P1-201ENST00000601004 DCAF1Q9Y4B6 1507 aa10.96□□□□□ -0.65
CDC42EP3P1-201ENST00000601004 RB1CC1Q8TDY2 1594 aa10.93□□□□□ -0.66
CDC42EP3P1-201ENST00000601004 ZCCHC6Q5VYS8 1495 aaKnown RBP10.92□□□□□ -0.66
CDC42EP3P1-201ENST00000601004 PLPPR3Q6T4P5 718 aa10.84□□□□□ -0.67
CDC42EP3P1-201ENST00000601004 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
CDC42EP3P1-201ENST00000601004 FOXD1Q16676 465 aa10.64□□□□□ -0.71
CDC42EP3P1-201ENST00000601004 SHROOM4Q9ULL8 1493 aa10.61□□□□□ -0.71
CDC42EP3P1-201ENST00000601004 UNC13AQ9UPW8 1703 aa10.57□□□□□ -0.72
CDC42EP3P1-201ENST00000601004 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
CDC42EP3P1-201ENST00000601004 BICRAQ9NZM4 1560 aa10.39□□□□□ -0.75
CDC42EP3P1-201ENST00000601004 PABPN1Q86U42 306 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDC42EP3P1-201ENST00000601004 PPP6R1Q9UPN7 881 aa10.26□□□□□ -0.77
CDC42EP3P1-201ENST00000601004 ADRA2BP18089 450 aa10.25□□□□□ -0.77
CDC42EP3P1-201ENST00000601004 BAZ1AQ9NRL2 1556 aaPredicted RBP10.21□□□□□ -0.78
CDC42EP3P1-201ENST00000601004 EIF4G1Q04637 1599 aaKnown RBP10.19□□□□□ -0.78
CDC42EP3P1-201ENST00000601004 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
CDC42EP3P1-201ENST00000601004 SMARCA4P51532 1647 aa10.13□□□□□ -0.79
CDC42EP3P1-201ENST00000601004 PEG3Q9GZU2 1588 aa10.09□□□□□ -0.79
CDC42EP3P1-201ENST00000601004 CC2D2AQ9P2K1 1620 aa10.09□□□□□ -0.79
CDC42EP3P1-201ENST00000601004 PIAS4Q8N2W9 510 aaPredicted RBP10.06□□□□□ -0.8
CDC42EP3P1-201ENST00000601004 HMGXB3Q12766 1538 aa10.05□□□□□ -0.8
CDC42EP3P1-201ENST00000601004 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
CDC42EP3P1-201ENST00000601004 CECR2Q9BXF3 1484 aa10□□□□□ -0.81
CDC42EP3P1-201ENST00000601004 ATAD2BQ9ULI0 1458 aa9.99□□□□□ -0.81
CDC42EP3P1-201ENST00000601004 BAZ1BQ9UIG0 1483 aaKnown RBP9.98□□□□□ -0.81
CDC42EP3P1-201ENST00000601004 MROH2BQ7Z745 1585 aa9.97□□□□□ -0.81
CDC42EP3P1-201ENST00000601004 RSF1Q96T23 1441 aaPredicted RBP9.94□□□□□ -0.82
CDC42EP3P1-201ENST00000601004 TOP2AP11388 1531 aaKnown RBP9.91□□□□□ -0.82
CDC42EP3P1-201ENST00000601004 WIZO95785 1651 aa9.9□□□□□ -0.82
CDC42EP3P1-201ENST00000601004 MSH5O43196 834 aa9.87□□□□□ -0.83
CDC42EP3P1-201ENST00000601004 DNAJC5BQ9UF47 199 aa9.82□□□□□ -0.84
CDC42EP3P1-201ENST00000601004 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
CDC42EP3P1-201ENST00000601004 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
CDC42EP3P1-201ENST00000601004 PDS5BQ9NTI5 1447 aa9.73□□□□□ -0.85
CDC42EP3P1-201ENST00000601004 SUPT5HO00267 1087 aaKnown RBP9.72□□□□□ -0.85
CDC42EP3P1-201ENST00000601004 CADPSQ9ULU8 1353 aa9.72□□□□□ -0.85
CDC42EP3P1-201ENST00000601004 CFTRP13569 1480 aa9.7□□□□□ -0.86
CDC42EP3P1-201ENST00000601004 CCDC88BA6NC98 1476 aa9.69□□□□□ -0.86
CDC42EP3P1-201ENST00000601004 ABCC8Q09428 1581 aa9.66□□□□□ -0.86
CDC42EP3P1-201ENST00000601004 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
CDC42EP3P1-201ENST00000601004 CEP164Q9UPV0 1460 aa9.62□□□□□ -0.87
CDC42EP3P1-201ENST00000601004 FANCD2Q9BXW9 1451 aa9.59□□□□□ -0.87
CDC42EP3P1-201ENST00000601004 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 CUX2O14529 1486 aa9.57□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 MRC2Q9UBG0 1479 aa9.56□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 NESP48681 1621 aa9.55□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 PPP4R3CPQ6ZMV5 832 aa9.53□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 WDR62O43379 1518 aa9.52□□□□□ -0.88
CDC42EP3P1-201ENST00000601004 DNMBPQ6XZF7 1577 aa9.51□□□□□ -0.89
CDC42EP3P1-201ENST00000601004 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
CDC42EP3P1-201ENST00000601004 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
CDC42EP3P1-201ENST00000601004 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
CDC42EP3P1-201ENST00000601004 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 WRNQ14191 1432 aaPredicted RBP eCLIP9.45□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 TOP2BQ02880 1626 aa9.45□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 TOPBP1Q92547 1522 aa9.44□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 IFT140Q96RY7 1462 aa9.43□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3P1-201ENST00000601004 CUX1P39880 1505 aa9.36□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 NCBP3Q53F19 620 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 FGD5Q6ZNL6 1462 aa9.35□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 SOGA1O94964 1423 aa9.35□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 ABCA10Q8WWZ4 1543 aa9.34□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 TARBP1Q13395 1621 aaKnown RBP9.34□□□□□ -0.91
CDC42EP3P1-201ENST00000601004 SYNJ1O43426 1573 aa9.33□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 KCNA4P22459 653 aa9.31□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 EEA1Q15075 1411 aa9.31□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 KIF27Q86VH2 1401 aa9.3□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 EIF4G3O43432 1585 aaKnown RBP9.29□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 MAGI1Q96QZ7 1491 aaPredicted RBP9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 MAPK8IP2Q13387 824 aaPredicted RBP9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 CNKSR2Q8WXI2 1034 aa9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 PBRM1Q86U86 1689 aa9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 ABCA5Q8WWZ7 1642 aa9.27□□□□□ -0.92
CDC42EP3P1-201ENST00000601004 CUL7Q14999 1698 aa9.27□□□□□ -0.93
CDC42EP3P1-201ENST00000601004 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
CDC42EP3P1-201ENST00000601004 RAD54L2Q9Y4B4 1467 aa9.21□□□□□ -0.93
CDC42EP3P1-201ENST00000601004 SYNJ2O15056 1496 aa9.2□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 DMRT2Q9Y5R5 561 aa9.19□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 ZNF608Q9ULD9 1512 aaPredicted RBP9.18□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 AQRO60306 1485 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 TDRD9Q8NDG6 1382 aaKnown RBP9.17□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 ADAMTS12P58397 1594 aa9.16□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 CHMP7Q8WUX9 453 aaPredicted RBP9.16□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 SNAPC4Q5SXM2 1469 aa9.15□□□□□ -0.94
CDC42EP3P1-201ENST00000601004 CHD1O14646 1710 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms