RNA–Protein interactions for RNA: ENST00000600625.5

GTPBP3-222, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene GTPBP3, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-222ENST00000600625 SIN3AQ96ST3 1273 aa27.11■■□□□ 1.93
GTPBP3-222ENST00000600625 HIRIP3Q9BW71 556 aaPredicted RBP27.11■■□□□ 1.93
GTPBP3-222ENST00000600625 ERICH6BQ5W0A0 696 aa27.11■■□□□ 1.93
GTPBP3-222ENST00000600625 TIMELESSQ9UNS1 1208 aa27.07■■□□□ 1.92
GTPBP3-222ENST00000600625 PPP4R2Q9NY27 417 aa27.06■■□□□ 1.92
GTPBP3-222ENST00000600625 HNRNPUQ00839 825 aaKnown RBP eCLIP27.05■■□□□ 1.92
GTPBP3-222ENST00000600625 SETD5Q9C0A6 1442 aa27.04■■□□□ 1.92
GTPBP3-222ENST00000600625 NOP58Q9Y2X3 529 aaKnown RBP27.04■■□□□ 1.92
GTPBP3-222ENST00000600625 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
GTPBP3-222ENST00000600625 NBR1Q14596 966 aa27.01■■□□□ 1.92
GTPBP3-222ENST00000600625 PRXQ9BXM0 1461 aa26.96■■□□□ 1.91
GTPBP3-222ENST00000600625 PAK3O75914 559 aaPredicted RBP26.91■■□□□ 1.9
GTPBP3-222ENST00000600625 SALL2Q9Y467 1007 aaPredicted RBP26.91■■□□□ 1.9
GTPBP3-222ENST00000600625 B4GALNT3Q6L9W6 998 aa26.86■■□□□ 1.89
GTPBP3-222ENST00000600625 TOP2BQ02880 1626 aa26.83■■□□□ 1.89
GTPBP3-222ENST00000600625 RTL5Q5HYW3 569 aaPredicted RBP26.8■■□□□ 1.88
GTPBP3-222ENST00000600625 ARHGAP35Q9NRY4 1499 aa26.78■■□□□ 1.88
GTPBP3-222ENST00000600625 PEG3Q9GZU2 1588 aa26.74■■□□□ 1.87
GTPBP3-222ENST00000600625 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
GTPBP3-222ENST00000600625 IPO9Q96P70 1041 aaKnown RBP26.72■■□□□ 1.87
GTPBP3-222ENST00000600625 TONSLQ96HA7 1378 aa26.71■■□□□ 1.87
GTPBP3-222ENST00000600625 IL27Q8NEV9 243 aa26.71■■□□□ 1.87
GTPBP3-222ENST00000600625 TIAM1Q13009 1591 aa26.7■■□□□ 1.86
GTPBP3-222ENST00000600625 ANP32AP39687 249 aaKnown RBP26.7■■□□□ 1.86
GTPBP3-222ENST00000600625 MAP3K1Q13233 1512 aa26.69■■□□□ 1.86
GTPBP3-222ENST00000600625 CCDC136Q96JN2 1154 aa26.67■■□□□ 1.86
GTPBP3-222ENST00000600625 PHLDB1Q86UU1 1377 aa26.67■■□□□ 1.86
GTPBP3-222ENST00000600625 BIVM-ERCC5R4GMW8 1640 aa26.67■■□□□ 1.86
GTPBP3-222ENST00000600625 ZBTB47Q9UFB7 747 aaPredicted RBP26.66■■□□□ 1.86
GTPBP3-222ENST00000600625 UNC13AQ9UPW8 1703 aa26.63■■□□□ 1.85
GTPBP3-222ENST00000600625 LRRC9Q6ZRR7 1453 aa26.62■■□□□ 1.85
GTPBP3-222ENST00000600625 RTN4Q9NQC3 1192 aaKnown RBP26.6■■□□□ 1.85
GTPBP3-222ENST00000600625 FHAD1B1AJZ9 1412 aa26.58■■□□□ 1.85
GTPBP3-222ENST00000600625 ZBED9Q6R2W3 1325 aa26.58■■□□□ 1.84
GTPBP3-222ENST00000600625 CCDC184Q52MB2 194 aa26.57■■□□□ 1.84
GTPBP3-222ENST00000600625 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
GTPBP3-222ENST00000600625 WASHC2AQ641Q2 1341 aa26.54■■□□□ 1.84
GTPBP3-222ENST00000600625 FAM9BQ8IZU0 186 aa26.52■■□□□ 1.84
GTPBP3-222ENST00000600625 UBE2Q2Q8WVN8 375 aa26.51■■□□□ 1.84
GTPBP3-222ENST00000600625 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.51■■□□□ 1.83
GTPBP3-222ENST00000600625 HSPA5P11021 654 aaKnown RBP26.44■■□□□ 1.82
GTPBP3-222ENST00000600625 MRS2Q9HD23 443 aa26.44■■□□□ 1.82
GTPBP3-222ENST00000600625 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
GTPBP3-222ENST00000600625 CNTLNQ9NXG0 1405 aa26.43■■□□□ 1.82
GTPBP3-222ENST00000600625 NCOA2Q15596 1464 aa26.42■■□□□ 1.82
GTPBP3-222ENST00000600625 PRKRIP1Q9H875 184 aaPredicted RBP26.42■■□□□ 1.82
GTPBP3-222ENST00000600625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.4■■□□□ 1.82
GTPBP3-222ENST00000600625 USP35Q9P2H5 1018 aa26.4■■□□□ 1.82
GTPBP3-222ENST00000600625 NCAPD3P42695 1498 aa26.4■■□□□ 1.82
GTPBP3-222ENST00000600625 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.81
GTPBP3-222ENST00000600625 C11orf95C9JLR9 678 aaPredicted RBP26.39■■□□□ 1.81
GTPBP3-222ENST00000600625 UACAQ9BZF9 1416 aa26.38■■□□□ 1.81
GTPBP3-222ENST00000600625 CCDC18Q5T9S5 1454 aa26.38■■□□□ 1.81
GTPBP3-222ENST00000600625 NEFMP07197 916 aa26.37■■□□□ 1.81
GTPBP3-222ENST00000600625 CFAP43Q8NDM7 1665 aa26.36■■□□□ 1.81
GTPBP3-222ENST00000600625 AKNAQ7Z591 1439 aa26.36■■□□□ 1.81
GTPBP3-222ENST00000600625 WASHC2CQ9Y4E1 1318 aa26.35■■□□□ 1.81
GTPBP3-222ENST00000600625 SMG6Q86US8 1419 aaKnown RBP26.35■■□□□ 1.81
GTPBP3-222ENST00000600625 CUX1P39880 1505 aa26.33■■□□□ 1.81
GTPBP3-222ENST00000600625 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
GTPBP3-222ENST00000600625 EIF4G2P78344 907 aaKnown RBP eCLIP26.32■■□□□ 1.8
GTPBP3-222ENST00000600625 RNF123Q5XPI4 1314 aa26.32■■□□□ 1.8
GTPBP3-222ENST00000600625 LAS1LQ9Y4W2 734 aaKnown RBP26.29■■□□□ 1.8
GTPBP3-222ENST00000600625 NUDCQ9Y266 331 aa26.27■■□□□ 1.8
GTPBP3-222ENST00000600625 HFM1A2PYH4 1435 aa26.26■■□□□ 1.79
GTPBP3-222ENST00000600625 NPM2Q86SE8 214 aaKnown RBP26.26■■□□□ 1.79
GTPBP3-222ENST00000600625 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
GTPBP3-222ENST00000600625 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
GTPBP3-222ENST00000600625 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
GTPBP3-222ENST00000600625 CCDC7Q96M83 1385 aa26.23■■□□□ 1.79
GTPBP3-222ENST00000600625 PPM1GO15355 546 aaPredicted RBP26.23■■□□□ 1.79
GTPBP3-222ENST00000600625 PTPN23Q9H3S7 1636 aa26.22■■□□□ 1.79
GTPBP3-222ENST00000600625 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
GTPBP3-222ENST00000600625 FGD6Q6ZV73 1430 aa26.19■■□□□ 1.78
GTPBP3-222ENST00000600625 BRPF3Q9ULD4 1205 aa26.18■■□□□ 1.78
GTPBP3-222ENST00000600625 IGF1RP08069 1367 aa26.17■■□□□ 1.78
GTPBP3-222ENST00000600625 AQRO60306 1485 aaKnown RBP eCLIP26.17■■□□□ 1.789e-8■■■■■ 31.6
GTPBP3-222ENST00000600625 PTPRKQ15262 1439 aa26.16■■□□□ 1.78
GTPBP3-222ENST00000600625 TCERG1O14776 1098 aaKnown RBP26.14■■□□□ 1.78
GTPBP3-222ENST00000600625 NAIPQ13075 1403 aa26.14■■□□□ 1.77
GTPBP3-222ENST00000600625 EIF5BO60841 1220 aaKnown RBP26.14■■□□□ 1.77
GTPBP3-222ENST00000600625 P3H3Q8IVL6 736 aa26.13■■□□□ 1.77
GTPBP3-222ENST00000600625 PDE4AP27815 886 aa26.12■■□□□ 1.77
GTPBP3-222ENST00000600625 GSE1Q14687 1217 aa26.11■■□□□ 1.77
GTPBP3-222ENST00000600625 FMN1Q68DA7 1419 aa26.1■■□□□ 1.77
GTPBP3-222ENST00000600625 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
GTPBP3-222ENST00000600625 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
GTPBP3-222ENST00000600625 BACH2Q9BYV9 841 aa26.07■■□□□ 1.76
GTPBP3-222ENST00000600625 KIF7Q2M1P5 1343 aa26.03■■□□□ 1.76
GTPBP3-222ENST00000600625 CASKIN1Q8WXD9 1431 aa26.03■■□□□ 1.76
GTPBP3-222ENST00000600625 MS4A1P11836 297 aa26.02■■□□□ 1.76
GTPBP3-222ENST00000600625 L3MBTL2Q969R5 705 aa26.01■■□□□ 1.75
GTPBP3-222ENST00000600625 FHOD3Q2V2M9 1422 aa26.01■■□□□ 1.75
GTPBP3-222ENST00000600625 ABCA5Q8WWZ7 1642 aa25.99■■□□□ 1.75
GTPBP3-222ENST00000600625 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
GTPBP3-222ENST00000600625 DDRGK1Q96HY6 314 aa25.97■■□□□ 1.75
GTPBP3-222ENST00000600625 DENND4BO75064 1496 aaPredicted RBP25.96■■□□□ 1.75
GTPBP3-222ENST00000600625 EXOC6Q8TAG9 804 aa25.95■■□□□ 1.75
GTPBP3-222ENST00000600625 NFKBIBQ15653 356 aa25.95■■□□□ 1.74
GTPBP3-222ENST00000600625 FRAT1Q92837 279 aaPredicted RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms