RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
LTBP4-228ENST00000600499 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
LTBP4-228ENST00000600499 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
LTBP4-228ENST00000600499 JPH4Q96JJ6 628 aa24.3■■□□□ 1.48
LTBP4-228ENST00000600499 KIF21BO75037 1637 aa24.26■■□□□ 1.47
LTBP4-228ENST00000600499 FAM9AQ8IZU1 332 aaPredicted RBP24.25■■□□□ 1.47
LTBP4-228ENST00000600499 IQGAP2Q13576 1575 aa24.24■■□□□ 1.47
LTBP4-228ENST00000600499 ARAP1Q96P48 1450 aa24.22■■□□□ 1.47
LTBP4-228ENST00000600499 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
LTBP4-228ENST00000600499 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
LTBP4-228ENST00000600499 CTTNBP2Q8WZ74 1663 aa24.19■■□□□ 1.46
LTBP4-228ENST00000600499 UGGT2Q9NYU1 1516 aa24.17■■□□□ 1.46
LTBP4-228ENST00000600499 CYB5RLQ6IPT4 315 aa24.1■■□□□ 1.45
LTBP4-228ENST00000600499 GOLGA3Q08378 1498 aa24.09■■□□□ 1.45
LTBP4-228ENST00000600499 DISP1Q96F81 1524 aa24.09■■□□□ 1.45
LTBP4-228ENST00000600499 CARMIL2Q6F5E8 1435 aa24.08■■□□□ 1.44
LTBP4-228ENST00000600499 KIAA0556O60303 1618 aa24.01■■□□□ 1.43
LTBP4-228ENST00000600499 TNIKQ9UKE5 1360 aa24.01■■□□□ 1.43
LTBP4-228ENST00000600499 PTPRGP23470 1445 aa23.95■■□□□ 1.42
LTBP4-228ENST00000600499 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
LTBP4-228ENST00000600499 UBTFP17480 764 aaKnown RBP23.94■■□□□ 1.42
LTBP4-228ENST00000600499 EFCAB5A4FU69 1503 aa23.87■■□□□ 1.41
LTBP4-228ENST00000600499 UHRF1BP1LA0JNW5 1464 aa23.85■■□□□ 1.41
LTBP4-228ENST00000600499 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
LTBP4-228ENST00000600499 ADCY10Q96PN6 1610 aa23.83■■□□□ 1.41
LTBP4-228ENST00000600499 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
LTBP4-228ENST00000600499 ABCC2Q92887 1545 aa23.78■■□□□ 1.4
LTBP4-228ENST00000600499 ARHGAP35Q9NRY4 1499 aa23.77■■□□□ 1.4
LTBP4-228ENST00000600499 ABCA8O94911 1581 aa23.77■■□□□ 1.4
LTBP4-228ENST00000600499 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
LTBP4-228ENST00000600499 FHOD3Q2V2M9 1422 aa23.74■■□□□ 1.39
LTBP4-228ENST00000600499 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
LTBP4-228ENST00000600499 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
LTBP4-228ENST00000600499 KDM5BQ9UGL1 1544 aa23.72■■□□□ 1.39
LTBP4-228ENST00000600499 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
LTBP4-228ENST00000600499 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
LTBP4-228ENST00000600499 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
LTBP4-228ENST00000600499 LOC105371045A0A1W2PR82 267 aa23.67■■□□□ 1.38
LTBP4-228ENST00000600499 CLIP1P30622 1438 aa23.65■■□□□ 1.38
LTBP4-228ENST00000600499 FMN1Q68DA7 1419 aa23.64■■□□□ 1.37
LTBP4-228ENST00000600499 RAPGEF6Q8TEU7 1601 aa23.63■■□□□ 1.37
LTBP4-228ENST00000600499 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
LTBP4-228ENST00000600499 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
LTBP4-228ENST00000600499 NUP153P49790 1475 aaKnown RBP23.57■■□□□ 1.36
LTBP4-228ENST00000600499 ATP10BO94823 1461 aa23.56■■□□□ 1.36
LTBP4-228ENST00000600499 ASXL2Q76L83 1435 aa23.55■■□□□ 1.36
LTBP4-228ENST00000600499 ABCC10Q5T3U5 1492 aa23.55■■□□□ 1.36
LTBP4-228ENST00000600499 CASKIN1Q8WXD9 1431 aa23.49■■□□□ 1.35
LTBP4-228ENST00000600499 DIP2BQ9P265 1576 aa23.48■■□□□ 1.35
LTBP4-228ENST00000600499 TRHP20396 242 aaPredicted RBP23.48■■□□□ 1.35
LTBP4-228ENST00000600499 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
LTBP4-228ENST00000600499 WDR7Q9Y4E6 1490 aa23.47■■□□□ 1.35
LTBP4-228ENST00000600499 HECW1Q76N89 1606 aa23.47■■□□□ 1.35
LTBP4-228ENST00000600499 GLI2P10070 1586 aa23.45■■□□□ 1.34
LTBP4-228ENST00000600499 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
LTBP4-228ENST00000600499 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
LTBP4-228ENST00000600499 PCF11O94913 1555 aaKnown RBP23.41■■□□□ 1.34
LTBP4-228ENST00000600499 FAM69CQ0P6D2 419 aa23.41■■□□□ 1.34
LTBP4-228ENST00000600499 ARID3CA6NKF2 412 aa23.37■■□□□ 1.33
LTBP4-228ENST00000600499 CDK13Q14004 1512 aaKnown RBP23.37■■□□□ 1.33
LTBP4-228ENST00000600499 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
LTBP4-228ENST00000600499 CCDC18Q5T9S5 1454 aa23.36■■□□□ 1.33
LTBP4-228ENST00000600499 PLEKHD1A6NEE1 506 aa23.34■■□□□ 1.33
LTBP4-228ENST00000600499 VPS8Q8N3P4 1428 aa23.33■■□□□ 1.32
LTBP4-228ENST00000600499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.32■■□□□ 1.32
LTBP4-228ENST00000600499 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
LTBP4-228ENST00000600499 MAP3K4Q9Y6R4 1608 aa23.31■■□□□ 1.32
LTBP4-228ENST00000600499 ATP1B4Q9UN42 357 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-228ENST00000600499 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-228ENST00000600499 ABCA9Q8IUA7 1624 aa23.27■■□□□ 1.32
LTBP4-228ENST00000600499 KCNH8Q96L42 1107 aa23.27■■□□□ 1.32
LTBP4-228ENST00000600499 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.32
LTBP4-228ENST00000600499 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
LTBP4-228ENST00000600499 TROQ12816 1431 aaPredicted RBP23.25■■□□□ 1.31
LTBP4-228ENST00000600499 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
LTBP4-228ENST00000600499 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
LTBP4-228ENST00000600499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.19■■□□□ 1.3
LTBP4-228ENST00000600499 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
LTBP4-228ENST00000600499 TEX14Q8IWB6 1497 aa23.17■■□□□ 1.3
LTBP4-228ENST00000600499 TSPOAP1O95153 1857 aa23.17■■□□□ 1.3
LTBP4-228ENST00000600499 KIF14Q15058 1648 aa23.13■■□□□ 1.29
LTBP4-228ENST00000600499 TIAM1Q13009 1591 aa23.13■■□□□ 1.29
LTBP4-228ENST00000600499 TTC37Q6PGP7 1564 aa23.13■■□□□ 1.29
LTBP4-228ENST00000600499 ARAP3Q8WWN8 1544 aa23.1■■□□□ 1.29
LTBP4-228ENST00000600499 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
LTBP4-228ENST00000600499 PLCH2O75038 1416 aa23.08■■□□□ 1.29
LTBP4-228ENST00000600499 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.29
LTBP4-228ENST00000600499 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
LTBP4-228ENST00000600499 NEO1Q92859 1461 aa23.07■■□□□ 1.28
LTBP4-228ENST00000600499 LRRC9Q6ZRR7 1453 aa23.04■■□□□ 1.28
LTBP4-228ENST00000600499 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
LTBP4-228ENST00000600499 COL17A1Q9UMD9 1497 aaPredicted RBP23.02■■□□□ 1.28
LTBP4-228ENST00000600499 KDM6BO15054 1643 aa23.01■■□□□ 1.27
LTBP4-228ENST00000600499 FANCAO15360 1455 aa23■■□□□ 1.27
LTBP4-228ENST00000600499 CFAP74Q9C0B2 1584 aa23■■□□□ 1.27
LTBP4-228ENST00000600499 GPATCH8Q9UKJ3 1502 aaKnown RBP22.98■■□□□ 1.27
LTBP4-228ENST00000600499 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
LTBP4-228ENST00000600499 CDC42BPBQ9Y5S2 1711 aa22.97■■□□□ 1.27
LTBP4-228ENST00000600499 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
LTBP4-228ENST00000600499 AKNAQ7Z591 1439 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms